Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p37300 Brassica napus HOM05D001603 ORTHO05D001393 8.9e-53 209.9 100 100.0
BraA02t08716Z Brassica rapa HOM05D001603 ORTHO05D001393 4.4e-52 207.6 100 99.0
BcaC03g17637 Brassica carinata HOM05D001603 ORTHO05D001393 2.4e-50 201.8 100 96.0
C02p56360 Brassica napus HOM05D001603 ORTHO05D001393 1.2e-49 199.5 100 96.0
BolC2t11693H Brassica oleracea HOM05D001603 ORTHO05D001393 1.2e-49 199.5 100 96.0
BcaB07g30007 Brassica carinata HOM05D001603 ORTHO05D001393 8.1e-46 186.8 100 88.0
C02p56390 Brassica napus HOM05D001603 ORTHO05D001393 5.8e-36 154.1 97 73.2
BolC2t11697H Brassica oleracea HOM05D001603 ORTHO05D001393 5.8e-36 154.1 97 73.2
BcaC03g17639 Brassica carinata HOM05D001603 ORTHO05D001393 2.2e-35 152.1 101 71.3
A02p37310 Brassica napus HOM05D001603 ORTHO05D001393 2.4e-34 148.7 101 70.3
A02p37320 Brassica napus HOM05D001603 ORTHO05D001393 2.4e-34 148.7 101 70.3
BraA02t08718Z Brassica rapa HOM05D001603 ORTHO05D001393 2.4e-34 148.7 101 70.3
BraA02t08717Z Brassica rapa HOM05D001603 ORTHO05D001393 4.2e-34 147.9 97 71.1
BcaB07g30009 Brassica carinata HOM05D001603 ORTHO05D001393 9.2e-34 146.7 97 73.2
BcaC03g17638 Brassica carinata HOM05D001603 ORTHO05D001393 2.7e-33 145.2 97 71.1
BcaC06g30819 Brassica carinata HOM05D001603 ORTHO05D001393 1.3e-32 142.9 100 66.0
Thhalv10005180m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 3.3e-31 138.3 100 66.0
BcaB07g30008 Brassica carinata HOM05D001603 ORTHO05D001393 8.1e-30 133.7 97 66.0
A02p37330 Brassica napus HOM05D001603 ORTHO05D001393 6.9e-29 130.6 98 64.3
BraA02t08719Z Brassica rapa HOM05D001603 ORTHO05D001393 6.9e-29 130.6 98 64.3
AT5G48210 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.9e-27 124.4 98 60.2
Carub.0008s0778 Capsella rubella HOM05D001603 ORTHO05D001393 1.4e-26 122.9 111 53.2
CARHR184130 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.9e-26 122.5 99 58.6
BcaC03g17640 Brassica carinata HOM05D001603 ORTHO05D001393 6.6e-24 114.0 87 64.4
AL8G20900 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 9.3e-18 93.6 69 63.8
RcHm_v2.0_Chr2g0087131 Rosa chinensis HOM05D001603 ORTHO05D001393 5.8e-12 74.3 85 45.9
Sp1g35035 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.7e-11 72.8 110 39.1
Aa31LG5G23090 Aethionema arabicum HOM05D001603 ORTHO05D001393 4.9e-11 71.2 99 38.4
AT5G42895 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.1e-10 70.1 106 40.6
Carub.0008s1404 Capsella rubella HOM05D001603 ORTHO05D001393 2.5e-10 68.9 79 39.2
RcHm_v2.0_Chr2g0087141 Rosa chinensis HOM05D001603 ORTHO05D001393 2.5e-10 68.9 84 42.9
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 3.2e-10 68.6 99 35.4
AT3G42565 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.2e-10 68.2 105 39.0
BcaC07g37231 Brassica carinata HOM05D001603 ORTHO05D001393 5.5e-10 67.8 106 41.5
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 5.5e-10 67.8 80 41.2
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 5.5e-10 67.8 80 41.2
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 5.5e-10 67.8 79 40.5
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 5.5e-10 67.8 103 37.9
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 7.1e-10 67.4 80 40.0
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 7.1e-10 67.4 80 40.0
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 7.1e-10 67.4 68 47.1
RcHm_v2.0_Chr1g0323971 Rosa chinensis HOM05D001603 ORTHO05D001393 7.1e-10 67.4 104 38.5
AT5G53742 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 9.3e-10 67.0 72 41.7
