Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40400 Brassica napus HOM05D011679 ORTHO05D012451 4.4e-109 397.9 191 100.0
A02p40630 Brassica napus HOM05D011679 ORTHO05D012451 1.9e-104 382.5 191 96.3
BraA02t09010Z Brassica rapa HOM05D011679 ORTHO05D012451 9.5e-104 380.2 198 93.9
A02p40520 Brassica napus HOM05D011679 ORTHO05D012451 8.0e-103 377.1 192 95.8
BolC2t12090H Brassica oleracea HOM05D011679 ORTHO05D012451 5.1e-65 251.5 172 73.8
C02p60340 Brassica napus HOM05D011679 ORTHO05D012451 1.5e-64 250.0 123 97.6
BolC2t12252H Brassica oleracea HOM05D011679 ORTHO05D012451 6.1e-42 174.9 170 55.9
BcaB07g29904 Brassica carinata HOM05D011679 ORTHO05D012451 8.2e-31 137.9 94 72.3
BcaB07g29835 Brassica carinata HOM05D011679 ORTHO05D012451 1.4e-30 137.1 103 67.0
Carub.0001s2895 Capsella rubella HOM05D011679 ORTHO05D012451 9.7e-24 114.4 163 39.3
CARHR166160 Cardamine hirsuta HOM05D011679 ORTHO05D012451 8.8e-17 91.3 163 37.4
AL3G32470 Arabidopsis lyrata HOM05D011679 ORTHO05D012451 8.2e-15 84.7 163 33.1
CARHR167770 Cardamine hirsuta HOM05D001456 ORTHO05D011781 7.7e-13 78.2 163 35.0
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 7.2e-11 71.6 133 37.6
Carub.0001s2894 Capsella rubella HOM05D025627 ORTHO05D012451 2.7e-10 69.7 166 28.3
AL5G20620 Arabidopsis lyrata HOM05D001456 ORTHO05D019698 3.0e-09 66.2 175 29.1
CARHR172830 Cardamine hirsuta HOM05D001456 ORTHO05D011865 5.2e-09 65.5 133 31.6
C06p00010 Brassica napus HOM05D014685 ORTHO05D011865 8.8e-09 64.7 124 33.9
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.6e-08 63.2 169 27.2
AL5G20610 Arabidopsis lyrata HOM05D001456 ORTHO05D019698 2.6e-08 63.2 163 28.8
AL1G58410 Arabidopsis lyrata HOM05D021205 ORTHO05D010099 3.4e-08 62.8 149 30.9
Carub.0001s3469 Capsella rubella HOM05D001456 ORTHO05D010099 4.4e-08 62.4 120 34.2
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 5.7e-08 62.0 136 30.1
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 7.5e-08 61.6 167 27.5
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 9.8e-08 61.2 163 28.2
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 9.8e-08 61.2 163 28.2
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 9.8e-08 61.2 168 28.6
AL5G39260 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 1.3e-07 60.8 133 34.6
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-07 60.5 136 29.4
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-07 60.5 136 29.4
PGR031G2409 Punica granatum HOM05D001456 ORTHO05D002799 3.7e-07 59.3 175 25.1
Sed0015340 Sechium edule HOM05D001456 ORTHO05D002799 3.7e-07 59.3 175 25.7
PGR031G1599 Punica granatum HOM05D001456 ORTHO05D002799 4.8e-07 58.9 175 25.1
PGR031G3460 Punica granatum HOM05D001456 ORTHO05D002799 4.8e-07 58.9 175 25.1
AL5G41570 Arabidopsis lyrata HOM05D001456 ORTHO05D011865 1.1e-06 57.8 113 33.6
A09p52620 Brassica napus HOM05D001456 ORTHO05D011781 1.1e-06 57.8 172 25.6
CARHR274920 Cardamine hirsuta HOM05D001456 ORTHO05D002799 1.1e-06 57.8 162 26.5
BraA09t40691Z Brassica rapa HOM05D001456 ORTHO05D011781 1.4e-06 57.4 164 26.8
Atru.chr5.892 Acer truncatum HOM05D001456 ORTHO05D002799 1.8e-06 57.0 175 24.6
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 1.8e-06 57.0 131 32.8
ClCG01G007140 Citrullus lanatus HOM05D001456 ORTHO05D002799 2.4e-06 56.6 175 25.7
MELO3C005198.2 Cucumis melo HOM05D001456 ORTHO05D002799 3.1e-06 56.2 175 25.1
Thhalv10006280m.g Eutrema salsugineum HOM05D014685 ORTHO05D011865 3.1e-06 56.2 110 31.8
C09p72960 Brassica napus HOM05D021205 ORTHO05D031731 4.1e-06 55.8 90 30.0
BolC9t60032H Brassica oleracea HOM05D021205 ORTHO05D031731 4.1e-06 55.8 90 30.0
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 5.4e-06 55.5 161 27.3


User provided reference genes

Program Settings