Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 1.5e-83 312.8 149 100.0
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 1.2e-82 309.7 149 98.7
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 1.2e-82 309.7 149 98.7
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 1.2e-82 309.7 149 98.7
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 2.1e-82 308.9 149 98.0
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 4.4e-72 274.6 150 90.0
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 5.9e-69 264.2 150 88.0
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 5.9e-69 264.2 150 88.0
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 2.3e-68 262.3 150 85.3
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 1.1e-67 260.0 149 85.9
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 1.1e-67 260.0 149 85.9
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 1.1e-67 260.0 149 85.9
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.1e-67 260.0 152 84.9
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 3.2e-67 258.5 152 84.2
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 1.8e-65 252.7 150 83.3
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.8e-65 252.7 148 85.1
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 1.5e-64 249.6 152 82.9
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 8.3e-63 243.8 149 80.5
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 3.5e-61 238.4 150 78.7
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 2.3e-60 235.7 154 79.2
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 5.0e-60 234.6 150 78.0
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 5.0e-60 234.6 150 77.3
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 1.1e-59 233.4 150 78.0
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 4.3e-59 231.5 150 77.3
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 2.8e-58 228.8 150 77.3
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 1.4e-57 226.5 150 74.0
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 1.4e-57 226.5 150 75.3
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 4.0e-57 224.9 150 75.3
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 8.9e-57 223.8 150 73.3
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.2e-56 223.4 151 75.5
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 2.0e-56 222.6 150 72.0
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 2.6e-56 222.2 150 73.3
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 3.4e-56 221.9 150 72.7
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 7.5e-56 220.7 150 71.3
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 1.7e-55 219.5 152 73.7
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 1.7e-55 219.5 150 71.3
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 2.2e-55 219.2 151 77.5
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 2.2e-55 219.2 151 77.5
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 2.2e-55 219.2 150 72.0
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 4.9e-55 218.0 151 76.8
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 4.9e-55 218.0 151 76.8
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 6.4e-55 217.6 150 71.3
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 6.4e-55 217.6 150 71.3
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 6.4e-55 217.6 150 70.7
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 8.3e-55 217.2 151 74.2
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 8.3e-55 217.2 150 70.7
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 8.3e-55 217.2 150 70.7
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 1.4e-54 216.5 150 70.7
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 2.4e-54 215.7 150 70.0
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 2.4e-54 215.7 148 70.9
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 2.4e-54 215.7 150 70.7
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 5.4e-54 214.5 150 71.3
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 5.4e-54 214.5 150 71.3
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 7.0e-54 214.2 150 70.7
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 1.2e-53 213.4 150 70.0
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 1.6e-53 213.0 150 70.7
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 1.6e-53 213.0 150 70.7
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 1.6e-53 213.0 151 69.5
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 2.0e-53 212.6 150 71.3
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 2.0e-53 212.6 150 71.3
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 2.0e-53 212.6 150 69.3
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 2.7e-53 212.2 150 68.0
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 2.7e-53 212.2 150 71.3
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 2.7e-53 212.2 150 69.3
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 4.6e-53 211.5 150 70.0
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 1.0e-52 210.3 150 68.0
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 1.7e-52 209.5 150 70.0
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 3.0e-52 208.8 150 68.7
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 3.0e-52 208.8 150 69.3
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 3.9e-52 208.4 150 68.0
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 5.0e-52 208.0 150 68.7
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 5.0e-52 208.0 137 73.0
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 8.6e-52 207.2 150 68.0
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 1.1e-51 206.8 142 74.6
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 1.1e-51 206.8 152 68.4
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 1.5e-51 206.5 135 76.3
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 1.5e-51 206.5 150 70.7
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 1.5e-51 206.5 151 68.9
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 1.5e-51 206.5 151 68.9
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 2.5e-51 205.7 150 66.0
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 3.3e-51 205.3 150 66.7
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 4.3e-51 204.9 150 67.3
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 5.6e-51 204.5 150 67.3
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 7.3e-51 204.1 150 67.3
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 9.5e-51 203.8 150 68.7
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 9.5e-51 203.8 150 68.7
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.2e-50 203.4 150 67.3
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 1.2e-50 203.4 150 68.0
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 1.2e-50 203.4 150 66.7
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 1.6e-50 203.0 150 67.3
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 1.6e-50 203.0 150 66.0
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 2.1e-50 202.6 150 66.7
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 2.1e-50 202.6 150 66.7
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 2.1e-50 202.6 150 66.7
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 2.8e-50 202.2 150 68.0
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 2.8e-50 202.2 150 68.0
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.8e-50 202.2 150 68.7
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.8e-50 202.2 150 68.0
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 3.6e-50 201.8 150 66.7
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 4.7e-50 201.4 153 67.3
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 4.7e-50 201.4 150 67.3
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 6.2e-50 201.1 152 68.4
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 6.2e-50 201.1 150 67.3
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 6.2e-50 201.1 150 67.3
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 8.0e-50 200.7 150 66.0
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 1.4e-49 199.9 150 66.7
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 1.4e-49 199.9 150 66.0
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 1.4e-49 199.9 150 66.0
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 1.4e-49 199.9 150 65.3
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 1.8e-49 199.5 150 66.0
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 3.1e-49 198.7 150 66.0
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 3.1e-49 198.7 150 64.0
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 3.1e-49 198.7 150 64.7
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 6.8e-49 197.6 144 68.8
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 2.0e-48 196.1 150 64.7
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 2.6e-48 195.7 150 64.7
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 2.6e-48 195.7 150 64.0
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 2.6e-48 195.7 155 63.2
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 2.6e-48 195.7 147 66.0
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 4.4e-48 194.9 150 62.7
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 4.4e-48 194.9 150 65.3
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 7.5e-48 194.1 150 63.3
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 7.5e-48 194.1 148 64.2
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 9.8e-48 193.7 151 63.6
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.7e-47 193.0 135 70.4
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 1.7e-47 193.0 135 70.4
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 1.4e-46 189.9 150 63.3
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 1.9e-46 189.5 134 70.9
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 3.2e-46 188.7 140 66.4
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 4.1e-46 188.3 135 68.9
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 1.6e-45 186.4 150 62.0
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 4.6e-45 184.9 150 61.3
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 1.0e-44 183.7 139 66.2
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 3.0e-44 182.2 150 58.7
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 3.9e-44 181.8 150 59.3
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 1.1e-43 180.3 129 69.8
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 1.5e-43 179.9 150 62.7
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 1.2e-42 176.8 136 68.4
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 1.6e-42 176.4 150 62.7
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 6.2e-42 174.5 117 71.8
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.8e-41 172.9 117 69.2
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 3.2e-38 162.2 105 77.1
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 5.4e-38 161.4 126 62.7
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 6.6e-36 154.5 151 58.3
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 2.8e-34 149.1 151 52.3
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 1.2e-32 143.7 105 67.6
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 6.4e-31 137.9 138 51.4
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 5.4e-30 134.8 100 68.0
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 9.2e-30 134.0 149 52.3
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 1.6e-29 133.3 150 50.7
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 3.8e-23 112.1 173 39.3
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 6.4e-23 111.3 130 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 1.1e-19 100.5 89 51.7
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 8.4e-15 84.3 71 63.4
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 1.9e-14 83.2 79 57.0
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 4.3e-11 72.0 96 35.4
PRCOL_00007052 Prasinoderma coloniale HOM05D004660 ORTHO05D005474 1.4e-06 57.0 66 40.9


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