Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p36240 Brassica napus HOM05D004994 ORTHO05D006359 1.1e-142 510.0 260 100.0
Sp2g17620 Schrenkiella parvula HOM05D004994 ORTHO05D006359 8.4e-87 324.3 322 57.5
BraA06t26936Z Brassica rapa HOM05D004994 ORTHO05D006359 2.1e-85 319.7 327 57.2
A06p40210 Brassica napus HOM05D004994 ORTHO05D006359 1.0e-84 317.4 326 57.1
Thhalv10004712m.g Eutrema salsugineum HOM05D004994 ORTHO05D006359 5.6e-83 311.6 319 57.1
AT3G28970 Arabidopsis thaliana HOM05D004994 ORTHO05D006359 6.9e-73 278.1 324 51.9
CARHR152070 Cardamine hirsuta HOM05D004994 ORTHO05D006359 3.8e-71 272.3 318 51.3
Carub.0005s0755 Capsella rubella HOM05D004994 ORTHO05D006359 2.5e-70 269.6 323 50.8
C07p37900 Brassica napus HOM05D004994 ORTHO05D006359 1.7e-66 256.9 268 55.2
BolC7t44311H Brassica oleracea HOM05D004994 ORTHO05D006359 3.0e-60 236.1 214 59.8
AL5G18820 Arabidopsis lyrata HOM05D004994 ORTHO05D006359 7.4e-59 231.5 289 49.5
BcaC06g33661 Brassica carinata HOM05D004994 ORTHO05D006359 8.5e-55 218.0 177 64.4
THA.LOC104805471 Tarenaya hassleriana HOM05D004994 ORTHO05D006359 2.1e-53 213.4 318 44.3
Aa31LG2G4200 Aethionema arabicum HOM05D004994 ORTHO05D006359 3.6e-53 212.6 289 49.8
TWI60G0928 Tripterygium wilfordii HOM05D004994 ORTHO05D006359 3.8e-39 166.0 290 36.9
Duzib264G0898 Durio zibethinus HOM05D004994 ORTHO05D006359 3.2e-38 162.9 293 39.6
Ciclev10012215m.g Citrus clementina HOM05D004994 ORTHO05D006359 7.2e-38 161.8 345 35.4
MD09G1052100 Malus domestica HOM05D004994 ORTHO05D006359 6.1e-37 158.7 343 36.4
CiPaw.03G025700 Carya illinoinensis HOM05D004994 ORTHO05D006359 1.4e-36 157.5 348 33.9
Cfa007567 Carpinus fangiana HOM05D004994 ORTHO05D006359 2.6e-35 153.3 348 33.6
COL.COLO4_08441 Corchorus olitorius HOM05D004994 ORTHO05D006359 4.4e-35 152.5 345 34.5
Gorai.007G079100 Gossypium raimondii HOM05D004994 ORTHO05D006359 5.7e-35 152.1 334 34.7
RcHm_v2.0_Chr2g0168311 Rosa chinensis HOM05D004994 ORTHO05D006359 1.7e-34 150.6 344 34.9
Gohir.A11G069700 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.1e-33 147.9 332 33.4
Manes.02G047000 Manihot esculenta HOM05D004994 ORTHO05D006359 1.1e-33 147.9 342 32.2
vmacro18188 Vaccinium macrocarpon HOM05D004994 ORTHO05D006359 3.1e-33 146.4 332 34.6
Dinv33769 Davidia involucrata HOM05D004994 ORTHO05D006359 4.1e-33 146.0 341 32.8
QL02p082399 Quercus lobata HOM05D004994 ORTHO05D006359 5.4e-33 145.6 340 33.5
Lsat_1_v5_gn_3_100161 Lactuca sativa HOM05D004994 ORTHO05D006359 1.2e-32 144.4 315 35.2
Duzib187G1623 Durio zibethinus HOM05D004994 ORTHO05D006359 3.5e-32 142.9 336 31.8
FAN02G2251 Fragaria x ananassa HOM05D004994 ORTHO05D006359 4.5e-32 142.5 344 35.2
