Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 5.1e-142 508.1 320 100.0
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 5.8e-138 494.6 320 98.4
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 2.5e-133 479.2 320 95.6
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 2.1e-132 476.1 320 95.0
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 2.0e-106 389.8 273 94.9
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 2.6e-90 336.3 277 87.0
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 8.8e-78 294.7 308 60.4
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 9.4e-72 274.6 294 60.9
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 1.2e-71 274.2 308 57.5
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 2.2e-65 253.4 307 55.4
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 2.2e-65 253.4 312 57.1
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 9.4e-64 248.1 305 53.4
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 1.5e-61 240.7 311 54.0
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 9.2e-51 204.9 293 46.1
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 3.9e-25 119.8 323 34.7
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.5e-21 107.8 242 41.7
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 1.5e-21 107.8 243 37.0
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 2.6e-21 107.1 282 41.5
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 5.8e-21 105.9 245 41.2
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 5.8e-21 105.9 298 36.2
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 7.6e-21 105.5 299 35.8
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 7.6e-21 105.5 299 35.8
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 6.4e-20 102.4 282 35.1
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 3.2e-19 100.1 235 35.3
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.4e-19 99.4 204 35.3
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 5.4e-19 99.4 204 34.8
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 7.1e-19 99.0 204 34.8
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 9.2e-19 98.6 200 38.0
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 1.2e-18 98.2 210 32.4
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.2e-18 98.2 209 35.9
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 1.6e-18 97.8 220 33.2
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 2.1e-18 97.4 279 31.2
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 2.1e-18 97.4 220 33.2
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.7e-18 97.1 226 32.3
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.7e-18 97.1 226 32.3
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.7e-18 97.1 226 32.3
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 3.5e-18 96.7 288 34.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 3.5e-18 96.7 262 33.6
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 7.8e-18 95.5 218 44.0
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.0e-17 95.1 240 38.8
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.3e-17 94.7 299 36.1
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.9e-17 93.2 204 43.6
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 3.9e-17 93.2 254 31.5
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 5.1e-17 92.8 201 34.3
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 6.6e-17 92.4 238 37.0
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 6.6e-17 92.4 209 45.9
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.1e-16 91.7 252 32.5
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 1.5e-16 91.3 239 32.6
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 4.3e-16 89.7 262 29.4
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 5.6e-16 89.4 227 32.2
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 1.2e-15 88.2 227 32.2
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.6e-15 87.8 237 38.0
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 1.6e-15 87.8 237 32.1
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 2.1e-15 87.4 290 29.3
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 2.8e-15 87.0 239 40.6
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.8e-15 87.0 275 32.7
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 4.7e-15 86.3 208 32.7
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 4.7e-15 86.3 210 34.3
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 6.2e-15 85.9 237 32.9
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.1e-14 85.1 211 35.5
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 1.8e-14 84.3 213 33.8
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 1.8e-14 84.3 256 30.5
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 2.4e-14 84.0 200 33.5
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 3.1e-14 83.6 210 35.7
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 4.0e-14 83.2 272 32.7
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 5.2e-14 82.8 218 31.2
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 9.0e-14 82.0 205 32.7
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 1.5e-13 81.3 210 32.4
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 2.0e-13 80.9 241 34.0
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 2.6e-13 80.5 218 32.1
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 4.4e-13 79.7 202 32.7
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 7.6e-13 79.0 242 29.8
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 2.2e-12 77.4 274 29.2
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 2.9e-12 77.0 202 32.7
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 2.9e-12 77.0 233 31.8
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 3.8e-12 76.6 221 32.6
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 4.9e-12 76.3 209 33.0
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 4.9e-12 76.3 222 31.5
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 4.9e-12 76.3 203 31.0
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 4.9e-12 76.3 212 31.6
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 4.9e-12 76.3 246 30.1
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 6.4e-12 75.9 239 29.3
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 6.4e-12 75.9 146 38.4
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 1.1e-11 75.1 210 31.9
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.4e-11 74.7 218 39.0
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 2.4e-11 73.9 108 41.7
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 3.2e-11 73.6 241 30.3
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 1.2e-10 71.6 92 46.7
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 1.6e-10 71.2 238 46.2
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 1.6e-10 71.2 209 30.6
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 2.1e-10 70.9 212 31.1
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 3.5e-10 70.1 258 28.3
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 4.6e-10 69.7 162 34.6
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.0e-10 69.3 258 28.3
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 6.0e-10 69.3 153 34.6
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.3e-09 68.2 272 29.4
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 2.3e-09 67.4 224 36.6
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 3.0e-09 67.0 298 26.8
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 3.0e-09 67.0 207 37.2
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 5.1e-09 66.2 215 29.8
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.1e-08 65.1 212 30.7
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 9.6e-08 62.0 226 28.3
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 1.3e-07 61.6 254 28.0
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 2.4e-06 57.4 209 29.2
ECA233G0397 Erigeron canadensis HOM05D003457 ORTHO05D009249 3.1e-06 57.0 202 36.6


User provided reference genes

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