Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 5.0e-172 609.0 766 100.0
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 1.4e-142 511.1 769 74.1
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 8.7e-132 475.3 780 86.9
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 4.8e-130 469.5 780 84.2
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 1.3e-114 418.3 781 70.7
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 2.2e-95 354.4 759 78.5
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 1.2e-72 278.9 730 53.0
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 1.5e-70 271.9 731 50.2
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 3.0e-68 264.2 730 46.7
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 2.5e-62 244.6 730 47.4
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 2.5e-62 244.6 730 47.4
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 9.5e-62 242.7 190 66.8
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 9.2e-57 226.1 251 59.0
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 7.8e-56 223.0 237 58.2
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 5.8e-51 206.8 760 47.2
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.3e-50 205.7 725 45.0
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 4.3e-46 190.7 195 53.8
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 3.7e-42 177.6 213 51.6
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 2.3e-39 168.3 227 47.1
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 2.5e-38 164.9 211 50.7
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 7.3e-38 163.3 199 50.3
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 7.3e-38 163.3 239 46.4
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 2.8e-37 161.4 727 54.2
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 1.4e-36 159.1 226 46.5
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.1e-33 149.4 212 44.3
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 3.0e-31 141.4 189 46.0
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 3.0e-31 141.4 189 46.0
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 1.1e-30 139.4 189 46.6
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 1.1e-30 139.4 189 46.6
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 1.1e-30 139.4 189 46.6
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 4.8e-29 134.0 189 41.8
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 9.0e-28 129.8 179 40.8
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 9.9e-27 126.3 209 39.7
AL5G18530 Arabidopsis lyrata HOM05D008352 ORTHO05D011250 2.9e-26 124.8 143 52.4
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 8.4e-26 123.2 132 59.1
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 1.1e-25 122.9 227 39.6
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.4e-25 121.7 209 39.7
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 4.6e-24 117.5 203 39.4
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 7.9e-24 116.7 199 42.2
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 7.9e-24 116.7 186 40.9
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 5.1e-23 114.0 146 53.4
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 6.6e-23 113.6 209 37.8
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 2.5e-22 111.7 190 37.9
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 2.5e-22 111.7 190 37.9
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 5.6e-22 110.5 199 38.7
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 5.6e-22 110.5 190 37.9
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 5.6e-22 110.5 190 37.9
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 3.6e-21 107.8 190 37.9
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 4.8e-21 107.5 190 37.4
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 4.8e-21 107.5 190 37.4
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 2.4e-20 105.1 198 34.3
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 3.1e-20 104.8 198 34.3
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 4.0e-20 104.4 182 36.8
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 4.0e-20 104.4 199 36.2
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 4.0e-20 104.4 182 37.9
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 4.0e-20 104.4 192 38.5
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 5.3e-20 104.0 225 37.3
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 5.3e-20 104.0 199 35.7
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 5.3e-20 104.0 225 37.3
Sp2g17870 Schrenkiella parvula HOM05D008352 ORTHO05D011361 9.0e-20 103.2 151 43.0
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 1.5e-19 102.4 219 34.2
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 1.5e-19 102.4 219 34.2
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 4.5e-19 100.9 187 34.8
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 4.5e-19 100.9 184 35.9
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 5.8e-19 100.5 169 37.9
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 1.3e-18 99.4 151 43.0
Sp1g26250 Schrenkiella parvula HOM05D008352 ORTHO05D011361 2.2e-18 98.6 149 41.6
Carub.0005s0735 Capsella rubella HOM05D008352 ORTHO05D011361 4.9e-18 97.4 152 43.4
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 6.4e-18 97.1 210 35.7
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 6.4e-18 97.1 228 34.6
AL5G18540 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 8.4e-18 96.7 151 41.7
