Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.6e-228 795.0 403 100.0
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 4.8e-113 412.1 324 69.1
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 4.8e-113 412.1 318 71.4
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 3.1e-112 409.5 318 69.5
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 4.0e-112 409.1 318 70.4
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 1.2e-111 407.5 318 69.8
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 7.6e-111 404.8 318 69.8
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 3.5e-108 396.0 347 64.0
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.0e-107 394.4 347 63.7
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 3.0e-107 392.9 347 64.0
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 8.7e-107 391.3 319 67.7
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 2.8e-105 386.3 343 64.4
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 4.0e-104 382.5 317 65.6
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.4e-101 374.0 344 61.6
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 8.7e-99 364.8 318 63.2
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 2.6e-95 353.2 319 60.5
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 4.6e-92 342.4 318 57.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 2.3e-91 340.1 317 57.4
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.1e-91 339.0 318 58.8
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.1e-91 339.0 318 58.8
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.9e-90 337.0 315 58.4
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 5.7e-90 335.5 325 56.9
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 9.7e-90 334.7 325 55.4
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 9.7e-90 334.7 315 58.4
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 2.8e-89 333.2 315 57.8
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 2.8e-89 333.2 318 57.9
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 4.8e-89 332.4 318 57.2
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.8e-89 332.4 318 57.2
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 8.2e-89 331.6 318 56.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.4e-88 330.9 318 56.0
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.8e-88 330.5 318 57.2
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.8e-88 330.5 313 56.5
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 3.1e-88 329.7 327 55.4
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 3.1e-88 329.7 318 58.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 4.1e-88 329.3 318 56.9
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 5.3e-88 328.9 315 56.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 6.9e-88 328.6 317 56.2
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 6.9e-88 328.6 314 56.4
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 6.9e-88 328.6 318 56.6
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.5e-87 327.4 318 55.7
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.0e-87 327.0 318 56.9
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.0e-87 327.0 316 57.3
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 3.4e-87 326.2 304 57.6
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 4.5e-87 325.9 318 56.9
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 4.5e-87 325.9 319 54.2
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 5.9e-87 325.5 318 57.5
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 2.2e-86 323.6 319 54.9
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 2.2e-86 323.6 318 56.0
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 1.1e-85 321.2 318 55.3
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-85 320.9 311 57.2
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.9e-85 320.5 315 56.2
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.9e-85 320.5 319 54.5
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.5e-85 320.1 315 55.6
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 2.5e-85 320.1 345 54.2
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 3.2e-85 319.7 318 55.3
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 3.2e-85 319.7 319 54.5
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 7.2e-85 318.5 318 54.7
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 9.3e-85 318.2 318 55.3
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 1.2e-84 317.8 315 53.7
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 1.2e-84 317.8 372 51.3
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 2.7e-84 316.6 311 56.6
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 2.7e-84 316.6 318 55.0
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.7e-84 316.6 319 54.2
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 3.6e-84 316.2 332 53.0
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.0e-83 314.7 337 53.4
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 1.8e-83 313.9 336 55.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 3.0e-83 313.2 318 54.1
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 8.7e-83 311.6 321 57.9
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 7.4e-82 308.5 319 53.0
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 7.4e-82 308.5 319 53.6
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 2.8e-81 306.6 318 54.1
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 2.8e-81 306.6 318 53.5
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.1e-80 304.7 315 54.0
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.4e-80 304.3 371 47.7
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 1.8e-80 303.9 320 54.1
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.4e-80 303.5 318 54.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 5.3e-80 302.4 318 54.4
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 9.1e-80 301.6 306 55.9
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.2e-79 301.2 319 54.5
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 3.4e-79 299.7 318 52.8
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 4.5e-79 299.3 242 67.8
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.0e-78 298.1 288 58.0
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 5.0e-78 295.8 286 57.7
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.4e-77 294.3 318 52.2
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 7.2e-77 292.0 318 51.6
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 2.7e-76 290.0 318 50.9
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.0e-75 288.1 368 47.3
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.4e-75 287.7 314 52.9
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 6.7e-75 285.4 323 48.0
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.5e-74 284.3 335 49.3
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.8e-72 277.3 293 52.2
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.2e-71 274.6 314 50.3
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 5.9e-71 272.3 314 50.0
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 5.9e-71 272.3 314 50.0
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 7.7e-71 271.9 292 53.1
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 1.3e-70 271.2 317 49.8
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.3e-70 271.2 361 47.9
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.1e-69 268.1 319 47.6
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.5e-69 266.9 280 54.6
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.7e-68 262.7 272 54.0
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.2e-63 248.1 294 50.3
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 1.0e-62 245.0 276 50.7
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.6e-60 237.7 258 51.6
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.4e-59 234.6 319 42.3
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 4.1e-56 223.0 316 44.6
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.0e-54 218.4 167 69.5
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 5.5e-53 212.6 312 43.3
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.2e-50 204.9 323 40.2
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 7.5e-50 202.2 150 70.7
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 2.7e-47 193.7 227 48.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 3.3e-45 186.8 145 65.5
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 4.2e-45 186.4 121 78.5
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.6e-44 184.5 121 77.7
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 4.1e-40 169.9 109 81.7
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 5.4e-40 169.5 286 39.9
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 2.9e-38 163.7 160 59.4
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 2.5e-37 160.6 224 41.5
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.4e-34 150.2 100 67.0
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.9e-30 136.7 96 72.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 5.2e-27 126.3 335 29.9
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 9.8e-26 122.1 94 58.5
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 9.8e-26 122.1 87 71.3
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 1.1e-24 118.6 166 44.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.3e-22 111.7 274 31.8
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.6e-18 97.4 179 35.2
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 9.9e-18 95.5 51 86.3
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.2e-17 94.4 58 77.6
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 3.3e-13 80.5 119 41.2
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 7.3e-13 79.3 122 41.0
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 4.7e-12 76.6 120 42.5
BolC7t43698H Brassica oleracea HOM05D005638 ORTHO05D105150 1.2e-10 72.0 59 67.8
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 1.3e-09 68.6 81 51.9


User provided reference genes

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