Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p30210 Brassica napus HOM05D005674 ORTHO05D007015 1.4e-145 520.4 466 100.0
BraA02t08037Z Brassica rapa HOM05D005674 ORTHO05D007015 2.1e-144 516.5 466 88.8
C02p47730 Brassica napus HOM05D005674 ORTHO05D007015 3.9e-135 485.7 466 76.4
BolC2t10809H Brassica oleracea HOM05D005674 ORTHO05D007015 3.9e-135 485.7 466 76.4
BcaC03g16871 Brassica carinata HOM05D005674 ORTHO05D007015 1.1e-124 451.1 466 73.4
AL8G11670 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 1.5e-115 420.6 469 85.1
CARHR174820 Cardamine hirsuta HOM05D005674 ORTHO05D007015 1.3e-109 401.0 469 69.7
Sp2g11490 Schrenkiella parvula HOM05D005674 ORTHO05D007015 9.1e-108 394.8 469 73.1
AT5G46680 Arabidopsis thaliana HOM05D005674 ORTHO05D007015 2.9e-106 389.8 469 84.2
Carub.0008s0124 Capsella rubella HOM05D005674 ORTHO05D007015 1.1e-100 371.3 469 71.9
Thhalv10001221m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 2.6e-86 323.6 459 76.3
Aa31LG6G670 Aethionema arabicum HOM05D005674 ORTHO05D007015 4.6e-75 286.2 460 68.9
BcaC06g33618 Brassica carinata HOM05D005674 ORTHO05D007015 3.3e-57 226.9 459 60.3
Aa31LG10G3050 Aethionema arabicum HOM05D005674 ORTHO05D007015 9.5e-57 225.3 458 71.8
CARHR224650 Cardamine hirsuta HOM05D005674 ORTHO05D007015 5.4e-52 209.5 464 58.2
Thhalv10025145m.g Eutrema salsugineum HOM05D005674 ORTHO05D007015 1.1e-49 201.8 457 58.9
AL7G36590 Arabidopsis lyrata HOM05D005674 ORTHO05D007015 3.4e-46 190.3 464 66.2
Sp7g16190 Schrenkiella parvula HOM05D005674 ORTHO05D007015 2.4e-44 184.1 457 66.5
Carub.0007s2342 Capsella rubella HOM05D005674 ORTHO05D007015 2.1e-43 181.0 464 64.9
BolC7t45434H Brassica oleracea HOM05D005674 ORTHO05D007015 1.3e-42 178.3 459 66.0
A03p50860 Brassica napus HOM05D005674 ORTHO05D007015 1.1e-41 175.3 457 66.1
BraA03t14173Z Brassica rapa HOM05D005674 ORTHO05D007015 1.1e-41 175.3 457 66.1
C07p49250 Brassica napus HOM05D005674 ORTHO05D007015 3.6e-40 170.2 459 65.4
TPR.G15161 Trifolium pratense HOM05D005674 ORTHO05D007015 7.1e-28 129.4 457 38.9
CAN.G1360.18 Capsicum annuum HOM05D005674 ORTHO05D007015 4.6e-27 126.7 442 45.2
BcaC06g31458 Brassica carinata HOM05D005674 ORTHO05D007015 9.6e-25 119.0 84 75.0
TPR.G14745 Trifolium pratense HOM05D005674 ORTHO05D007015 1.3e-24 118.6 174 62.6
THA.LOC104806715 Tarenaya hassleriana HOM05D005674 ORTHO05D007015 4.0e-23 113.6 181 63.0
Psat0s443g0080 Pisum sativum HOM05D005674 ORTHO05D007015 2.6e-22 110.9 172 59.9
Lj3g0025693 Lotus japonicus HOM05D005674 ORTHO05D007015 7.6e-22 109.4 172 60.5
Medtr7g024140 Medicago truncatula HOM05D005674 ORTHO05D007015 7.6e-22 109.4 176 55.7
