Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 5.1e-119 431.0 209 100.0
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 7.4e-102 374.0 238 80.3
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 2.8e-101 372.1 238 79.8
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 6.3e-101 370.9 238 79.0
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 2.2e-98 362.5 238 78.6
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 2.2e-98 362.5 238 78.6
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 1.1e-97 360.1 238 78.2
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 3.0e-95 352.1 238 77.3
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 3.3e-94 348.6 242 75.6
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 2.2e-93 345.9 238 76.1
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 1.3e-90 336.7 238 73.5
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 9.4e-89 330.5 238 73.1
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 4.7e-88 328.2 238 71.8
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 3.4e-86 322.0 238 70.2
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 7.5e-86 320.9 238 71.0
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 7.5e-86 320.9 218 76.6
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 2.6e-78 295.8 239 63.6
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 4.4e-78 295.0 239 64.0
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 1.3e-77 293.5 241 61.8
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 2.8e-77 292.4 241 61.8
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 1.8e-76 289.7 237 62.4
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 3.1e-76 288.9 239 61.9
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 5.4e-76 288.1 238 62.6
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 1.2e-75 287.0 239 61.9
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 1.6e-75 286.6 238 62.2
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 2.7e-75 285.8 235 63.8
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 4.5e-75 285.0 238 63.0
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 1.7e-74 283.1 238 60.9
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 3.9e-74 282.0 238 60.9
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 6.6e-74 281.2 236 61.4
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 8.6e-74 280.8 237 61.2
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 1.1e-73 280.4 234 61.1
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 1.5e-73 280.0 236 62.7
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 2.5e-73 279.3 236 60.2
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 2.5e-73 279.3 238 60.1
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 3.3e-73 278.9 239 61.9
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 3.3e-73 278.9 236 61.9
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 4.3e-73 278.5 233 60.5
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 7.3e-73 277.7 222 62.6
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 9.5e-73 277.3 237 59.9
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 1.2e-72 276.9 236 61.4
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 1.2e-72 276.9 238 59.7
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 1.6e-72 276.6 239 59.8
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 1.6e-72 276.6 234 60.7
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 2.1e-72 276.2 238 61.8
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 2.8e-72 275.8 232 62.1
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 6.1e-72 274.6 235 59.1
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 6.1e-72 274.6 236 61.0
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 8.0e-72 274.2 237 61.6
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 1.8e-71 273.1 236 60.2
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 2.3e-71 272.7 236 58.5
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 3.1e-71 272.3 237 59.9
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 4.0e-71 271.9 236 61.0
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 6.8e-71 271.2 238 59.7
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 6.8e-71 271.2 239 59.8
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 8.9e-71 270.8 237 59.5
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 2.0e-70 269.6 242 57.9
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 4.4e-70 268.5 237 59.5
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 4.4e-70 268.5 236 58.5
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 5.8e-70 268.1 234 57.3
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 5.8e-70 268.1 235 59.6
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 5.8e-70 268.1 236 58.9
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 7.5e-70 267.7 233 59.7
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 9.8e-70 267.3 237 59.5
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.7e-69 265.4 236 58.9
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.7e-69 265.4 236 58.9
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.7e-69 265.4 236 58.9
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 4.9e-69 265.0 234 59.0
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 8.3e-69 264.2 237 58.2
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 1.1e-68 263.8 235 57.9
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.1e-68 263.8 236 58.5
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 1.9e-68 263.1 239 57.7
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.9e-68 263.1 236 58.5
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 3.2e-68 262.3 236 57.6
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 3.2e-68 262.3 236 59.3
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 1.6e-67 260.0 234 56.0
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 3.9e-66 255.4 239 56.9
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 1.9e-65 253.1 237 55.7
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 3.3e-65 252.3 232 54.7
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 9.5e-65 250.8 232 56.9
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 3.6e-64 248.8 279 50.9
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 6.2e-64 248.1 219 59.4
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 6.2e-64 248.1 235 52.8
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 6.2e-64 248.1 237 54.0
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 8.0e-64 247.7 234 54.3
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 2.3e-63 246.1 216 59.7
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 2.9e-61 239.2 225 56.0
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 4.9e-61 238.4 217 57.1
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 8.3e-61 237.7 219 57.1
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 8.3e-61 237.7 212 59.0
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 1.4e-60 236.9 218 56.0
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 1.6e-59 233.4 216 55.1
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 6.6e-58 228.0 219 54.8
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 1.1e-57 227.3 213 56.8
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 3.3e-57 225.7 235 52.3
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 5.8e-54 214.9 222 55.4
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 1.4e-47 193.7 203 50.7
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 1.1e-44 184.1 240 45.0
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 1.3e-42 177.2 195 49.7
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 4.3e-41 172.2 195 48.7
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 5.6e-41 171.8 115 75.7
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 5.6e-41 171.8 214 48.6
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 1.8e-39 166.8 216 47.7
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 1.2e-38 164.1 230 41.3
VMungo0647G0665 Vigna mungo HOM05D006088 ORTHO05D007281 1.5e-38 163.7 89 80.9
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 2.0e-38 163.3 231 41.6
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 1.6e-35 153.7 232 35.3
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 8.1e-32 141.4 195 43.1
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 1.4e-31 140.6 188 41.5
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 1.3e-29 134.0 115 58.3
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 4.9e-29 132.1 114 62.3
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 6.4e-29 131.7 114 59.6
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 2.7e-27 126.3 117 65.8
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 2.3e-26 123.2 103 57.3
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 1.5e-25 120.6 117 63.2
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 6.2e-24 115.2 99 58.6
BraA02t09007Z Brassica rapa HOM05D006088 ORTHO05D007281 1.2e-22 110.9 97 64.9
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 3.4e-22 109.4 209 34.4
Dinv35357 Davidia involucrata HOM05D006088 ORTHO05D007281 1.4e-20 104.0 61 75.4
A02p40600 Brassica napus HOM05D006088 ORTHO05D007281 5.8e-14 82.0 35 97.1
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 1.5e-09 67.4 96 47.9
CDE11G0933 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 3.4e-06 56.2 150 32.0


User provided reference genes

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