Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p39010 Brassica napus HOM05D010839 ORTHO05D012555 9.3e-86 320.1 152 100.0
BraA02t08871Z Brassica rapa HOM05D010839 ORTHO05D012555 2.1e-85 318.9 152 99.3
BcaC03g17831 Brassica carinata HOM05D010839 ORTHO05D012555 4.8e-82 307.8 152 96.1
C02p58600 Brassica napus HOM05D010839 ORTHO05D012555 4.8e-82 307.8 152 96.1
BolC2t11921H Brassica oleracea HOM05D010839 ORTHO05D012555 4.8e-82 307.8 152 96.1
BcaNung06219 Brassica carinata HOM05D010839 ORTHO05D012555 1.4e-62 243.0 152 77.0
Thhalv10005695m.g Eutrema salsugineum HOM05D010839 ORTHO05D012555 4.7e-45 184.9 156 59.6
Sp2g21190 Schrenkiella parvula HOM05D010839 ORTHO05D012555 2.0e-43 179.5 151 58.3
Carub.0006s2446 Capsella rubella HOM05D010839 ORTHO05D012555 1.3e-39 166.8 155 55.5
AL6G38680 Arabidopsis lyrata HOM05D010839 ORTHO05D012555 3.6e-37 158.7 155 52.3
AT5G26805 Arabidopsis thaliana HOM05D010839 ORTHO05D012555 3.0e-36 155.6 155 52.9
CARHR107860 Cardamine hirsuta HOM05D010839 ORTHO05D012555 9.7e-35 150.6 158 51.3
CARHR186730 Cardamine hirsuta HOM05D010839 ORTHO05D012555 2.2e-31 139.4 156 46.8
CARHR186740 Cardamine hirsuta HOM05D010839 ORTHO05D012555 5.5e-30 134.8 157 46.5
Aa31LG11G9830 Aethionema arabicum HOM05D010839 ORTHO05D012555 1.5e-22 110.2 158 42.4
THA.LOC104821741 Tarenaya hassleriana HOM05D010839 ORTHO05D012555 7.5e-19 97.8 160 37.5
Aa31sc443G10 Aethionema arabicum HOM05D010839 ORTHO05D012555 1.3e-18 97.1 158 38.0
Aa31LG11G9840 Aethionema arabicum HOM05D010839 ORTHO05D012555 1.9e-14 83.2 137 37.2
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 1.4e-12 77.0 161 32.3
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 8.9e-12 74.3 159 33.3
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 7.5e-11 71.2 113 33.6
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 2.2e-10 69.7 113 33.6
Aqoxy4G02501 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 5.4e-09 65.1 160 33.1
CARHR058520 Cardamine hirsuta HOM05D010839 ORTHO05D012555 5.4e-09 65.1 56 57.1
Rhsim07G0090600 Rhododendron simsii HOM05D001713 ORTHO05D001669 9.2e-09 64.3 114 34.2
Eucgr.E01944 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.6e-08 63.5 116 37.1
TAR374G0415 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.6e-08 63.5 114 33.3
TAR374G1627 Trochodendron aralioides HOM05D001713 ORTHO05D001669 2.7e-08 62.8 159 30.8
Prupe.5G102400 Prunus persica HOM05D001713 ORTHO05D001669 4.6e-08 62.0 133 30.1
Eucgr.E02029 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.9e-08 61.6 114 33.3
Eucgr.E02044 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.0e-07 60.8 141 29.8
Rhsim13G0098200 Rhododendron simsii HOM05D001713 ORTHO05D001669 1.3e-07 60.5 146 29.5
AT2G33720 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 1.7e-07 60.1 116 34.5
Eucgr.E02057 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.7e-07 60.1 114 34.2
Rhsim07G0090700 Rhododendron simsii HOM05D001713 ORTHO05D001669 1.7e-07 60.1 112 33.9
TAR374G0219 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.7e-07 60.1 119 33.6
Eucgr.E02050 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.0e-07 59.3 114 32.5
Eucgr.L03694 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.0e-07 59.3 114 32.5
TAR374G1468 Trochodendron aralioides HOM05D001713 ORTHO05D001669 3.0e-07 59.3 119 33.6
Eucgr.E02048 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.9e-07 58.9 114 33.3
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 3.9e-07 58.9 139 27.3
Eucgr.E04365 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.0e-07 58.5 114 32.5
BcaB04g21444 Brassica carinata HOM05D001713 ORTHO05D001669 6.6e-07 58.2 121 32.2
Eucgr.L02104 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.6e-07 58.2 114 31.6