Potri.004G122100 Populus trichocarpa HOM05D004994 ORTHO05D006359 5.9e-32 142.1 335 34.0
GSVIVG01011430001 Vitis vinifera HOM05D004994 ORTHO05D006359 7.7e-32 141.7 347 32.9
Actinidia38767 Actinidia chinensis HOM05D004994 ORTHO05D006359 1.3e-31 141.0 337 33.2
Lj1g0010103 Lotus japonicus HOM05D004994 ORTHO05D006359 1.3e-31 141.0 337 33.8
FAN14G4526 Fragaria x ananassa HOM05D004994 ORTHO05D006359 1.7e-31 140.6 333 35.7
Sabra04G0090700 Salix brachista HOM05D004994 ORTHO05D006359 1.7e-31 140.6 340 34.4
CiPaw.04G016600 Carya illinoinensis HOM05D004994 ORTHO05D006359 2.3e-31 140.2 348 33.3
CSS0023109 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 3.8e-31 139.4 344 33.4
CSS0046814 Camellia sinensis var. sinensis HOM05D004994 ORTHO05D006359 3.8e-31 139.4 344 33.4
FAN09G3433 Fragaria x ananassa HOM05D004994 ORTHO05D006359 3.8e-31 139.4 344 34.9
Glyma.09G237300 Glycine max HOM05D004994 ORTHO05D006359 3.8e-31 139.4 334 32.3
FvH4_6g48370 Fragaria vesca HOM05D004994 ORTHO05D006359 5.0e-31 139.0 338 35.2
Thecc.04G083400 Theobroma cacao HOM05D004994 ORTHO05D006359 8.6e-31 138.3 345 33.0
Ca_02909_v3 Cicer arietinum L. HOM05D004994 ORTHO05D006359 1.5e-30 137.5 331 32.3
FAN05G1406 Fragaria x ananassa HOM05D004994 ORTHO05D006359 1.5e-30 137.5 336 34.8
Potri.017G084300 Populus trichocarpa HOM05D004994 ORTHO05D006359 3.3e-30 136.3 256 36.7
Gorai.012G053600 Gossypium raimondii HOM05D004994 ORTHO05D006359 7.2e-30 135.2 340 32.6
Eucgr.J01350 Eucalyptus grandis HOM05D004994 ORTHO05D006359 2.8e-29 133.3 341 32.3
Lalb_Chr04g0258601 Lupinus albus HOM05D004994 ORTHO05D006359 6.1e-29 132.1 339 33.3
arahy.Tifrunner.gnm1.ann1.87XTYU Arachis hypogaea HOM05D004994 ORTHO05D006359 8.0e-29 131.7 334 32.0
ClCG09G018190 Citrullus lanatus HOM05D004994 ORTHO05D006359 8.0e-29 131.7 340 30.6
MSTRG.3242 Avicennia marina HOM05D004994 ORTHO05D006359 8.9e-28 128.3 339 32.2
Atru.chr8.179 Acer truncatum HOM05D004994 ORTHO05D006359 1.2e-27 127.9 368 30.2
Duzib147G1333 Durio zibethinus HOM05D004994 ORTHO05D006359 3.4e-27 126.3 340 33.5
PGR083G2047 Punica granatum HOM05D004994 ORTHO05D006359 3.4e-27 126.3 324 32.7
Actinidia17553 Actinidia chinensis HOM05D004994 ORTHO05D006359 4.4e-27 125.9 339 33.0
MELO3C021990.2 Cucumis melo HOM05D004994 ORTHO05D006359 7.5e-27 125.2 340 30.6
CsaV3_5G038070 Cucumis sativus L. HOM05D004994 ORTHO05D006359 9.8e-27 124.8 338 31.7
SGA_v2.0_scaffold90G27627 Striga asiatica HOM05D004994 ORTHO05D006359 2.2e-26 123.6 331 30.8
Phvul.008G036800 Phaseolus vulgaris HOM05D004994 ORTHO05D006359 3.7e-26 122.9 333 30.0
Hma1.2p1_0409F.1_g146890 Hydrangea macrophylla HOM05D004994 ORTHO05D006359 4.9e-26 122.5 341 29.9