A08p05250 Brassica napus HOM05D001603 ORTHO05D001393 9.3e-10 67.0 107 41.1
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 1.2e-09 66.6 80 40.0
AT4G09545 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.6e-09 66.2 107 37.4
AT5G36350 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36360 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36380 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36390 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36400 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36410 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36420 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36430 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36440 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36450 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36460 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36470 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36480 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G36520 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 105 39.0
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.1e-09 65.9 75 40.0
BcaC01g06072 Brassica carinata HOM05D001603 ORTHO05D001393 2.1e-09 65.9 75 42.7
A08p06960 Brassica napus HOM05D001603 ORTHO05D001393 2.1e-09 65.9 77 48.1
BolC3t14309H Brassica oleracea HOM05D001603 ORTHO05D001393 2.1e-09 65.9 75 42.7
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 2.1e-09 65.9 76 40.8
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 2.7e-09 65.5 73 35.6
AT5G36490 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.7e-09 65.5 105 39.0
BcaC07g37177 Brassica carinata HOM05D001603 ORTHO05D001393 2.7e-09 65.5 77 49.4
BcaC07g37179 Brassica carinata HOM05D001603 ORTHO05D001393 2.7e-09 65.5 77 49.4
C03p19220 Brassica napus HOM05D001603 ORTHO05D001393 2.7e-09 65.5 75 42.7
C08p05590 Brassica napus HOM05D001603 ORTHO05D001393 2.7e-09 65.5 77 49.4
C08p05610 Brassica napus HOM05D001603 ORTHO05D001393 2.7e-09 65.5 77 49.4
AT5G36370 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.5e-09 65.1 105 39.0
AT5G36540 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.5e-09 65.1 105 39.0
A08p05300 Brassica napus HOM05D001603 ORTHO05D001393 3.5e-09 65.1 79 49.4
AT5G36550 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.6e-09 64.7 105 39.0
A08p05260 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-09 64.7 107 40.2
Thhalv10005657m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 4.6e-09 64.7 94 38.3
Gohir.D13G021050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 4.6e-09 64.7 102 40.2
Lj7A438G59 Lonicera japonica HOM05D001603 ORTHO05D001393 4.6e-09 64.7 98 35.7
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 4.6e-09 64.7 99 37.4
TWI63G0036 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 4.6e-09 64.7 65 43.1
AT5G36500 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.0e-09 64.3 105 39.0
BcaB07g30090 Brassica carinata HOM05D001603 ORTHO05D001393 6.0e-09 64.3 93 34.4
Carub.0008s1435 Capsella rubella HOM05D001603 ORTHO05D001393 6.0e-09 64.3 90 41.1
CARHR181490 Cardamine hirsuta HOM05D001603 ORTHO05D001393 6.0e-09 64.3 105 36.2
AT5G36658 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.9e-09 63.9 111 36.0
BcaC07g37174 Brassica carinata HOM05D001603 ORTHO05D001393 7.9e-09 63.9 79 48.1
BcaC07g37175 Brassica carinata HOM05D001603 ORTHO05D001393 7.9e-09 63.9 77 48.1
Gorai.N025500 Gossypium raimondii HOM05D001603 ORTHO05D001393 7.9e-09 63.9 102 40.2
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 7.9e-09 63.9 78 39.7
