Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p34050 Brassica napus HOM05D004467 ORTHO05D004918 2.2e-55 218.8 116 100.0
A01p20730 Brassica napus HOM05D004467 ORTHO05D004918 9.7e-51 203.4 117 94.9
A03p60110 Brassica napus HOM05D004467 ORTHO05D004918 9.7e-51 203.4 117 94.9
A04p00920 Brassica napus HOM05D004467 ORTHO05D004918 9.7e-51 203.4 117 94.9
A09p39280 Brassica napus HOM05D004467 ORTHO05D004918 9.7e-51 203.4 117 94.9
A09p54700 Brassica napus HOM05D004467 ORTHO05D004918 9.7e-51 203.4 117 94.9
C07p30780 Brassica napus HOM05D004467 ORTHO05D004918 8.2e-50 200.3 117 93.2
BcaNung02901 Brassica carinata HOM05D004467 ORTHO05D004918 3.6e-37 158.3 122 75.4
C07p56500 Brassica napus HOM05D004467 ORTHO05D004918 3.6e-37 158.3 122 75.4
A03p58480 Brassica napus HOM05D004467 ORTHO05D004918 6.1e-37 157.5 119 75.6
BraA03t14909Z Brassica rapa HOM05D004467 ORTHO05D004918 6.1e-37 157.5 119 75.6
BolC7t46129H Brassica oleracea HOM05D004467 ORTHO05D004918 4.8e-34 147.9 123 71.5
Sp7g26880 Schrenkiella parvula HOM05D004467 ORTHO05D004918 1.2e-32 143.3 140 60.0
Carub.0007s1175 Capsella rubella HOM05D004467 ORTHO05D004918 7.7e-32 140.6 140 59.3
AT4G28910 Arabidopsis thaliana HOM05D004467 ORTHO05D004918 1.0e-31 140.2 140 60.0
Thhalv10025262m.g Eutrema salsugineum HOM05D004467 ORTHO05D004918 2.2e-31 139.0 117 65.0
AL7G23580 Arabidopsis lyrata HOM05D004467 ORTHO05D004918 1.5e-30 136.3 140 57.9
A01p09030 Brassica napus HOM05D004467 ORTHO05D004918 1.9e-30 136.0 117 66.7
BraA01t00851Z Brassica rapa HOM05D004467 ORTHO05D004918 1.9e-30 136.0 117 66.7
CARHR236680 Cardamine hirsuta HOM05D004467 ORTHO05D004918 5.5e-30 134.4 116 65.5
BcaC09g51670 Brassica carinata HOM05D004467 ORTHO05D004918 7.2e-30 134.0 115 65.2
BcaNung06399 Brassica carinata HOM05D004467 ORTHO05D004918 7.2e-30 134.0 115 65.2
C01p10580 Brassica napus HOM05D004467 ORTHO05D004918 7.2e-30 134.0 115 65.2
BolC1t01020H Brassica oleracea HOM05D004467 ORTHO05D004918 7.2e-30 134.0 115 65.2
BcaNung01350 Brassica carinata HOM05D004467 ORTHO05D004918 8.0e-29 130.6 118 61.9
Aa31LG2G21270 Aethionema arabicum HOM05D004467 ORTHO05D004918 1.1e-22 110.2 114 55.3
A01p21180 Brassica napus HOM05D004467 ORTHO05D004918 2.5e-22 109.0 66 81.8
A05p18840 Brassica napus HOM05D004467 ORTHO05D004918 4.2e-22 108.2 61 93.4
THA.LOC104820046 Tarenaya hassleriana HOM05D004467 ORTHO05D004918 1.2e-21 106.7 111 55.9
THA.LOC104814564 Tarenaya hassleriana HOM05D004467 ORTHO05D004918 2.8e-18 95.5 113 55.8
Thecc.09G104300 Theobroma cacao HOM05D004467 ORTHO05D004918 3.2e-14 82.0 123 44.7
Aa31LG8G16970 Aethionema arabicum HOM05D004467 ORTHO05D004918 1.4e-12 76.6 106 45.3
Prupe.7G224200 Prunus persica HOM05D004467 ORTHO05D004918 2.3e-12 75.9 120 44.2
