Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 2.2e-61 239.2 159 100.0
C02p30800 Brassica napus HOM05D009238 ORTHO05D012489 3.2e-52 208.8 152 74.3
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 3.6e-48 195.3 226 54.0
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 5.6e-41 171.4 146 88.4
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 8.1e-40 167.5 85 96.5
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 2.7e-19 99.4 90 62.2
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-19 99.0 84 61.9
A04p06620 Brassica napus HOM05D009238 ORTHO05D012489 1.5e-17 93.6 85 60.0
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-15 87.4 77 58.4
BraA04t16367Z Brassica rapa HOM05D009238 ORTHO05D012489 2.4e-15 86.3 85 57.6
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 5.3e-15 85.1 81 55.6
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 1.5e-14 83.6 84 54.8
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 3.4e-14 82.4 66 62.1
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.3e-13 80.5 83 54.2
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 1.3e-13 80.5 82 52.4
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 4.9e-13 78.6 84 53.6
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.9e-12 76.6 75 53.3
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 1.9e-12 76.6 66 56.1
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 5.4e-12 75.1 66 54.5
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 7.1e-12 74.7 86 52.3
C03p31480 Brassica napus HOM05D009238 ORTHO05D021611 1.6e-11 73.6 66 54.5
BraA07t28639Z Brassica rapa HOM05D009238 ORTHO05D012489 2.1e-11 73.2 73 52.1
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 3.5e-11 72.4 69 55.1
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 7.9e-11 71.2 48 66.7
BcaB06g25898 Brassica carinata HOM05D011670 ORTHO05D012489 8.7e-10 67.8 72 52.8
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.1e-09 67.4 56 60.7
BcaB05g23728 Brassica carinata HOM05D009238 ORTHO05D012489 1.9e-09 66.6 72 52.8
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-09 66.2 46 65.2
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 2.8e-08 62.8 49 65.3
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 2.8e-08 62.8 49 65.3
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 4.8e-08 62.0 46 67.4
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 4.8e-08 62.0 46 67.4
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 6.2e-08 61.6 46 65.2
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 8.1e-08 61.2 44 61.4
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 8.1e-08 61.2 56 58.9
BraA01t02545Z Brassica rapa HOM05D009238 ORTHO05D021611 8.1e-08 61.2 75 50.7
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 60.5 46 60.9
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 1.4e-07 60.5 87 47.1
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 1.4e-07 60.5 44 61.4
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 1.4e-07 60.5 44 61.4
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.8e-07 60.1 81 42.0
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 3.1e-07 59.3 53 50.9
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-07 59.3 64 45.3
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 3.1e-07 59.3 81 45.7
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 4.0e-07 58.9 46 60.9
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 5.3e-07 58.5 48 58.3
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 6.9e-07 58.2 66 45.5
BcaC02g10496 Brassica carinata HOM05D011670 ORTHO05D012489 9.0e-07 57.8 47 61.7
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 9.0e-07 57.8 79 43.0
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 9.0e-07 57.8 48 54.2
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 9.0e-07 57.8 79 43.0
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 9.0e-07 57.8 79 43.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.2e-06 57.4 44 59.1
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 1.2e-06 57.4 48 54.2
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 57.0 44 54.5
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 1.5e-06 57.0 48 54.2
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 1.5e-06 57.0 48 54.2
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 1.5e-06 57.0 71 40.8
BcaB06g28484 Brassica carinata HOM05D011670 ORTHO05D027357 2.0e-06 56.6 45 57.8
BcaB06g28485 Brassica carinata HOM05D011670 ORTHO05D001112 2.0e-06 56.6 45 57.8
BcaB06g28487 Brassica carinata HOM05D011670 ORTHO05D027357 2.0e-06 56.6 45 57.8
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-06 56.6 46 56.5
BcaC07g36896 Brassica carinata HOM05D004566 ORTHO05D000925 2.0e-06 56.6 44 61.4
BcaC09g50328 Brassica carinata HOM05D000018 ORTHO05D008577 2.0e-06 56.6 50 52.0
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 2.0e-06 56.6 46 58.7
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 2.0e-06 56.6 62 46.8
BcaB03g14365 Brassica carinata HOM05D011670 ORTHO05D027274 2.6e-06 56.2 75 42.7
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 2.6e-06 56.2 46 56.5
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 3.4e-06 55.8 87 42.5
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-06 55.5 44 54.5
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 5.8e-06 55.1 78 43.6
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-06 54.3 44 54.5
BcaC08g47032 Brassica carinata HOM05D009238 ORTHO05D012489 9.9e-06 54.3 91 39.6


User provided reference genes

Program Settings