Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17591 Brassica carinata HOM05D009762 ORTHO05D010379 1.9e-46 189.1 116 100.0
A02p36720 Brassica napus HOM05D009762 ORTHO05D010379 1.9e-46 189.1 116 100.0
BraA02t08666Z Brassica rapa HOM05D000224 ORTHO05D001489 7.9e-45 183.7 113 99.1
BolC2t11635H Brassica oleracea HOM05D000224 ORTHO05D001489 2.3e-44 182.2 112 99.1
C02p55770 Brassica napus HOM05D009762 ORTHO05D010379 1.7e-39 166.0 116 84.5
BolC2t11630H Brassica oleracea HOM05D009762 ORTHO05D010379 1.7e-39 166.0 116 84.5
BcaB07g30073 Brassica carinata HOM05D009762 ORTHO05D010379 1.8e-36 156.0 118 83.9
Sp2g18060 Schrenkiella parvula HOM05D009762 ORTHO05D010379 1.0e-31 140.2 86 79.1
AT3G29780 Arabidopsis thaliana HOM05D009762 ORTHO05D010379 8.0e-29 130.6 91 75.8
BcaC06g30856 Brassica carinata HOM05D009762 ORTHO05D010379 1.3e-26 123.2 88 75.0
BcaC06g33701 Brassica carinata HOM05D009762 ORTHO05D010379 1.7e-26 122.9 87 74.7
C07p38310 Brassica napus HOM05D009762 ORTHO05D010379 1.7e-26 122.9 87 74.7
BolC7t44357H Brassica oleracea HOM05D009762 ORTHO05D010379 1.7e-26 122.9 87 74.7
AL5G20160 Arabidopsis lyrata HOM05D009762 ORTHO05D010379 2.8e-26 122.1 88 72.7
Carub.0005s0834 Capsella rubella HOM05D009762 ORTHO05D010379 1.8e-25 119.4 91 71.4
Aa31LG2G3830 Aethionema arabicum HOM05D009762 ORTHO05D010379 3.8e-23 111.7 117 54.7
BcaC03g17469 Brassica carinata HOM05D009762 ORTHO05D010379 2.5e-22 109.0 91 67.0
C02p54290 Brassica napus HOM05D009762 ORTHO05D010379 9.4e-22 107.1 91 68.1
BolC2t11496H Brassica oleracea HOM05D009762 ORTHO05D010379 3.6e-21 105.1 91 67.0
Thhalv10005153m.g Eutrema salsugineum HOM05D009762 ORTHO05D010379 4.7e-21 104.8 119 52.1
A06p39820 Brassica napus HOM05D009762 ORTHO05D010379 8.0e-21 104.0 88 63.6
THA.LOC104825761 Tarenaya hassleriana HOM05D009762 ORTHO05D010379 9.1e-17 90.5 92 52.2
C02p55780 Brassica napus HOM05D009762 ORTHO05D010379 1.0e-15 87.0 89 55.1
BolC2t11631H Brassica oleracea HOM05D009762 ORTHO05D010379 1.0e-15 87.0 89 55.1
C02p55790 Brassica napus HOM05D009762 ORTHO05D010379 3.2e-14 82.0 83 61.4
BolC2t11632H Brassica oleracea HOM05D009762 ORTHO05D010379 3.2e-14 82.0 83 61.4
C02p54280 Brassica napus HOM05D009762 ORTHO05D010379 5.2e-12 74.7 89 51.7
BolC2t11495H Brassica oleracea HOM05D009762 ORTHO05D010379 3.7e-10 68.6 87 51.7
BcaC03g17468 Brassica carinata HOM05D009762 ORTHO05D010379 9.1e-09 63.9 89 48.3
SabraUnG0001300 Salix brachista HOM05D010262 ORTHO05D010379 1.2e-08 63.5 60 50.0
SabraUnG0001100 Salix brachista HOM05D010262 ORTHO05D010379 2.0e-08 62.8 60 50.0
Sabra17G0084700 Salix brachista HOM05D010262 ORTHO05D010379 3.8e-07 58.5 63 42.9
Potri.017G096500 Populus trichocarpa HOM05D010262 ORTHO05D010379 5.0e-07 58.2 63 44.4
Potri.017G098300 Populus trichocarpa HOM05D010262 ORTHO05D010379 3.3e-06 55.5 54 46.3
Gohir.A07G079500 Gossypium hirsutum HOM05D010262 ORTHO05D010379 9.5e-06 53.9 74 44.6
SabraUnG0001200 Salix brachista HOM05D010262 ORTHO05D010379 9.5e-06 53.9 60 43.3
SabraUnG0001500 Salix brachista HOM05D010262 ORTHO05D010379 9.5e-06 53.9 60 43.3


User provided reference genes

Program Settings