Atru.chr7.1422 Acer truncatum HOM05D004467 ORTHO05D004918 3.0e-12 75.5 119 42.9
COL.COLO4_34790 Corchorus olitorius HOM05D004467 ORTHO05D004918 4.0e-12 75.1 124 43.5
Hma1.2p1_0945F.1_g240200 Hydrangea macrophylla HOM05D004467 ORTHO05D004918 6.8e-12 74.3 135 38.5
FAN28G1510 Fragaria x ananassa HOM05D004467 ORTHO05D004918 1.5e-11 73.2 92 45.7
Haze_25793 Corylus avellana HOM05D004467 ORTHO05D004918 2.0e-11 72.8 122 42.6
FAN26G1468 Fragaria x ananassa HOM05D004467 ORTHO05D004918 2.0e-11 72.8 109 41.3
FAN26G2528 Fragaria x ananassa HOM05D004467 ORTHO05D004918 2.0e-11 72.8 109 41.3
Cpa.g.sc40.31 Carica papaya HOM05D004467 ORTHO05D004918 2.6e-11 72.4 118 42.4
CiPaw.03G227200 Carya illinoinensis HOM05D004467 ORTHO05D004918 2.6e-11 72.4 122 44.3
Dinv41649 Davidia involucrata HOM05D004467 ORTHO05D004918 2.6e-11 72.4 93 48.4
CANSAT56G0937 Cannabis sativa HOM05D004467 ORTHO05D004918 3.4e-11 72.0 114 43.9
MD15G1193100 Malus domestica HOM05D004467 ORTHO05D004918 3.4e-11 72.0 119 42.9
Ciclev10008049m.g Citrus clementina HOM05D004467 ORTHO05D004918 4.4e-11 71.6 122 43.4
FAN23G1822 Fragaria x ananassa HOM05D004467 ORTHO05D004918 9.8e-11 70.5 92 45.7
PGR102G2224 Punica granatum HOM05D004467 ORTHO05D004918 9.8e-11 70.5 105 44.8
RcHm_v2.0_Chr2g0091401 Rosa chinensis HOM05D004467 ORTHO05D004918 1.3e-10 70.1 92 45.7
Duzib168G1064 Durio zibethinus HOM05D004467 ORTHO05D004918 1.7e-10 69.7 123 41.5
Cfa003215 Carpinus fangiana HOM05D004467 ORTHO05D004918 2.8e-10 68.9 122 41.8
Sed0017359 Sechium edule HOM05D004467 ORTHO05D004918 2.8e-10 68.9 119 39.5
TWI32G0931 Tripterygium wilfordii HOM05D004467 ORTHO05D004918 3.7e-10 68.6 119 40.3
Manes.03G024900 Manihot esculenta HOM05D004467 ORTHO05D004918 4.8e-10 68.2 124 41.9
Duzib187G1021 Durio zibethinus HOM05D004467 ORTHO05D004918 6.3e-10 67.8 115 45.2
QL02p042682 Quercus lobata HOM05D004467 ORTHO05D004918 6.3e-10 67.8 124 39.5
QL02p042959 Quercus lobata HOM05D004467 ORTHO05D004918 6.3e-10 67.8 124 39.5
arahy.Tifrunner.gnm1.ann1.6QT9XW Arachis hypogaea HOM05D004467 ORTHO05D004918 1.1e-09 67.0 117 40.2
Manes.16G111600 Manihot esculenta HOM05D004467 ORTHO05D004918 1.1e-09 67.0 124 43.5
arahy.Tifrunner.gnm1.ann1.4I8WV5 Arachis hypogaea HOM05D004467 ORTHO05D004918 3.1e-09 65.5 117 39.3
FvH4_1g05760 Fragaria vesca HOM05D004467 ORTHO05D004918 4.1e-09 65.1 93 44.1
FAN19G0416 Fragaria x ananassa HOM05D004467 ORTHO05D004918 4.1e-09 65.1 93 44.1
Lj7C659T11 Lonicera japonica HOM05D004467 ORTHO05D004918 4.1e-09 65.1 123 39.0
Gohir.A06G065600 Gossypium hirsutum HOM05D004467 ORTHO05D004918 9.1e-09 63.9 92 46.7
Gorai.009G027000 Gossypium raimondii HOM05D004467 ORTHO05D004918 9.1e-09 63.9 123 37.4
Phvul.004G169100 Phaseolus vulgaris HOM05D004467 ORTHO05D004918 1.2e-08 63.5 121 36.4
