Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 1.1e-92 343.2 159 100.0
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 3.2e-81 305.1 144 98.6
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 5.5e-73 277.7 144 86.8
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 7.2e-73 277.3 144 84.7
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-72 276.6 144 85.4
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 1.2e-72 276.6 144 86.8
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 1.2e-72 276.6 144 85.4
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.7e-69 266.2 144 81.2
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.1e-68 261.9 147 80.3
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.7e-66 256.1 144 77.1
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 5.5e-65 251.1 146 76.0
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 9.4e-65 250.4 144 79.9
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 1.2e-64 250.0 146 78.1
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 3.6e-64 248.4 144 77.8
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 3.6e-64 248.4 144 77.8
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 3.6e-64 248.4 144 77.8
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 6.1e-64 247.7 151 72.2
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 4.0e-63 245.0 144 76.4
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 5.2e-63 244.6 144 76.4
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 2.8e-56 222.2 140 78.6
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 8.9e-55 217.2 146 68.5
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 4.6e-51 204.9 101 96.0
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 9.5e-49 197.2 102 94.1
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.3e-45 186.8 152 55.3
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 1.0e-34 150.6 135 54.8
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 2.9e-29 132.5 156 42.9
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 2.9e-29 132.5 156 42.9
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 1.2e-27 127.1 156 41.0
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 1.6e-27 126.7 156 41.0
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 4.6e-27 125.2 157 41.4
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 6.6e-26 121.3 135 45.9
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 1.1e-25 120.6 147 38.8
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.5e-25 120.2 79 68.4
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.8e-23 113.2 129 48.1
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 2.4e-23 112.8 147 40.1
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 3.4e-22 109.0 151 39.7
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 4.4e-22 108.6 145 39.3
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 1.3e-21 107.1 148 38.5
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 2.2e-21 106.3 148 39.2
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 2.9e-21 105.9 148 37.8
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 2.9e-21 105.9 148 38.5
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 4.9e-21 105.1 148 37.8
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 4.9e-21 105.1 148 35.8
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 1.1e-20 104.0 148 38.5
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.9e-20 103.2 148 36.5
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 3.2e-20 102.4 148 37.2
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 9.0e-15 84.3 151 33.1
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 1.2e-14 84.0 151 33.1
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 1.2e-14 84.0 151 33.1
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 1.2e-14 84.0 151 33.1
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 3.4e-14 82.4 151 33.8
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 7.6e-14 81.3 151 31.8
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 9.9e-14 80.9 123 34.1
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 1.7e-13 80.1 107 39.3
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 2.9e-13 79.3 122 33.6
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 4.9e-13 78.6 107 37.4
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 1.9e-12 76.6 151 31.8
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 2.4e-12 76.3 123 31.7
MELO3C035761.2 Cucumis melo HOM05D000256 ORTHO05D000119 7.6e-06 54.7 98 35.7


User provided reference genes

Program Settings