Nn3g17257 Nelumbo nucifera HOM05D004994 ORTHO05D006359 4.9e-26 122.5 350 31.1
VMungo1383G3357 Vigna mungo HOM05D004994 ORTHO05D006359 4.9e-26 122.5 334 30.2
FAN14G4158 Fragaria x ananassa HOM05D004994 ORTHO05D006359 6.3e-26 122.1 297 35.4
Glyma.18G260200 Glycine max HOM05D004994 ORTHO05D006359 6.3e-26 122.1 330 30.6
Dinv11519 Davidia involucrata HOM05D004994 ORTHO05D006359 1.8e-25 120.6 235 35.7
BraA02t08623Z Brassica rapa HOM05D000425 ORTHO05D000373 3.1e-25 119.8 120 63.3
EL10Ac2g02983 Beta vulgaris HOM05D004994 ORTHO05D006359 7.0e-25 118.6 291 31.6
HanXRQChr09g0265211 Helianthus annuus HOM05D004994 ORTHO05D006359 7.0e-25 118.6 320 32.5
Medtr7g010920 Medicago truncatula HOM05D004994 ORTHO05D006359 7.0e-25 118.6 313 30.4
Rhsim08G0070200 Rhododendron simsii HOM05D004994 ORTHO05D006359 1.2e-24 117.9 306 32.4
Cc07_g03440 Coffea canephora HOM05D004994 ORTHO05D006359 3.5e-24 116.3 346 30.9
Lju41A14T30 Lonicera japonica HOM05D004994 ORTHO05D006359 4.5e-24 115.9 290 31.7
ECA246G4730 Erigeron canadensis HOM05D004994 ORTHO05D006359 5.9e-24 115.5 339 31.3
SalBow1G0614 Salvia bowleyana HOM05D004994 ORTHO05D006359 1.3e-23 114.4 311 30.5
CANSAT64G0414 Cannabis sativa HOM05D004994 ORTHO05D006359 2.3e-23 113.6 341 29.0
TAR374G0051 Trochodendron aralioides HOM05D004994 ORTHO05D006359 2.3e-23 113.6 348 30.2
HanXRQChr13g0399841 Helianthus annuus HOM05D004994 ORTHO05D006359 8.6e-23 111.7 329 31.0
SalBow1G7872 Salvia bowleyana HOM05D004994 ORTHO05D006359 8.6e-23 111.7 311 30.2
Sed0013315 Sechium edule HOM05D004994 ORTHO05D006359 1.5e-22 110.9 336 28.9
PSO478G2065 Papaver somniferum HOM05D004994 ORTHO05D006359 3.3e-22 109.8 342 29.8
Migut.H00929 Erythranthe guttata HOM05D004994 ORTHO05D006359 5.6e-22 109.0 270 31.5
Haze_14520 Corylus avellana HOM05D000513 ORTHO05D005338 7.3e-22 108.6 196 36.2
Sc10g0003560 Simmondsia chinensis HOM05D004994 ORTHO05D006359 9.5e-22 108.2 333 27.0
PGSC0003DMG400001423 Solanum tuberosum HOM05D004994 ORTHO05D006359 1.6e-21 107.5 336 28.3
Hund13212 Selenicereus undatus HOM05D004994 ORTHO05D006359 2.1e-21 107.1 349 29.5
Oeu027852.1 Olea europaea HOM05D004994 ORTHO05D006359 8.0e-21 105.1 310 30.6
Solyc02g088010.3 Solanum lycopersicum HOM05D004994 ORTHO05D006359 8.0e-21 105.1 336 28.3
Oeu027854.1 Olea europaea HOM05D004994 ORTHO05D006359 4.0e-20 102.8 309 30.4
Gohir.A05G367000 Gossypium hirsutum HOM05D004994 ORTHO05D006359 6.8e-20 102.1 203 35.5
Prupe.3G266600 Prunus persica HOM05D004994 ORTHO05D006359 1.2e-19 101.3 242 32.2
DCAR_011091 Daucus carota HOM05D004994 ORTHO05D006359 2.6e-19 100.1 304 28.9
