Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 2.8e-105 385.2 182 100.0
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 2.2e-102 375.6 182 97.8
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 6.5e-102 374.0 182 97.3
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 6.5e-102 374.0 182 97.3
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 1.1e-101 373.2 182 96.2
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-90 336.7 183 88.0
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 9.4e-85 317.0 171 88.3
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 4.7e-84 314.7 172 86.0
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 7.5e-82 307.4 182 80.8
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 2.7e-76 288.9 168 80.4
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 3.6e-76 288.5 170 81.8
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 8.0e-76 287.3 169 81.1
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 2.3e-75 285.8 163 81.6
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.2e-74 283.5 161 83.9
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 2.6e-74 282.3 164 79.9
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 1.3e-73 280.0 180 73.9
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 5.4e-72 274.6 160 83.8
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 1.3e-70 270.0 166 74.7
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 1.7e-70 269.6 163 78.5
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 2.7e-63 245.7 159 67.9
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 8.0e-52 207.6 158 59.5
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.0e-30 137.5 166 45.8
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 1.3e-30 137.1 167 45.5
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 2.3e-30 136.3 163 45.4
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 1.1e-29 134.0 168 44.6
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 1.1e-29 134.0 168 44.6
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 1.5e-29 133.7 169 43.8
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 3.3e-29 132.5 168 44.0
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 7.3e-29 131.3 167 43.7
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 9.6e-29 131.0 163 44.8
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 9.6e-29 131.0 163 44.8
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 9.6e-29 131.0 163 44.8
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-28 130.6 167 43.7
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 2.1e-28 129.8 163 44.8
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 2.8e-28 129.4 163 44.2
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 3.1e-27 125.9 171 41.5
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 5.2e-27 125.2 168 39.9
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.7e-25 120.2 167 43.1
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 1.1e-24 117.5 135 45.9
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.9e-24 116.7 167 40.7
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 3.4e-10 69.3 188 29.3
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 4.5e-10 68.9 187 31.0
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 5.8e-10 68.6 153 32.0
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 1.3e-09 67.4 163 31.3
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.7e-09 67.0 162 29.0
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 1.7e-09 67.0 162 29.0
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 2.9e-09 66.2 163 30.7
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 3.8e-09 65.9 185 28.1
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 3.8e-09 65.9 152 31.6
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 6.4e-09 65.1 164 29.3
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 3.2e-08 62.8 127 33.1
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 4.2e-08 62.4 134 32.1
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 7.1e-08 61.6 127 33.1
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 1.6e-07 60.5 162 31.5
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 6.0e-07 58.5 142 30.3
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 1.3e-06 57.4 151 28.5
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 5.1e-06 55.5 96 33.3
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 8.7e-06 54.7 87 36.8


User provided reference genes

Program Settings