Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p37330 Brassica napus HOM05D001603 ORTHO05D001393 4.9e-54 214.2 103 100.0
BraA02t08719Z Brassica rapa HOM05D001603 ORTHO05D001393 4.9e-54 214.2 103 100.0
BcaC03g17640 Brassica carinata HOM05D001603 ORTHO05D001393 1.6e-41 172.6 88 95.5
C02p56390 Brassica napus HOM05D001603 ORTHO05D001393 2.3e-40 168.7 101 78.2
BolC2t11697H Brassica oleracea HOM05D001603 ORTHO05D001393 2.3e-40 168.7 101 78.2
BcaB07g30009 Brassica carinata HOM05D001603 ORTHO05D001393 1.2e-39 166.4 103 75.7
BcaC03g17639 Brassica carinata HOM05D001603 ORTHO05D001393 1.2e-39 166.4 103 76.7
A02p37320 Brassica napus HOM05D001603 ORTHO05D001393 5.8e-39 164.1 103 75.7
BraA02t08718Z Brassica rapa HOM05D001603 ORTHO05D001393 5.8e-39 164.1 103 75.7
A02p37310 Brassica napus HOM05D001603 ORTHO05D001393 1.3e-38 162.9 103 76.7
BraA02t08717Z Brassica rapa HOM05D001603 ORTHO05D001393 1.7e-38 162.5 101 77.2
BcaC03g17638 Brassica carinata HOM05D001603 ORTHO05D001393 4.9e-38 161.0 101 77.2
BcaB07g30008 Brassica carinata HOM05D001603 ORTHO05D001393 4.6e-36 154.5 103 71.8
BcaB07g30007 Brassica carinata HOM05D001603 ORTHO05D001393 4.7e-33 144.4 98 70.4
C02p56360 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-32 141.7 98 68.4
BolC2t11693H Brassica oleracea HOM05D001603 ORTHO05D001393 3.1e-32 141.7 98 68.4
BcaC03g17637 Brassica carinata HOM05D001603 ORTHO05D001393 5.8e-31 137.5 98 66.3
BraA02t08716Z Brassica rapa HOM05D001603 ORTHO05D001393 6.4e-30 134.0 98 65.3
BcaC06g30819 Brassica carinata HOM05D001603 ORTHO05D001393 1.4e-29 132.9 99 60.6
A02p37300 Brassica napus HOM05D001603 ORTHO05D001393 5.4e-29 131.0 98 64.3
Thhalv10005180m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.3e-27 126.3 101 60.4
Carub.0008s0778 Capsella rubella HOM05D001603 ORTHO05D001393 1.0e-19 100.1 109 48.6
AT5G48210 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.3e-19 99.8 99 51.5
CARHR184130 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.3e-18 95.1 101 50.5
AL8G20900 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 4.2e-13 78.2 68 58.8
RcHm_v2.0_Chr2g0087131 Rosa chinensis HOM05D001603 ORTHO05D001393 1.3e-09 66.6 87 40.2
AT5G42895 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.4e-08 63.2 78 43.6
CARHR042770 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.4e-08 63.2 80 43.8
CARHR181490 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.4e-08 62.4 106 35.8
BcaC07g37175 Brassica carinata HOM05D001603 ORTHO05D001393 5.3e-08 61.2 81 44.4
BcaC07g37231 Brassica carinata HOM05D001603 ORTHO05D001393 6.9e-08 60.8 77 45.5
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 6.9e-08 60.8 94 35.1
BcaC07g37177 Brassica carinata HOM05D001603 ORTHO05D001393 9.0e-08 60.5 77 45.5
BcaC07g37178 Brassica carinata HOM05D001603 ORTHO05D001393 9.0e-08 60.5 78 44.9
BcaC07g37179 Brassica carinata HOM05D001603 ORTHO05D001393 9.0e-08 60.5 77 45.5
A08p05250 Brassica napus HOM05D001603 ORTHO05D001393 9.0e-08 60.5 77 45.5
A08p06930 Brassica napus HOM05D001603 ORTHO05D001393 9.0e-08 60.5 77 46.8
AT5G36661 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.2e-07 60.1 77 45.5
AT5G36738 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.2e-07 60.1 77 45.5
C08p05610 Brassica napus HOM05D001603 ORTHO05D001393 1.2e-07 60.1 77 45.5
A08p06920 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-07 59.7 81 44.4
C08p05570 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-07 59.7 77 44.2
CSS0032619 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 1.5e-07 59.7 71 36.6
THA.LOC104801737 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.5e-07 59.7 68 39.7
A08p06940 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-07 59.3 112 36.6
C08p05590 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-07 59.3 77 45.5
Thhalv10005158m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 2.0e-07 59.3 108 37.0
Sp2g17840 Schrenkiella parvula HOM05D001603 ORTHO05D001393 2.0e-07 59.3 107 31.8
AT4G09545 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-07 58.9 78 42.3
AT5G36480 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-07 58.9 77 44.2
