Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30600 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-35 152.5 80 100.0
BraA02t08078Z Brassica rapa HOM05D001445 ORTHO05D001261 1.6e-33 145.6 76 98.7
BraA02t08073Z Brassica rapa HOM05D001445 ORTHO05D001261 2.6e-31 138.3 77 93.5
BcaC03g16913 Brassica carinata HOM05D001445 ORTHO05D001261 5.9e-31 137.1 77 92.2
C02p48150 Brassica napus HOM05D001445 ORTHO05D001261 5.9e-31 137.1 77 92.2
BolC2t10847H Brassica oleracea HOM05D001445 ORTHO05D001261 5.9e-31 137.1 77 92.2
A02p30560 Brassica napus HOM05D001445 ORTHO05D001261 8.5e-30 133.3 77 93.5
A02p30580 Brassica napus HOM05D001445 ORTHO05D001261 2.3e-27 125.2 77 83.1
A02p30590 Brassica napus HOM05D001445 ORTHO05D001261 2.3e-27 125.2 77 83.1
BraA02t08076Z Brassica rapa HOM05D001445 ORTHO05D001261 3.0e-27 124.8 77 83.1
BcaB07g30808 Brassica carinata HOM05D001445 ORTHO05D001261 8.8e-27 123.2 77 81.8
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 3.3e-26 121.3 77 80.5
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 7.4e-26 120.2 77 79.2
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 7.4e-26 120.2 77 79.2
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-25 119.4 77 80.5
BolC3t18500H Brassica oleracea HOM05D001445 ORTHO05D001261 1.3e-25 119.4 77 79.2
BcaB08g36203 Brassica carinata HOM05D001445 ORTHO05D001261 2.2e-25 118.6 77 80.5
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 2.8e-25 118.2 77 80.5
C03p62420 Brassica napus HOM05D001445 ORTHO05D001261 3.7e-25 117.9 77 77.9
BcaC01g02648 Brassica carinata HOM05D001445 ORTHO05D001261 6.3e-25 117.1 70 84.3
Sp2g11750 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.8e-24 115.5 77 76.6
C02p47650 Brassica napus HOM05D001445 ORTHO05D001261 3.1e-24 114.8 77 76.6
BolC2t10801H Brassica oleracea HOM05D001445 ORTHO05D001261 3.1e-24 114.8 77 76.6
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 2.0e-23 112.1 77 75.3
Thhalv10001105m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.6e-23 111.7 77 75.3
Thhalv10001199m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 2.2e-22 108.6 77 74.0
Sp2g11730 Schrenkiella parvula HOM05D001445 ORTHO05D001261 1.1e-21 106.3 79 69.6
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 9.4e-21 103.2 77 71.4
AT5G46930 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 6.1e-20 100.5 77 66.2
BraA09t37874Z Brassica rapa HOM05D001445 ORTHO05D001261 7.9e-20 100.1 79 65.8
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 7.9e-20 100.1 79 68.4
A09p22690 Brassica napus HOM05D001445 ORTHO05D001261 1.0e-19 99.8 76 68.4
BolC9t55775H Brassica oleracea HOM05D001445 ORTHO05D001261 1.0e-19 99.8 77 68.8
AL8G11340 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 1.8e-19 99.0 77 66.2
BcaC04g21666 Brassica carinata HOM05D001445 ORTHO05D001261 1.3e-17 92.8 77 66.2
C09p29180 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-17 92.8 77 66.2
A06p45680 Brassica napus HOM05D001445 ORTHO05D001261 2.2e-17 92.0 77 62.3
BraA06t27437Z Brassica rapa HOM05D001445 ORTHO05D001261 2.2e-17 92.0 77 62.3
AL8G11320 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 2.8e-17 91.7 77 62.3
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 6.3e-17 90.5 76 63.2
Thhalv10001100m.g Eutrema salsugineum HOM05D001445 ORTHO05D001261 4.1e-16 87.8 79 59.5
BcaC06g31448 Brassica carinata HOM05D001445 ORTHO05D001261 5.3e-16 87.4 77 58.4
Sp2g11720 Schrenkiella parvula HOM05D001445 ORTHO05D001261 7.0e-16 87.0 79 57.0
Carub.0008s0092 Capsella rubella HOM05D001445 ORTHO05D001261 5.9e-15 84.0 77 58.4
CARHR174500 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.3e-14 82.8 77 58.4
Carub.0008s0089 Capsella rubella HOM05D001445 ORTHO05D001261 1.7e-14 82.4 77 54.5
AT5G46970 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 3.8e-14 81.3 77 55.8
AL8G11310 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 5.0e-14 80.9 77 53.2
