Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30520 Brassica napus HOM05D009070 ORTHO05D010560 2.1e-82 308.9 150 100.0
BraA02t08070Z Brassica rapa HOM05D009070 ORTHO05D010560 1.8e-81 305.8 150 98.7
BcaC03g16907 Brassica carinata HOM05D009070 ORTHO05D010560 2.8e-74 282.0 148 91.9
C02p48100 Brassica napus HOM05D009070 ORTHO05D010560 1.8e-73 279.3 151 90.7
BolC2t10841H Brassica oleracea HOM05D009070 ORTHO05D010560 1.6e-69 266.2 151 87.4
BolC7t43595H Brassica oleracea HOM05D009070 ORTHO05D010560 1.5e-35 153.3 145 51.0
C07p30530 Brassica napus HOM05D009070 ORTHO05D010560 5.6e-35 151.4 145 50.3
A06p45440 Brassica napus HOM05D009070 ORTHO05D010560 9.6e-35 150.6 145 49.0
BcaC06g34305 Brassica carinata HOM05D009070 ORTHO05D010560 2.1e-34 149.4 145 49.0
BraA06t27412Z Brassica rapa HOM05D009070 ORTHO05D010560 3.1e-33 145.6 145 47.6
Thhalv10001063m.g Eutrema salsugineum HOM05D009070 ORTHO05D010560 1.7e-31 139.8 145 46.9
C07p31240 Brassica napus HOM05D009070 ORTHO05D010560 4.9e-31 138.3 148 50.0
BcaC06g31365 Brassica carinata HOM05D009070 ORTHO05D010560 6.4e-31 137.9 144 50.0
BolC7t43665H Brassica oleracea HOM05D009070 ORTHO05D010560 8.4e-31 137.5 148 50.0
BcaC06g31338 Brassica carinata HOM05D009070 ORTHO05D010560 1.4e-30 136.7 123 52.8
A06p44940 Brassica napus HOM05D009070 ORTHO05D010560 9.3e-30 134.0 148 48.0
BraA06t27365Z Brassica rapa HOM05D009070 ORTHO05D010560 9.3e-30 134.0 148 48.0
BcaC06g31430 Brassica carinata HOM05D009070 ORTHO05D010560 1.2e-29 133.7 123 51.2
BcaC06g31339 Brassica carinata HOM05D009070 ORTHO05D010560 4.6e-29 131.7 148 47.3
Sp2g12310 Schrenkiella parvula HOM05D009070 ORTHO05D010560 1.5e-27 126.7 145 46.9
AL8G10370 Arabidopsis lyrata HOM05D009070 ORTHO05D010560 2.6e-24 115.9 119 47.9
AT5G47600 Arabidopsis thaliana HOM05D009070 ORTHO05D010560 2.2e-23 112.8 106 50.9
BcaC06g31355 Brassica carinata HOM05D009070 ORTHO05D010560 2.9e-23 112.5 118 46.6
Carub.0008s0019 Capsella rubella HOM05D009070 ORTHO05D010560 2.9e-23 112.5 120 47.5
CARHR173720 Cardamine hirsuta HOM05D009070 ORTHO05D010560 1.6e-21 106.7 123 45.5
CARHR173750 Cardamine hirsuta HOM05D009070 ORTHO05D010560 2.1e-21 106.3 109 45.9
THA.LOC104812801 Tarenaya hassleriana HOM05D009070 ORTHO05D010560 6.3e-18 94.7 96 43.8
Aa31LG9G5420 Aethionema arabicum HOM05D009070 ORTHO05D010560 4.5e-16 88.6 95 45.3
BcaC05g26794 Brassica carinata HOM05D009070 ORTHO05D010560 4.6e-13 78.6 116 37.9
Actinidia02127 Actinidia chinensis HOM05D009070 ORTHO05D010560 1.1e-09 67.4 96 35.4
BcaB08g35845 Brassica carinata HOM05D009070 ORTHO05D010560 6.9e-09 64.7 65 49.2
Rhsim05G0054600 Rhododendron simsii HOM05D009070 ORTHO05D010560 7.7e-08 61.2 96 33.3
QL12p012439 Quercus lobata HOM05D001099 ORTHO05D000958 1.1e-06 57.4 106 30.2
C03p42220 Brassica napus HOM05D009070 ORTHO05D010560 1.9e-06 56.6 70 44.3
TAR082G0002 Trochodendron aralioides HOM05D001099 ORTHO05D000958 1.9e-06 56.6 113 27.4
Cfa012707 Carpinus fangiana HOM05D001099 ORTHO05D000958 2.5e-06 56.2 98 29.6
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 2.5e-06 56.2 101 29.7
Dinv39137 Davidia involucrata HOM05D001099 ORTHO05D010560 3.2e-06 55.8 108 30.6
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.2e-06 55.5 97 30.9
COL.COLO4_37189 Corchorus olitorius HOM05D001099 ORTHO05D000958 5.5e-06 55.1 93 26.9
Sp6g13600 Schrenkiella parvula HOM05D001099 ORTHO05D000958 5.5e-06 55.1 99 31.3
DCAR_027781 Daucus carota HOM05D001099 ORTHO05D000958 7.2e-06 54.7 106 31.1
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 7.2e-06 54.7 103 23.3
Rhsim09G0039000 Rhododendron simsii HOM05D007337 ORTHO05D000958 7.2e-06 54.7 102 30.4
CARHR264170 Cardamine hirsuta HOM05D001099 ORTHO05D000958 9.4e-06 54.3 100 29.0


User provided reference genes

Program Settings