ClCG11G002290 Citrullus lanatus HOM05D004467 ORTHO05D004918 1.6e-08 63.2 120 37.5
Eucgr.C03788 Eucalyptus grandis HOM05D004467 ORTHO05D004918 1.6e-08 63.2 102 40.2
Gohir.D05G026900 Gossypium hirsutum HOM05D004467 ORTHO05D004918 1.6e-08 63.2 123 37.4
VMungo0464G1817 Vigna mungo HOM05D004467 ORTHO05D004918 1.6e-08 63.2 121 36.4
DCAR_024697 Daucus carota HOM05D004467 ORTHO05D004918 3.5e-08 62.0 114 37.7
MELO3C004575.2 Cucumis melo HOM05D004467 ORTHO05D004918 4.5e-08 61.6 121 38.0
Gorai.010G074900 Gossypium raimondii HOM05D004467 ORTHO05D004918 4.5e-08 61.6 92 45.7
Rhsim05G0042300 Rhododendron simsii HOM05D004467 ORTHO05D004918 5.9e-08 61.2 118 41.5
TWI63G0792 Tripterygium wilfordii HOM05D004467 ORTHO05D004918 5.9e-08 61.2 120 39.2
CsaV3_2G002070 Cucumis sativus L. HOM05D004467 ORTHO05D004918 7.7e-08 60.8 120 36.7
Gohir.A05G025400 Gossypium hirsutum HOM05D004467 ORTHO05D004918 7.7e-08 60.8 120 38.3
Gohir.D06G064200 Gossypium hirsutum HOM05D004467 ORTHO05D004918 7.7e-08 60.8 92 45.7
Lalb_Chr16g0388041 Lupinus albus HOM05D004467 ORTHO05D004918 3.8e-07 58.5 121 36.4
Medtr6g087140 Medicago truncatula HOM05D004467 ORTHO05D004918 5.0e-07 58.2 119 36.1
Ca_25554_v3 Cicer arietinum L. HOM05D004467 ORTHO05D004918 6.6e-07 57.8 89 39.3
TAR626G1578 Trochodendron aralioides HOM05D004467 ORTHO05D004918 8.6e-07 57.4 89 43.8
TAR636G0217 Trochodendron aralioides HOM05D004467 ORTHO05D004918 8.6e-07 57.4 89 43.8
Lalb_Chr05g0223111 Lupinus albus HOM05D004467 ORTHO05D004918 1.1e-06 57.0 111 39.6
Lsat_1_v5_gn_7_41160 Lactuca sativa HOM05D004467 ORTHO05D004918 1.5e-06 56.6 94 43.6
Actinidia20407 Actinidia chinensis HOM05D004467 ORTHO05D004918 3.3e-06 55.5 104 41.3
Glyma.01G146400 Glycine max HOM05D004467 ORTHO05D004918 3.3e-06 55.5 121 34.7
Sed0000460 Sechium edule HOM05D004467 ORTHO05D004918 3.3e-06 55.5 102 38.2
CsaV3_6G021320 Cucumis sativus L. HOM05D004467 ORTHO05D004918 4.2e-06 55.1 82 45.1
Aqoxy7G01500 Aquilegia oxysepala HOM05D004467 ORTHO05D004918 5.5e-06 54.7 127 33.9
EL10Ac8g18417 Beta vulgaris HOM05D004467 ORTHO05D004918 5.5e-06 54.7 78 38.5
ECA240G1275 Erigeron canadensis HOM05D004467 ORTHO05D004918 5.5e-06 54.7 126 37.3
Lj8C70G12 Lonicera japonica HOM05D004467 ORTHO05D004918 5.5e-06 54.7 120 35.0
CSS0050424 Camellia sinensis var. sinensis HOM05D004467 ORTHO05D004918 7.2e-06 54.3 121 38.8
Hund26245 Selenicereus undatus HOM05D004467 ORTHO05D004918 7.2e-06 54.3 91 35.2
CSS0045223 Camellia sinensis var. sinensis HOM05D004467 ORTHO05D004918 9.5e-06 53.9 121 38.8
Potri.018G085100 Populus trichocarpa HOM05D004467 ORTHO05D004918 9.5e-06 53.9 123 41.5
TPR.G28824 Trifolium pratense HOM05D004467 ORTHO05D004918 9.5e-06 53.9 90 41.1


User provided reference genes

Program Settings