Gohir.D04G048100 Gossypium hirsutum HOM05D004994 ORTHO05D006359 4.4e-19 99.4 203 35.0
TAR629G2463 Trochodendron aralioides HOM05D004994 ORTHO05D006359 9.8e-19 98.2 282 32.3
CAN.G206.156 Capsicum annuum HOM05D004994 ORTHO05D006359 1.3e-18 97.8 338 28.7
Lj4A110G78 Lonicera japonica HOM05D004994 ORTHO05D006359 1.3e-18 97.8 192 35.9
Cpa.g.sc1691.1 Carica papaya HOM05D004994 ORTHO05D006359 2.9e-18 96.7 161 39.8
Actinidia38785 Actinidia chinensis HOM05D004994 ORTHO05D006359 3.7e-18 96.3 198 34.3
Nitab4.5_0000564g0010 Nicotiana tabacum HOM05D004994 ORTHO05D006359 3.7e-18 96.3 360 27.5
PSO017G6367 Papaver somniferum HOM05D004994 ORTHO05D006359 3.7e-18 96.3 378 27.5
Ah.10g031580 Amaranthus hybridus HOM05D004994 ORTHO05D006359 8.3e-18 95.1 283 29.3
Aqoxy3G03411 Aquilegia oxysepala HOM05D004994 ORTHO05D006359 1.8e-17 94.0 340 30.3
unitig_21.g20929 Utricularia gibba HOM05D004994 ORTHO05D006359 2.4e-17 93.6 313 28.1
Psat0s1002g0160 Pisum sativum HOM05D004994 ORTHO05D006359 3.2e-17 93.2 205 33.7
ECA232G4685 Erigeron canadensis HOM05D004994 ORTHO05D006359 9.2e-17 91.7 331 28.7
Nitab4.5_0002980g0100 Nicotiana tabacum HOM05D004994 ORTHO05D006359 6.0e-16 89.0 374 26.7
MBI02_g15397_MAGBIO Magnolia biondii HOM05D004994 ORTHO05D006359 1.3e-15 87.8 204 30.9
PSO013G0402 Papaver somniferum HOM05D004994 ORTHO05D006359 2.3e-15 87.0 342 27.8
PSO832G1119 Papaver somniferum HOM05D004994 ORTHO05D006359 2.3e-15 87.0 331 26.0
TPR.G33585 Trifolium pratense HOM05D004994 ORTHO05D006359 7.3e-14 82.0 203 30.5
AUR62039809 Chenopodium quinoa HOM05D004994 ORTHO05D006359 2.8e-13 80.1 154 34.4
Peaxi162Scf00129g00125 Petunia axillaris HOM05D004994 ORTHO05D006359 4.0e-12 76.3 134 35.1
CDE07G1068 Ceratophyllum demersum HOM05D004994 ORTHO05D006359 3.7e-10 69.7 137 35.8
MBI12_g43017_MAGBIO Magnolia biondii HOM05D004994 ORTHO05D006359 4.9e-10 69.3 148 32.4
Gohir.A05G366750 Gossypium hirsutum HOM05D004994 ORTHO05D006359 1.1e-09 68.2 147 33.3
AUR62034404 Chenopodium quinoa HOM05D004994 ORTHO05D006359 3.2e-09 66.6 141 31.2
CDE04G1098 Ceratophyllum demersum HOM05D004994 ORTHO05D006359 5.4e-09 65.9 266 26.7
C02p55210 Brassica napus HOM05D000425 ORTHO05D000373 1.2e-08 64.7 102 41.2
BcaC03g17541 Brassica carinata HOM05D000425 ORTHO05D000373 3.5e-08 63.2 102 40.2
Zm00001eb328330 Zea mays HOM05D004994 ORTHO05D006359 4.6e-08 62.8 189 29.1
A06p14700 Brassica napus HOM05D004994 ORTHO05D006359 6.0e-08 62.4 70 51.4
Pp3c16_19930 Physcomitrium patens HOM05D004994 ORTHO05D006359 3.0e-07 60.1 156 32.7
Os07g0631000 Oryza sativa ssp. japonica HOM05D004994 ORTHO05D006359 9.5e-06 55.1 135 29.6


User provided reference genes

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