Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30610 Brassica napus HOM05D008727 ORTHO05D023847 4.3e-104 381.3 192 100.0
BraA02t08079Z Brassica rapa HOM05D008727 ORTHO05D023847 1.2e-103 379.8 192 99.5
BolC2t10850H Brassica oleracea HOM05D008727 ORTHO05D023847 1.2e-101 373.2 192 97.9
BcaC03g16915 Brassica carinata HOM05D008727 ORTHO05D023847 2.9e-100 368.6 192 96.9
C02p48180 Brassica napus HOM05D008727 ORTHO05D023847 2.9e-100 368.6 192 96.9
BolC9t60173H Brassica oleracea HOM05D008727 ORTHO05D011379 5.5e-35 151.8 179 49.2
C09p74390 Brassica napus HOM05D008727 ORTHO05D011379 9.4e-35 151.0 179 48.6
BcaC06g31427 Brassica carinata HOM05D008727 ORTHO05D011379 2.3e-33 146.4 176 47.7
A06p45420 Brassica napus HOM05D008727 ORTHO05D011379 5.2e-33 145.2 181 47.0
BraA06t27410Z Brassica rapa HOM05D008727 ORTHO05D011379 5.2e-33 145.2 181 47.0
Sp2g11770 Schrenkiella parvula HOM05D008727 ORTHO05D011379 3.3e-32 142.5 176 49.4
A06p45410 Brassica napus HOM05D008727 ORTHO05D011379 4.4e-32 142.1 176 49.4
BraA06t27409Z Brassica rapa HOM05D008727 ORTHO05D011379 4.4e-32 142.1 176 49.4
C07p30610 Brassica napus HOM05D008727 ORTHO05D011379 5.7e-32 141.7 179 48.6
BolC7t43601H Brassica oleracea HOM05D008727 ORTHO05D011379 5.7e-32 141.7 179 48.6
BcaC06g34300 Brassica carinata HOM05D008727 ORTHO05D011379 7.5e-32 141.4 179 48.6
AT1G54620 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 4.8e-31 138.7 175 47.4
C07p30620 Brassica napus HOM05D008727 ORTHO05D011379 6.3e-31 138.3 177 48.0
BraA10t45379Z Brassica rapa HOM05D008727 ORTHO05D011379 8.2e-31 137.9 184 44.6
BcaC06g34299 Brassica carinata HOM05D008727 ORTHO05D011379 1.1e-30 137.5 177 48.0
BcaC06g31426 Brassica carinata HOM05D008727 ORTHO05D011379 3.1e-30 136.0 177 48.0
BolC7t43602H Brassica oleracea HOM05D008727 ORTHO05D011379 4.1e-30 135.6 177 47.5
AL1G65050 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 5.3e-30 135.2 175 47.4
Carub.0002s0896 Capsella rubella HOM05D008727 ORTHO05D011379 7.0e-30 134.8 175 44.6
Thhalv10001116m.g Eutrema salsugineum HOM05D008727 ORTHO05D011379 7.0e-30 134.8 183 45.4
A10p33490 Brassica napus HOM05D008727 ORTHO05D011379 9.1e-30 134.4 184 44.6
BcaB07g30480 Brassica carinata HOM05D008727 ORTHO05D011379 2.7e-29 132.9 165 50.3
A06p45400 Brassica napus HOM05D008727 ORTHO05D011379 1.0e-28 131.0 177 46.9
BraA06t27408Z Brassica rapa HOM05D008727 ORTHO05D011379 1.0e-28 131.0 177 46.9
BcaC06g31428 Brassica carinata HOM05D008727 ORTHO05D011379 1.3e-28 130.6 161 49.1
AT5G46980 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 5.5e-27 125.2 175 44.6
AT5G46990 Arabidopsis thaliana HOM05D008727 ORTHO05D011379 3.0e-25 119.4 166 42.8
Carub.0008s0088 Capsella rubella HOM05D008727 ORTHO05D011379 3.4e-24 115.9 163 42.3
Thhalv10001202m.g Eutrema salsugineum HOM05D008727 ORTHO05D001261 1.3e-23 114.0 174 40.2
Sp2g11780 Schrenkiella parvula HOM05D008727 ORTHO05D001261 1.7e-23 113.6 188 41.5
Carub.0008s0084 Capsella rubella HOM05D008727 ORTHO05D011379 4.8e-23 112.1 171 40.9
Carub.0008s0086 Capsella rubella HOM05D008727 ORTHO05D011379 3.1e-22 109.4 170 40.0
CARHR055710 Cardamine hirsuta HOM05D008727 ORTHO05D011379 5.4e-22 108.6 175 41.1
BcaNung04448 Brassica carinata HOM05D008727 ORTHO05D011379 7.0e-22 108.2 122 50.0
Sp2g11790 Schrenkiella parvula HOM05D008727 ORTHO05D001261 1.1e-19 100.9 175 39.4
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.3e-17 93.2 182 35.7
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 1.2e-16 90.9 184 33.2
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.7e-15 87.0 182 33.0
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 6.3e-15 85.1 184 32.6
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.1e-14 84.3 157 35.7
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 7.0e-14 81.6 176 32.4