A08p06930 Brassica napus HOM05D001603 ORTHO05D001393 1.0e-08 63.5 77 46.8
C08p05570 Brassica napus HOM05D001603 ORTHO05D001393 1.0e-08 63.5 77 46.8
CSS0032619 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 1.0e-08 63.5 70 40.0
COL.COLO4_33371 Corchorus olitorius HOM05D001603 ORTHO05D001393 1.0e-08 63.5 72 38.9
THA.LOC104807824 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.0e-08 63.5 99 38.4
A06p40030 Brassica napus HOM05D001603 ORTHO05D001393 1.3e-08 63.2 104 33.7
BraA06t26918Z Brassica rapa HOM05D001603 ORTHO05D001393 1.3e-08 63.2 104 33.7
Gohir.A13G020450 Gossypium hirsutum HOM05D001603 ORTHO05D001393 1.3e-08 63.2 102 39.2
AT5G36661 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-08 62.8 105 38.1
AT5G36738 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-08 62.8 105 38.1
A03p16340 Brassica napus HOM05D001603 ORTHO05D001393 1.8e-08 62.8 75 41.3
BraA03t10924Z Brassica rapa HOM05D001603 ORTHO05D001393 1.8e-08 62.8 75 41.3
A08p05320 Brassica napus HOM05D001603 ORTHO05D001393 2.3e-08 62.4 68 51.5
A08p06940 Brassica napus HOM05D001603 ORTHO05D001393 2.3e-08 62.4 108 38.9
BolC7t44336H Brassica oleracea HOM05D001603 ORTHO05D001393 2.3e-08 62.4 104 33.7
CARHR154350 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.3e-08 62.4 110 35.5
A08p06920 Brassica napus HOM05D001603 ORTHO05D001393 3.0e-08 62.0 68 50.0
Thhalv10005158m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 3.0e-08 62.0 102 36.3
Peaxi162Scf01694g00006 Petunia axillaris HOM05D001603 ORTHO05D001393 3.0e-08 62.0 88 31.8
Sp6g09890 Schrenkiella parvula HOM05D001603 ORTHO05D001393 3.0e-08 62.0 101 35.6
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 3.9e-08 61.6 96 36.5
AT5G36310 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.9e-08 61.6 105 37.1
AT5G36340 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.9e-08 61.6 105 37.1
A08p05270 Brassica napus HOM05D001603 ORTHO05D001393 3.9e-08 61.6 99 39.4
A08p05310 Brassica napus HOM05D001603 ORTHO05D001393 3.9e-08 61.6 77 46.8
FvH4_1g02090 Fragaria vesca HOM05D001603 ORTHO05D001393 3.9e-08 61.6 80 37.5
FAN19G2115 Fragaria x ananassa HOM05D001603 ORTHO05D001393 3.9e-08 61.6 80 37.5
A03p16350 Brassica napus HOM05D001603 ORTHO05D001393 5.1e-08 61.2 74 41.9
A08p06950 Brassica napus HOM05D001603 ORTHO05D001393 5.1e-08 61.2 107 38.3
C03p19230 Brassica napus HOM05D001603 ORTHO05D001393 5.1e-08 61.2 74 41.9
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.1e-08 61.2 82 39.0
BcaC01g06071 Brassica carinata HOM05D001603 ORTHO05D001393 6.7e-08 60.8 74 41.9
BcaC06g33682 Brassica carinata HOM05D001603 ORTHO05D001393 6.7e-08 60.8 104 32.7
A08p05280 Brassica napus HOM05D001603 ORTHO05D001393 6.7e-08 60.8 80 41.2
C07p38140 Brassica napus HOM05D001603 ORTHO05D001393 6.7e-08 60.8 104 32.7
A08p05290 Brassica napus HOM05D001603 ORTHO05D001393 8.7e-08 60.5 68 50.0
C08p05580 Brassica napus HOM05D001603 ORTHO05D001393 8.7e-08 60.5 77 46.8
AT5G36330 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.1e-07 60.1 105 36.2
THA.LOC104809119 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.1e-07 60.1 67 41.8
BcaC07g37176 Brassica carinata HOM05D001603 ORTHO05D001393 1.5e-07 59.7 77 46.8
C02p62770 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-07 59.7 72 36.1
BolC2t12348H Brassica oleracea HOM05D001603 ORTHO05D001393 1.5e-07 59.7 72 36.1
AT5G36657 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.9e-07 59.3 76 40.8
BcaC07g37178 Brassica carinata HOM05D001603 ORTHO05D001393 1.9e-07 59.3 77 46.8
