Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 8.1e-17 89.4 46 100.0
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 8.1e-17 89.4 46 100.0
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 4.0e-16 87.0 46 97.8
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 4.0e-16 87.0 46 97.8
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.5e-15 85.1 45 95.6
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 2.6e-15 84.3 46 93.5
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 4.4e-15 83.6 46 93.5
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 7.5e-15 82.8 45 93.3
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 9.9e-15 82.4 45 91.1
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 8.3e-14 79.3 46 87.0
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 8.3e-14 79.3 45 86.7
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 1.1e-13 79.0 46 87.0
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.1e-13 79.0 46 87.0
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 1.1e-13 79.0 46 87.0
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.1e-13 79.0 46 87.0
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.2e-13 77.4 46 84.8
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 3.5e-12 73.9 44 84.1
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.7e-11 71.6 46 78.3
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 1.7e-11 71.6 46 78.3
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 2.3e-11 71.2 44 77.3
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 3.0e-11 70.9 44 79.5
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 3.0e-11 70.9 44 77.3
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 5.1e-11 70.1 46 78.3
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 6.6e-11 69.7 44 77.3
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 6.6e-11 69.7 44 79.5
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 6.6e-11 69.7 46 76.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 8.6e-11 69.3 44 75.0
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 8.6e-11 69.3 44 77.3
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 8.6e-11 69.3 43 76.7
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 8.6e-11 69.3 44 79.5
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 8.6e-11 69.3 44 79.5
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 8.6e-11 69.3 44 75.0
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.1e-10 68.9 46 76.1
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 1.1e-10 68.9 44 75.0
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 1.5e-10 68.6 44 77.3
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.5e-10 68.6 46 76.1
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 1.5e-10 68.6 44 79.5
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.5e-10 68.6 44 77.3
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.5e-10 68.6 44 75.0
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.9e-10 68.2 44 72.7
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 1.9e-10 68.2 44 75.0
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 1.9e-10 68.2 44 79.5
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.9e-10 68.2 44 77.3
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.9e-10 68.2 44 77.3
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 1.9e-10 68.2 46 71.7
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 2.5e-10 67.8 44 79.5
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.5e-10 67.8 44 72.7
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.5e-10 67.8 44 75.0
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.5e-10 67.8 44 75.0
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 4.3e-10 67.0 44 68.2
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 4.3e-10 67.0 44 72.7
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.3e-10 67.0 44 77.3
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 75.0
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 72.7
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 77.3
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 72.7
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 72.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 5.6e-10 66.6 44 75.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 7.3e-10 66.2 44 77.3
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 7.3e-10 66.2 44 72.7
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 7.3e-10 66.2 44 75.0
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 7.3e-10 66.2 44 77.3
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 7.3e-10 66.2 44 75.0
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 9.5e-10 65.9 44 75.0
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 9.5e-10 65.9 44 75.0
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 1.2e-09 65.5 44 75.0
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.2e-09 65.5 44 70.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 1.2e-09 65.5 44 72.7
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.6e-09 65.1 44 68.2
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.6e-09 65.1 44 68.2
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.6e-09 65.1 44 68.2
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.6e-09 65.1 44 75.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 1.6e-09 65.1 43 74.4
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.1e-09 64.7 44 70.5
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 2.1e-09 64.7 43 76.7
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 2.1e-09 64.7 43 72.1
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 2.1e-09 64.7 44 72.7
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 2.1e-09 64.7 44 75.0
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 2.1e-09 64.7 44 75.0
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 2.1e-09 64.7 44 75.0
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.8e-09 64.3 44 72.7
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 2.8e-09 64.3 44 70.5
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 2.8e-09 64.3 44 70.5
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.8e-09 64.3 44 70.5
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 2.8e-09 64.3 43 74.4
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 65.9
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 70.5
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 72.7
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 75.0
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 75.0
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 75.0
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 70.5
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 3.6e-09 63.9 44 75.0
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 8.1e-09 62.8 44 65.9
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 8.1e-09 62.8 44 68.2
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 8.1e-09 62.8 43 74.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 1.1e-08 62.4 43 72.1
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.1e-08 62.4 44 68.2
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 1.4e-08 62.0 45 71.1
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 1.4e-08 62.0 43 67.4
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 2.4e-08 61.2 43 65.1
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 4.0e-08 60.5 38 73.7
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 4.0e-08 60.5 39 76.9
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 2.6e-07 57.8 39 71.8


User provided reference genes

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