CARHR187420 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.6e-07 58.9 99 39.4
Thhalv10005657m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 2.6e-07 58.9 95 32.6
AT5G36350 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36360 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36370 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36380 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36390 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36400 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36410 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36420 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36430 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36440 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36450 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36460 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36470 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36520 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
AT5G36540 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 77 44.2
THA.LOC104809119 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.4e-07 58.5 68 38.2
AT3G42565 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.5e-07 58.2 77 42.9
AT5G36490 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.5e-07 58.2 77 44.2
AT5G36550 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.5e-07 58.2 77 44.2
A08p05260 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-07 58.2 77 44.2
A08p05300 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-07 58.2 76 44.7
A08p05310 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-07 58.2 78 43.6
A08p06960 Brassica napus HOM05D001603 ORTHO05D001393 4.5e-07 58.2 80 46.2
Sp1g35035 Schrenkiella parvula HOM05D001603 ORTHO05D001393 4.5e-07 58.2 119 31.9
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 4.5e-07 58.2 83 34.9
AT5G36500 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.8e-07 57.8 77 44.2
A06p40030 Brassica napus HOM05D001603 ORTHO05D001393 5.8e-07 57.8 107 32.7
A08p06950 Brassica napus HOM05D001603 ORTHO05D001393 5.8e-07 57.8 77 45.5
BraA06t26918Z Brassica rapa HOM05D001603 ORTHO05D001393 5.8e-07 57.8 107 32.7
AT5G36658 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 9.9e-07 57.0 77 42.9
Lj7C438T17 Lonicera japonica HOM05D001603 ORTHO05D001393 9.9e-07 57.0 95 33.7
A08p05320 Brassica napus HOM05D001603 ORTHO05D001393 1.3e-06 56.6 69 46.4
BolC7t44336H Brassica oleracea HOM05D001603 ORTHO05D001393 1.3e-06 56.6 107 32.7
AL5G28100 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.7e-06 56.2 87 34.5
BcaC07g37174 Brassica carinata HOM05D001603 ORTHO05D001393 1.7e-06 56.2 78 41.0
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 1.7e-06 56.2 76 36.8
CARHR274670 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.7e-06 56.2 83 39.8
BcaB07g30090 Brassica carinata HOM05D001603 ORTHO05D001393 2.2e-06 55.8 95 33.7
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 2.2e-06 55.8 64 39.1
RcHm_v2.0_Chr2g0087141 Rosa chinensis HOM05D001603 ORTHO05D001393 2.2e-06 55.8 113 30.1
AT5G36657 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.9e-06 55.5 100 38.0
A08p05270 Brassica napus HOM05D001603 ORTHO05D001393 2.9e-06 55.5 70 44.3
BcaC06g33682 Brassica carinata HOM05D001603 ORTHO05D001393 3.8e-06 55.1 107 31.8
A08p05280 Brassica napus HOM05D001603 ORTHO05D001393 3.8e-06 55.1 69 46.4
A08p05290 Brassica napus HOM05D001603 ORTHO05D001393 3.8e-06 55.1 69 46.4
C07p38140 Brassica napus HOM05D001603 ORTHO05D001393 3.8e-06 55.1 107 31.8
BcaC01g06102 Brassica carinata HOM05D001603 ORTHO05D001393 4.9e-06 54.7 66 36.4
BcaC01g06105 Brassica carinata HOM05D001603 ORTHO05D001393 4.9e-06 54.7 66 36.4
AT5G36310 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.4e-06 54.3 77 41.6
AT5G36340 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.4e-06 54.3 77 41.6
BcaC07g37176 Brassica carinata HOM05D001603 ORTHO05D001393 6.4e-06 54.3 68 44.1
BolC2t11698H Brassica oleracea HOM05D001603 ORTHO05D105513 6.4e-06 54.3 28 96.4
Duzib187G1233 Durio zibethinus HOM05D001603 ORTHO05D001393 6.4e-06 54.3 109 34.9


User provided reference genes

Program Settings