Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30830 Brassica napus HOM05D009342 ORTHO05D012604 1.0e-40 169.5 77 100.0
BraA02t08097Z Brassica rapa HOM05D009342 ORTHO05D012604 1.0e-40 169.5 77 100.0
BraA02t08092Z Brassica rapa HOM05D009342 ORTHO05D012604 1.5e-39 165.6 77 97.4
A02p30770 Brassica napus HOM05D009342 ORTHO05D012604 4.3e-39 164.1 77 96.1
C02p48340 Brassica napus HOM05D009342 ORTHO05D012604 7.4e-39 163.3 77 96.1
BcaC03g16932 Brassica carinata HOM05D009342 ORTHO05D012604 4.3e-31 137.5 62 96.8
C02p48330 Brassica napus HOM05D009342 ORTHO05D012604 7.9e-25 116.7 77 68.8
BolC2t10865H Brassica oleracea HOM05D009342 ORTHO05D012604 7.9e-25 116.7 77 68.8
A02p30760 Brassica napus HOM05D009342 ORTHO05D012604 3.9e-24 114.4 77 68.8
BraA02t08091Z Brassica rapa HOM05D009342 ORTHO05D012604 3.9e-24 114.4 77 68.8
BcaC03g16931 Brassica carinata HOM05D009342 ORTHO05D012604 1.4e-18 95.9 62 67.7
AT5G47077 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 1.8e-16 89.0 74 58.1
AL8G11140 Arabidopsis lyrata HOM05D009342 ORTHO05D012604 1.6e-14 82.4 71 54.9
AT5G47075 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 3.7e-14 81.3 74 52.7
BcaB07g30795 Brassica carinata HOM05D009342 ORTHO05D012604 1.2e-12 76.3 78 51.3
AT5G47175 Arabidopsis thaliana HOM05D009342 ORTHO05D012604 2.0e-12 75.5 79 48.1
Carub.0008s0057 Capsella rubella HOM05D009342 ORTHO05D012604 2.0e-12 75.5 78 47.4
Carub.0008s0074 Capsella rubella HOM05D009342 ORTHO05D012604 1.1e-10 69.7 77 46.8
A09p22830 Brassica napus HOM05D009342 ORTHO05D012604 2.1e-09 65.5 64 48.4
C08p36050 Brassica napus HOM05D009342 ORTHO05D009997 2.1e-09 65.5 77 40.3
BolC8t51185H Brassica oleracea HOM05D009342 ORTHO05D009997 2.1e-09 65.5 77 40.3
BraA09t37885Z Brassica rapa HOM05D009342 ORTHO05D012604 2.1e-09 65.5 64 48.4
BcaC07g40621 Brassica carinata HOM05D009342 ORTHO05D009997 2.7e-09 65.1 77 40.3
C09p29340 Brassica napus HOM05D009342 ORTHO05D012604 2.7e-09 65.1 64 46.9
A09p53240 Brassica napus HOM05D009342 ORTHO05D009997 7.9e-09 63.5 77 40.3
Aa31LG10G15250 Aethionema arabicum HOM05D009342 ORTHO05D009997 1.0e-08 63.2 74 36.5
Sp5g02203 Schrenkiella parvula HOM05D009342 ORTHO05D009997 1.0e-08 63.2 77 37.7
AT3G61172 Arabidopsis thaliana HOM05D009342 ORTHO05D009997 6.7e-08 60.5 74 35.1
CARHR101820 Cardamine hirsuta HOM05D007747 ORTHO05D009997 6.7e-08 60.5 78 39.7
Carub.0005s2783 Capsella rubella HOM05D009342 ORTHO05D009997 2.6e-07 58.5 77 37.7
CARHR096880 Cardamine hirsuta HOM05D007747 ORTHO05D009997 3.3e-07 58.2 78 38.5
CARHR286760 Cardamine hirsuta HOM05D009342 ORTHO05D009997 3.3e-07 58.2 74 35.1
Carub.0230s0002 Capsella rubella HOM05D007747 ORTHO05D009997 2.2e-06 55.5 79 40.5
THA.LOC104815826 Tarenaya hassleriana HOM05D013401 ORTHO05D009997 2.2e-06 55.5 71 33.8
AL5G43420 Arabidopsis lyrata HOM05D007747 ORTHO05D009997 3.7e-06 54.7 79 39.2
CARHR121310 Cardamine hirsuta HOM05D007747 ORTHO05D009997 4.8e-06 54.3 76 38.2
BcaC08g45800 Brassica carinata HOM05D007747 ORTHO05D009997 6.3e-06 53.9 75 37.3
C06p35890 Brassica napus HOM05D007747 ORTHO05D009997 6.3e-06 53.9 75 37.3
BraA07t30726Z Brassica rapa HOM05D007747 ORTHO05D009997 6.3e-06 53.9 75 37.3
A07p30920 Brassica napus HOM05D007747 ORTHO05D009997 8.2e-06 53.5 75 38.7


User provided reference genes

Program Settings