C02p48090 Brassica napus HOM05D001445 ORTHO05D001261 6.5e-14 80.5 79 51.9
BolC2t10840H Brassica oleracea HOM05D001445 ORTHO05D001261 6.5e-14 80.5 79 51.9
A02p30500 Brassica napus HOM05D001445 ORTHO05D001261 8.5e-14 80.1 79 53.2
BraA02t08068Z Brassica rapa HOM05D001445 ORTHO05D001261 8.5e-14 80.1 79 53.2
AL8G11330 Arabidopsis lyrata HOM05D001445 ORTHO05D001261 4.2e-13 77.8 77 54.5
BcaC03g16906 Brassica carinata HOM05D001445 ORTHO05D001261 4.2e-13 77.8 71 54.9
Sp2g11760 Schrenkiella parvula HOM05D001445 ORTHO05D001261 5.5e-13 77.4 77 49.4
BcaB01g05448 Brassica carinata HOM05D001445 ORTHO05D001261 7.2e-13 77.0 79 55.7
Carub.0008s0091 Capsella rubella HOM05D001445 ORTHO05D001261 7.2e-13 77.0 78 55.1
BcaB07g30804 Brassica carinata HOM05D001445 ORTHO05D001261 2.7e-12 75.1 79 53.2
AT5G46950 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 8.0e-12 73.6 77 55.8
BraA09t37873Z Brassica rapa HOM05D001445 ORTHO05D001261 8.0e-12 73.6 79 53.2
BraA02t08077Z Brassica rapa HOM05D001445 ORTHO05D001261 1.0e-11 73.2 42 83.3
AT5G46960 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 1.4e-11 72.8 77 57.1
BolC9t55774H Brassica oleracea HOM05D001445 ORTHO05D001261 1.4e-11 72.8 79 53.2
A09p22680 Brassica napus HOM05D001445 ORTHO05D001261 4.0e-11 71.2 79 51.9
BcaC06g31431 Brassica carinata HOM05D001445 ORTHO05D001261 5.2e-11 70.9 80 47.5
C09p29170 Brassica napus HOM05D001445 ORTHO05D001261 6.7e-11 70.5 79 51.9
CARHR089510 Cardamine hirsuta HOM05D001445 ORTHO05D001261 1.5e-10 69.3 61 59.0
AT5G46940 Arabidopsis thaliana HOM05D001445 ORTHO05D001261 3.3e-10 68.2 77 48.1
CARHR174480 Cardamine hirsuta HOM05D001445 ORTHO05D001261 5.7e-10 67.4 77 48.1
BcaC04g21667 Brassica carinata HOM05D001445 ORTHO05D001261 7.5e-10 67.0 79 49.4
BcaC06g34307 Brassica carinata HOM05D001445 ORTHO05D001261 1.1e-08 63.2 81 45.7
A06p45450 Brassica napus HOM05D001445 ORTHO05D001261 1.8e-08 62.4 81 45.7
BraA06t27413Z Brassica rapa HOM05D001445 ORTHO05D001261 1.8e-08 62.4 81 45.7
Aa31sc241G40 Aethionema arabicum HOM05D001445 ORTHO05D001261 2.4e-08 62.0 72 51.4
C07p30520 Brassica napus HOM05D001445 ORTHO05D001261 3.1e-08 61.6 81 44.4
BolC7t43593H Brassica oleracea HOM05D001445 ORTHO05D001261 3.1e-08 61.6 81 44.4
Aa31sc241G60 Aethionema arabicum HOM05D001445 ORTHO05D001261 5.3e-08 60.8 72 50.0
Thecc.03G235500 Theobroma cacao HOM05D001445 ORTHO05D001261 7.0e-08 60.5 78 47.4
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.2e-07 59.7 73 43.8
TWI15G1112 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 3.5e-07 58.2 79 39.2
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 4.5e-07 57.8 71 47.9
Ciclev10033644m.g Citrus clementina HOM05D001445 ORTHO05D001261 5.9e-07 57.4 73 45.2
Duzib205G0415 Durio zibethinus HOM05D001445 ORTHO05D001261 5.9e-07 57.4 71 43.7
Nn1g02148 Nelumbo nucifera HOM05D001445 ORTHO05D001261 7.7e-07 57.0 73 41.1
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 1.0e-06 56.6 69 44.9
Gohir.D03G169433 Gossypium hirsutum HOM05D001445 ORTHO05D001261 1.0e-06 56.6 72 40.3
Gorai.003G179700 Gossypium raimondii HOM05D001445 ORTHO05D001261 1.0e-06 56.6 72 40.3
MD06G1042400 Malus domestica HOM05D001445 ORTHO05D001261 1.3e-06 56.2 82 41.5
Medtr4g099010 Medicago truncatula HOM05D001445 ORTHO05D001261 1.3e-06 56.2 81 45.7
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.3e-06 56.2 78 43.6
Sc07g0008920 Simmondsia chinensis HOM05D001445 ORTHO05D001261 1.3e-06 56.2 78 42.3
Aa31LG9G5990 Aethionema arabicum HOM05D001445 ORTHO05D001261 1.7e-06 55.8 76 44.7
Phvul.006G071800 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 2.9e-06 55.1 82 45.1
COL.COLO4_17126 Corchorus olitorius HOM05D001445 ORTHO05D001261 5.0e-06 54.3 71 46.5
Sc07g0008940 Simmondsia chinensis HOM05D001445 ORTHO05D001261 8.5e-06 53.5 74 40.5


User provided reference genes

Program Settings