Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 1.2e-68 263.1 134 100.0
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 2.7e-65 251.9 134 95.5
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 4.0e-56 221.5 164 74.4
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 2.6e-55 218.8 163 74.2
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 3.4e-55 218.4 164 73.8
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 3.4e-55 218.4 164 73.8
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 7.5e-55 217.2 163 73.6
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 7.5e-55 217.2 163 73.6
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 9.8e-55 216.9 162 74.1
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 9.8e-55 216.9 163 74.2
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 1.6e-52 209.5 163 72.4
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 4.5e-52 208.0 163 71.2
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 1.0e-51 206.8 163 70.6
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 1.3e-51 206.5 163 71.2
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 7.5e-47 190.7 163 66.9
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 1.3e-46 189.9 163 67.5
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 9.5e-42 173.7 163 61.3
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 3.6e-41 171.8 143 67.8
BraA02t09007Z Brassica rapa HOM05D006088 ORTHO05D007281 3.7e-38 161.8 88 93.2
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 7.0e-37 157.5 159 56.6
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 1.2e-36 156.8 159 56.6
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 2.7e-36 155.6 165 53.9
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 1.0e-35 153.7 165 53.9
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 8.6e-35 150.6 159 56.0
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 5.6e-34 147.9 165 53.3
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 5.6e-34 147.9 148 55.4
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 7.3e-34 147.5 154 55.8
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 9.5e-34 147.1 153 53.6
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 1.2e-33 146.7 162 52.5
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 1.2e-33 146.7 150 56.0
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 1.6e-33 146.4 144 56.2
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 2.8e-33 145.6 154 54.5
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 1.0e-32 143.7 162 52.5
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 1.8e-32 142.9 161 52.2
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 2.3e-32 142.5 156 51.9
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 4.0e-32 141.7 156 51.9
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 6.8e-32 141.0 162 51.9
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 8.9e-32 140.6 141 56.0
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 8.9e-32 140.6 164 51.8
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 1.5e-31 139.8 148 53.4
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 1.5e-31 139.8 156 50.0
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 2.6e-31 139.0 146 52.7
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 2.6e-31 139.0 161 52.2
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 2.6e-31 139.0 152 52.0
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 3.4e-31 138.7 154 50.6
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 3.4e-31 138.7 156 51.3
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 4.4e-31 138.3 162 51.2
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 4.4e-31 138.3 145 52.4
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 4.4e-31 138.3 163 51.5
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 5.8e-31 137.9 146 53.4
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 5.8e-31 137.9 146 53.4
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 9.8e-31 137.1 154 50.6
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 1.7e-30 136.3 141 53.9
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 1.7e-30 136.3 141 55.3
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 1.7e-30 136.3 141 55.3
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 2.2e-30 136.0 142 56.3
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 3.7e-30 135.2 158 48.7
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 4.9e-30 134.8 143 53.8
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 6.4e-30 134.4 141 54.6
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 8.3e-30 134.0 156 50.0
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 8.3e-30 134.0 146 52.1
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 1.1e-29 133.7 149 52.3
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 1.4e-29 133.3 160 51.2
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 1.9e-29 132.9 157 49.7
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 2.4e-29 132.5 176 46.6
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 5.4e-29 131.3 140 51.4
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 7.0e-29 131.0 157 50.3
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 7.0e-29 131.0 144 53.5
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 7.0e-29 131.0 137 52.6
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 9.2e-29 130.6 157 49.7
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 1.2e-28 130.2 157 49.0
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 1.6e-28 129.8 142 52.8
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 1.6e-28 129.8 157 50.3
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 3.5e-28 128.6 117 65.8
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.5e-28 128.6 157 49.7
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 3.5e-28 128.6 157 47.8
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 4.6e-28 128.3 157 49.7
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 4.6e-28 128.3 157 49.7
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 7.8e-28 127.5 154 50.0
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 7.8e-28 127.5 153 49.0
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 1.0e-27 127.1 156 50.0
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 2.3e-27 125.9 141 53.2
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 3.0e-27 125.6 157 49.0
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 3.0e-27 125.6 146 50.7
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 3.9e-27 125.2 156 50.0
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 5.0e-27 124.8 157 45.9
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 5.0e-27 124.8 139 50.4
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 6.6e-27 124.4 141 48.2
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 6.6e-27 124.4 154 48.7
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 1.1e-26 123.6 143 50.3
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 1.5e-26 123.2 151 48.3
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.5e-26 122.5 157 48.4
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 7.3e-26 120.9 151 47.7
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 1.2e-25 120.2 139 48.2
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 2.8e-25 119.0 94 72.3
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 3.6e-25 118.6 144 47.9
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 8.1e-25 117.5 133 49.6
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 8.1e-25 117.5 189 40.2
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 1.1e-24 117.1 136 49.3
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 1.4e-24 116.7 144 48.6
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 5.2e-24 114.8 161 42.2
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 6.8e-24 114.4 134 50.0
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 8.9e-24 114.0 147 46.9
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 1.7e-22 109.8 158 42.4
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.2e-20 103.6 136 44.1
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 4.3e-18 95.1 148 41.2
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 4.3e-18 95.1 113 47.8
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 1.2e-17 93.6 129 44.2
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 1.2e-17 93.6 129 44.2
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 2.8e-17 92.4 78 57.7
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 4.7e-17 91.7 117 46.2
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 5.2e-16 88.2 137 38.0
CDE11G0933 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 8.4e-14 80.9 65 60.0
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 1.1e-13 80.5 142 36.6
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 1.9e-13 79.7 137 38.0
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 2.1e-12 76.3 127 40.9
TWI14G0770 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 2.7e-12 75.9 70 58.6
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 3.0e-11 72.4 120 41.7
Lsat_1_v5_gn_7_72820 Lactuca sativa HOM05D006088 ORTHO05D007281 3.1e-08 62.4 90 40.0
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 5.2e-08 61.6 78 44.9
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 1.2e-07 60.5 115 34.8
BraA02t09006Z Brassica rapa HOM05D006088 ORTHO05D007281 2.2e-06 56.2 28 96.4


User provided reference genes

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