Rhsim07G0090800 Rhododendron simsii HOM05D001713 ORTHO05D001669 6.6e-07 58.2 112 33.9
Sabra03G0021400 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0141500 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0141700 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0141900 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0142100 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0142300 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0142500 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0142700 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
Sabra03G0142800 Salix brachista HOM05D001713 ORTHO05D001669 6.6e-07 58.2 63 44.4
BraA01t04478Z Brassica rapa HOM05D001713 ORTHO05D001669 8.6e-07 57.8 120 30.8
Eucgr.E01941 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.6e-07 57.8 138 29.7
Eucgr.E02045 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.6e-07 57.8 114 31.6
Eucgr.E02047 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.6e-07 57.8 114 32.5
Eucgr.L01802 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.6e-07 57.8 114 30.7
Nn4g26403 Nelumbo nucifera HOM05D001713 ORTHO05D001669 8.6e-07 57.8 132 29.5
Aqoxy5G03281 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.1e-06 57.4 152 30.3
Aqoxy5G03283 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.1e-06 57.4 158 29.7
Eucgr.E02060 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.1e-06 57.4 114 31.6
Medtr6g004120 Medicago truncatula HOM05D001713 ORTHO05D001669 1.1e-06 57.4 115 33.9
Ciclev10006908m.g Citrus clementina HOM05D001713 ORTHO05D001669 1.5e-06 57.0 114 30.7
Ciclev10006716m.g Citrus clementina HOM05D001713 ORTHO05D001669 1.9e-06 56.6 114 30.7
Ciclev10006773m.g Citrus clementina HOM05D001713 ORTHO05D001669 1.9e-06 56.6 114 29.8
Eucgr.E02046 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.9e-06 56.6 114 31.6
Sabra04G0080300 Salix brachista HOM05D001713 ORTHO05D001669 2.5e-06 56.2 119 28.6
Sabra04G0080400 Salix brachista HOM05D001713 ORTHO05D001669 2.5e-06 56.2 119 28.6
Eucgr.E02053 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.3e-06 55.8 114 31.6
Sabra18G0027300 Salix brachista HOM05D001713 ORTHO05D001669 3.3e-06 55.8 63 42.9
CiPaw.04G131800 Carya illinoinensis HOM05D001713 ORTHO05D001669 4.3e-06 55.5 145 30.3
Eucgr.E02039 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.3e-06 55.5 114 31.6
Carub.0004s1535 Capsella rubella HOM05D001713 ORTHO05D001669 5.6e-06 55.1 116 31.0
Cfa012228 Carpinus fangiana HOM05D001713 ORTHO05D001669 5.6e-06 55.1 116 33.6
Eucgr.E02051 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.6e-06 55.1 114 29.8
Gohir.D09G186450 Gossypium hirsutum HOM05D001713 ORTHO05D001669 5.6e-06 55.1 124 36.3
Gorai.006G209200 Gossypium raimondii HOM05D001713 ORTHO05D001669 5.6e-06 55.1 124 36.3
AL4G33160 Arabidopsis lyrata HOM05D001713 ORTHO05D038556 7.3e-06 54.7 120 33.3
Medtr1g045720 Medicago truncatula HOM05D001713 ORTHO05D001669 7.3e-06 54.7 144 30.6
Potri.003G191901 Populus trichocarpa HOM05D001713 ORTHO05D001669 7.3e-06 54.7 119 31.1
TAR374G0438 Trochodendron aralioides HOM05D001713 ORTHO05D001669 7.3e-06 54.7 115 31.3
Aqoxy5G03280 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 9.5e-06 54.3 64 40.6
AL4G29400 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 9.5e-06 54.3 149 29.5
Cfa012186 Carpinus fangiana HOM05D001713 ORTHO05D001669 9.5e-06 54.3 124 30.6
CiPaw.04G131900 Carya illinoinensis HOM05D001713 ORTHO05D001669 9.5e-06 54.3 131 31.3
Eucgr.E04371 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.5e-06 54.3 114 29.8
Eucgr.E04373 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.5e-06 54.3 114 29.8
TPR.G34966 Trifolium pratense HOM05D001713 ORTHO05D001669 9.5e-06 54.3 116 35.3


User provided reference genes

Program Settings