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 1.1e-17 96.3 225 34.7
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.9e-17 95.5 167 35.3
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.9e-17 95.5 185 34.1
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.9e-17 95.5 185 34.1
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.9e-17 95.5 226 35.0
CARHR152080 Cardamine hirsuta HOM05D008352 ORTHO05D011361 1.9e-17 95.5 152 40.8
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 3.2e-17 94.7 221 36.2
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 3.2e-17 94.7 169 38.5
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 3.2e-17 94.7 169 38.5
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 5.4e-17 94.0 194 34.5
AL5G18840 Arabidopsis lyrata HOM05D008352 ORTHO05D011361 1.2e-16 92.8 147 42.9
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.6e-16 92.4 200 35.0
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 2.1e-16 92.0 183 36.6
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 2.7e-16 91.7 193 36.3
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 3.5e-16 91.3 197 36.0
A06p40010 Brassica napus HOM05D008352 ORTHO05D011361 3.5e-16 91.3 146 40.4
BraA06t26916Z Brassica rapa HOM05D008352 ORTHO05D011361 3.5e-16 91.3 146 40.4
Carub.0005s0757 Capsella rubella HOM05D008352 ORTHO05D011361 3.5e-16 91.3 150 42.7
Aa31LG2G4400 Aethionema arabicum HOM05D008352 ORTHO05D011361 4.6e-16 90.9 150 40.0
C07p38160 Brassica napus HOM05D008352 ORTHO05D011361 4.6e-16 90.9 149 39.6
AT3G28980 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 6.0e-16 90.5 149 40.9
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 6.0e-16 90.5 183 36.1
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 6.0e-16 90.5 183 36.1
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 6.0e-16 90.5 236 32.6
AT3G28810 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 7.9e-16 90.1 151 40.4
BolC7t44338H Brassica oleracea HOM05D008352 ORTHO05D011361 1.0e-15 89.7 146 40.4
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.0e-15 89.7 200 35.5
AT3G28820 Arabidopsis thaliana HOM05D008352 ORTHO05D011361 2.3e-15 88.6 151 39.7
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 2.3e-15 88.6 213 34.7
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 5.1e-15 87.4 205 35.1
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 1.1e-14 86.3 169 34.3
BraA09t39127Z Brassica rapa HOM05D008352 ORTHO05D011361 1.5e-14 85.9 152 38.2
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 1.5e-14 85.9 205 34.1
A09p36020 Brassica napus HOM05D008352 ORTHO05D011361 3.3e-14 84.7 152 37.5
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 5.6e-14 84.0 172 34.3
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 5.6e-14 84.0 183 31.1
BcaB07g32652 Brassica carinata HOM05D008352 ORTHO05D011361 7.4e-14 83.6 152 35.5
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 9.6e-14 83.2 173 35.3
BcaC01g00190 Brassica carinata HOM05D008352 ORTHO05D011361 2.8e-13 81.6 147 36.1
BcaB07g32675 Brassica carinata HOM05D008352 ORTHO05D011361 3.7e-13 81.3 152 37.5
C05p29370 Brassica napus HOM05D008352 ORTHO05D011361 3.7e-13 81.3 152 37.5
BolC5t31669H Brassica oleracea HOM05D008352 ORTHO05D011361 3.7e-13 81.3 152 37.5
A08p24470 Brassica napus HOM05D008352 ORTHO05D011361 6.2e-13 80.5 152 36.8
BraA08t34403Z Brassica rapa HOM05D008352 ORTHO05D011361 6.2e-13 80.5 152 36.8
C03p76750 Brassica napus HOM05D008352 ORTHO05D011361 4.0e-12 77.8 163 35.0
AT3G28770 Arabidopsis thaliana HOM05D011893 ORTHO05D013967 4.5e-11 74.3 147 34.7
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 7.6e-11 73.6 146 36.3
BcaC03g17528 Brassica carinata HOM05D011893 ORTHO05D013967 2.2e-10 72.0 146 36.3
BolC2t11550H Brassica oleracea HOM05D011893 ORTHO05D013967 2.2e-10 72.0 146 36.3
AL5G18500 Arabidopsis lyrata HOM05D011893 ORTHO05D013967 2.9e-10 71.6 141 36.2
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 4.9e-10 70.9 149 36.9
C02p54900 Brassica napus HOM05D011893 ORTHO05D013967 6.5e-10 70.5 146 35.6
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 1.1e-09 69.7 198 30.3
THA.LOC104808023 Tarenaya hassleriana HOM05D011893 ORTHO05D013967 2.5e-09 68.6 155 31.0
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 5.5e-09 67.4 114 41.2
BcaB07g30118 Brassica carinata HOM05D011893 ORTHO05D013967 7.1e-09 67.0 146 33.6
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-08 65.9 187 31.6
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 1.6e-08 65.9 187 31.6
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.5e-08 64.7 153 33.3
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.5e-08 64.7 153 33.3
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.5e-08 64.7 153 33.3
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 6.0e-08 63.9 187 31.0
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 6.0e-08 63.9 187 31.0
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 6.0e-08 63.9 187 31.0
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 1.0e-07 63.2 116 34.5
A02p36060 Brassica napus HOM05D011893 ORTHO05D013967 1.0e-07 63.2 146 33.6
BraA02t08605Z Brassica rapa HOM05D011893 ORTHO05D013967 1.0e-07 63.2 146 33.6
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 2.3e-07 62.0 180 29.4
SpUn0298_0010 Schrenkiella parvula HOM05D011893 ORTHO05D013967 1.5e-06 59.3 131 32.8
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 9.6e-06 56.6 187 31.0


User provided reference genes

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