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 7.0e-14 81.6 166 34.3
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.7e-13 79.7 182 32.4
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.7e-12 77.0 182 33.5
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.3e-12 76.6 182 32.4
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 3.8e-12 75.9 181 30.9
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 5.0e-12 75.5 182 31.3
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 6.6e-12 75.1 177 32.2
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-11 74.3 177 33.3
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 1.1e-11 74.3 177 33.3
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 1.9e-11 73.6 180 32.2
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 2.5e-11 73.2 177 32.8
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 5.6e-11 72.0 181 33.1
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 9.5e-11 71.2 182 30.8
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 3.6e-10 69.3 177 30.5
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 3.6e-10 69.3 177 29.9
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 3.6e-10 69.3 177 29.9
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.1e-10 68.6 181 31.5
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 6.1e-10 68.6 177 31.1
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 8.0e-10 68.2 177 31.1
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.0e-09 67.8 180 31.7
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 1.0e-09 67.8 177 31.1
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.0e-09 67.8 183 29.0
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 2.3e-09 66.6 178 31.5
BcaC06g34301 Brassica carinata HOM05D008727 ORTHO05D011379 5.2e-09 65.5 118 39.8
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 5.2e-09 65.5 178 31.5
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 6.8e-09 65.1 167 28.7
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 6.8e-09 65.1 167 28.7
AL8G11300 Arabidopsis lyrata HOM05D008727 ORTHO05D011379 8.9e-09 64.7 54 59.3
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 2.0e-08 63.5 180 29.4
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 2.0e-08 63.5 180 29.4
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 2.0e-08 63.5 180 29.4
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 2.0e-08 63.5 180 29.4
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 2.6e-08 63.2 180 28.3
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 3.4e-08 62.8 180 28.3
A02p30500 Brassica napus HOM05D001445 ORTHO05D001261 4.4e-08 62.4 167 27.5
BraA02t08068Z Brassica rapa HOM05D001445 ORTHO05D001261 4.4e-08 62.4 167 27.5
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 7.5e-08 61.6 180 28.9
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 7.5e-08 61.6 171 26.9
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 7.5e-08 61.6 181 29.8
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 7.5e-08 61.6 171 26.9
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 9.8e-08 61.2 176 27.3
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 2.9e-07 59.7 170 27.6
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.7e-07 59.3 193 28.0
AT5G46960 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.4e-07 58.5 180 28.3
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 8.3e-07 58.2 180 27.2
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 1.9e-06 57.0 161 29.2
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 2.4e-06 56.6 174 27.6
BolC7t43597H Brassica oleracea HOM05D008727 ORTHO05D040202 5.4e-06 55.5 57 47.4
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 5.4e-06 55.5 142 29.6


User provided reference genes

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