Sp2g17840 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.9e-07 59.3 94 35.1
Sc18g0000140 Simmondsia chinensis HOM05D001603 ORTHO05D001393 1.9e-07 59.3 90 36.7
THA.LOC104801737 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.9e-07 59.3 67 41.8
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 2.5e-07 58.9 102 32.4
C08p05560 Brassica napus HOM05D001603 ORTHO05D001393 2.5e-07 58.9 77 46.8
BcaB07g29691 Brassica carinata HOM05D001603 ORTHO05D001393 3.3e-07 58.5 72 36.1
CARHR277370 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.3e-07 58.5 72 37.5
Lj7C438T17 Lonicera japonica HOM05D001603 ORTHO05D001393 3.3e-07 58.5 94 37.2
AT5G36662 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.3e-07 58.2 105 36.2
AT5G36739 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.3e-07 58.2 105 36.2
BcaC03g18210 Brassica carinata HOM05D001603 ORTHO05D001393 4.3e-07 58.2 72 34.7
A02p42780 Brassica napus HOM05D001603 ORTHO05D001393 4.3e-07 58.2 72 34.7
BraA02t09204Z Brassica rapa HOM05D001603 ORTHO05D001393 4.3e-07 58.2 72 34.7
Carub.0007s0514 Capsella rubella HOM05D001603 ORTHO05D001393 4.3e-07 58.2 66 37.9
CARHR016560 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.3e-07 58.2 106 37.7
Thecc.09G136800 Theobroma cacao HOM05D001603 ORTHO05D001393 4.3e-07 58.2 106 36.8
Thecc.09G137000 Theobroma cacao HOM05D001603 ORTHO05D001393 4.3e-07 58.2 79 35.4
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.7e-07 57.8 66 39.4
AL8G25360 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.7e-07 57.8 69 37.7
BcaC01g06264 Brassica carinata HOM05D001603 ORTHO05D001393 5.7e-07 57.8 78 35.9
Carub.0008s2422 Capsella rubella HOM05D001603 ORTHO05D001393 5.7e-07 57.8 72 33.3
CARHR267040 Cardamine hirsuta HOM05D001603 ORTHO05D001393 5.7e-07 57.8 80 33.8
THA.LOC104811298 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.7e-07 57.8 88 38.6
TWI34G1530 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 5.7e-07 57.8 65 40.0
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 7.4e-07 57.4 107 33.6
CARHR274670 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.6e-07 57.0 104 36.5
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 1.3e-06 56.6 100 34.0
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 1.3e-06 56.6 83 37.3
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 1.6e-06 56.2 100 34.0
BcaC01g06102 Brassica carinata HOM05D001603 ORTHO05D001393 1.6e-06 56.2 65 40.0
BcaC01g06105 Brassica carinata HOM05D001603 ORTHO05D001393 1.6e-06 56.2 65 40.0
COL.COLO4_33373 Corchorus olitorius HOM05D001603 ORTHO05D001393 2.1e-06 55.8 96 39.6
Gorai.013G023700 Gossypium raimondii HOM05D001603 ORTHO05D001393 2.1e-06 55.8 81 35.8
AT5G51105 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.8e-06 55.5 109 31.2
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 4.8e-06 54.7 70 37.1
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 4.8e-06 54.7 64 35.9
AT4G35165 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.8e-06 54.7 66 36.4
COL.COLO4_33374 Corchorus olitorius HOM05D001603 ORTHO05D001393 4.8e-06 54.7 96 39.6
CAN.G184.54 Capsicum annuum HOM05D001603 ORTHO05D001393 6.2e-06 54.3 86 32.6
CARHR187420 Cardamine hirsuta HOM05D001603 ORTHO05D001393 6.2e-06 54.3 76 38.2
TWI34G1802 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 6.2e-06 54.3 76 38.2
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 8.2e-06 53.9 108 31.5
RcHm_v2.0_Chr2g0149601 Rosa chinensis HOM05D001603 ORTHO05D001393 8.2e-06 53.9 69 39.1


User provided reference genes

Program Settings