Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 4.3e-98 361.3 178 100.0
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 5.7e-95 350.9 179 96.6
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 6.4e-94 347.4 170 100.0
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 2.0e-92 342.4 173 97.1
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 2.3e-91 339.0 172 97.7
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 1.1e-90 336.7 172 97.1
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 1.0e-88 330.1 170 93.5
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 2.3e-88 328.9 170 94.1
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 4.4e-87 324.7 173 91.9
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 4.4e-87 324.7 173 92.5
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 2.4e-85 318.9 173 90.2
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 1.3e-83 313.2 170 89.4
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 1.7e-83 312.8 163 91.4
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 7.3e-82 307.4 170 87.6
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 4.7e-81 304.7 169 88.2
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 2.1e-73 279.3 144 92.4
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 4.0e-72 275.0 154 81.8
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 5.8e-71 271.2 165 75.8
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 2.9e-70 268.9 175 74.9
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 8.4e-70 267.3 165 76.4
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 3.2e-69 265.4 167 74.9
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 7.1e-69 264.2 171 71.3
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 1.2e-68 263.5 168 72.6
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 1.6e-68 263.1 164 73.2
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 2.1e-68 262.7 165 73.9
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 2.1e-68 262.7 167 76.6
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 2.7e-68 262.3 173 72.3
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 2.7e-68 262.3 168 74.4
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 7.8e-68 260.8 161 75.8
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 1.7e-67 259.6 167 71.9
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 2.3e-67 259.2 171 73.1
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 6.6e-67 257.7 166 71.7
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 6.6e-67 257.7 169 72.2
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.1e-66 256.9 172 71.5
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.9e-66 256.1 166 71.1
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 2.5e-66 255.8 162 72.8
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 2.5e-66 255.8 171 70.8
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 4.3e-66 255.0 160 74.4
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 7.3e-66 254.2 171 71.3
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 7.3e-66 254.2 149 79.2
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 9.6e-66 253.8 166 72.9
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 1.6e-65 253.1 166 72.9
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 2.8e-65 252.3 166 70.5
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 2.8e-65 252.3 169 69.8
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 6.2e-65 251.1 163 73.6
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.2e-65 251.1 163 73.6
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 8.1e-65 250.8 162 73.5
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 8.1e-65 250.8 154 74.7
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 1.4e-64 250.0 154 73.4
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 1.4e-64 250.0 171 70.2
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 1.8e-64 249.6 154 74.0
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.4e-64 249.2 151 76.8
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 2.4e-64 249.2 162 71.0
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 5.2e-64 248.1 163 72.4
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 5.2e-64 248.1 156 72.4
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 5.2e-64 248.1 168 67.9
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 9.0e-64 247.3 158 70.9
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.5e-63 246.5 156 71.8
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 2.0e-63 246.1 155 72.9
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 2.6e-63 245.7 154 71.4
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 2.6e-63 245.7 166 71.1
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 2.6e-63 245.7 164 72.0
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 3.4e-63 245.4 157 72.0
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 3.4e-63 245.4 163 73.0
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 5.8e-63 244.6 162 69.1
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 7.6e-63 244.2 156 70.5
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.7e-62 243.0 163 71.2
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 2.2e-62 242.7 162 70.4
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 2.2e-62 242.7 164 69.5
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 2.9e-62 242.3 164 68.9
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 4.9e-62 241.5 149 75.8
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 6.4e-62 241.1 168 66.7
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 1.4e-61 240.0 156 69.2
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.9e-61 239.6 147 72.8
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 4.2e-61 238.4 152 70.4
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 5.4e-61 238.0 153 73.2
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 1.2e-60 236.9 164 65.9
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.6e-60 236.5 179 66.5
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 1.6e-60 236.5 173 67.6
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 2.1e-60 236.1 132 89.4
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 6.0e-60 234.6 153 73.2
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 7.8e-60 234.2 153 71.9
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 7.8e-60 234.2 162 62.3
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 3.0e-59 232.3 160 68.8
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 6.6e-59 231.1 160 68.8
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 6.6e-59 231.1 157 65.6
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 2.5e-58 229.2 152 66.4
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 2.4e-53 212.6 161 67.1
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 2.1e-52 209.5 183 60.7
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 3.3e-50 202.2 121 73.6
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 1.1e-48 197.2 148 60.1
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 1.8e-48 196.4 121 72.7
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 1.5e-47 193.4 130 66.9
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 1.3e-46 190.3 146 58.9
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 2.2e-46 189.5 165 56.4
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 3.8e-46 188.7 157 61.1
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 6.4e-46 188.0 117 70.1
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 7.1e-45 184.5 98 89.8
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 5.1e-43 178.3 151 60.3
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 1.1e-42 177.2 153 55.6
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 7.1e-37 157.9 119 71.4
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 1.3e-35 153.7 156 52.6
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-34 148.3 92 70.7
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 4.8e-33 145.2 87 74.7
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.8e-32 143.3 99 72.7
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.6e-28 129.0 76 72.4
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 2.5e-21 106.3 73 72.6
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.1e-12 76.6 50 70.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 9.7e-10 67.8 43 72.1
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 1.8e-08 63.5 51 62.7
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 2.4e-08 63.2 71 47.9
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 3.1e-08 62.8 43 67.4
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 7.0e-08 61.6 40 70.0
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.6e-07 60.5 51 51.0
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 1.7e-06 57.0 47 55.3


User provided reference genes

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