Migut.F00129 Erythranthe guttata HOM05D005674 ORTHO05D007015 1.7e-21 108.2 177 47.5
Glyma.03G075500 Glycine max HOM05D005674 ORTHO05D007015 1.9e-20 104.8 170 61.8
CSS0001557 Camellia sinensis var. sinensis HOM05D005674 ORTHO05D007015 1.2e-19 102.1 66 72.7
MD07G1055100 Malus domestica HOM05D005674 ORTHO05D007015 2.1e-19 101.3 74 66.2
GSVIVG01024415001 Vitis vinifera HOM05D005674 ORTHO05D007015 1.0e-18 99.0 66 71.2
Gohir.A10G242800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 5.1e-18 96.7 75 65.3
Gorai.011G295800 Gossypium raimondii HOM05D005674 ORTHO05D007015 5.1e-18 96.7 74 66.2
MD15G1427800 Malus domestica HOM05D005674 ORTHO05D007015 6.7e-18 96.3 72 65.3
Potri.006G006500 Populus trichocarpa HOM05D005674 ORTHO05D007015 1.1e-17 95.5 68 63.2
Hund00863 Selenicereus undatus HOM05D005674 ORTHO05D007015 1.5e-17 95.1 153 44.4
Lalb_Chr01g0007701 Lupinus albus HOM05D005674 ORTHO05D007015 1.9e-17 94.7 68 67.6
Prupe.4G280300 Prunus persica HOM05D005674 ORTHO05D007015 1.9e-17 94.7 72 65.3
Gohir.D10G254800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 2.5e-17 94.4 74 64.9
Sabra06G0005200 Salix brachista HOM05D005674 ORTHO05D007015 3.3e-17 94.0 68 63.2
Duzib116G0841 Durio zibethinus HOM05D005674 ORTHO05D007015 4.3e-17 93.6 68 60.3
SalBow4G2062 Salvia bowleyana HOM05D005674 ORTHO05D007015 7.4e-17 92.8 69 63.8
Duzib160G0406 Durio zibethinus HOM05D005674 ORTHO05D007015 9.6e-17 92.4 65 61.5
SGA_v2.0_scaffold18G08491 Striga asiatica HOM05D005674 ORTHO05D007015 9.6e-17 92.4 68 60.3
TWI12G0566 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 9.6e-17 92.4 67 62.7
CANSAT54G2399 Cannabis sativa HOM05D005674 ORTHO05D007015 1.3e-16 92.0 66 57.6
Gohir.D13G161800 Gossypium hirsutum HOM05D005674 ORTHO05D007015 2.1e-16 91.3 74 63.5
Gorai.013G183800 Gossypium raimondii HOM05D005674 ORTHO05D007015 2.1e-16 91.3 74 63.5
Solyc02g086230.2 Solanum lycopersicum HOM05D005674 ORTHO05D007015 2.8e-16 90.9 68 57.4
Sopen02g030910 Solanum pennellii HOM05D005674 ORTHO05D007015 2.8e-16 90.9 68 57.4
PGSC0003DMG401020415 Solanum tuberosum HOM05D005674 ORTHO05D007015 2.8e-16 90.9 68 57.4
Solyc07g055220.3 Solanum lycopersicum HOM05D005674 ORTHO05D007015 6.3e-16 89.7 67 58.2
Sopen07g027000 Solanum pennellii HOM05D005674 ORTHO05D007015 6.3e-16 89.7 67 58.2
PGSC0003DMG400026386 Solanum tuberosum HOM05D005674 ORTHO05D007015 1.1e-15 89.0 67 55.2
Ca_14577_v3 Cicer arietinum L. HOM05D005674 ORTHO05D007015 1.4e-15 88.6 166 56.6
arahy.Tifrunner.gnm1.ann1.I145LQ Arachis hypogaea HOM05D005674 ORTHO05D007015 2.4e-15 87.8 68 58.8
Eucgr.K01145 Eucalyptus grandis HOM05D005674 ORTHO05D007015 2.4e-15 87.8 74 63.5
CiPaw.03G192600 Carya illinoinensis HOM05D005674 ORTHO05D007015 3.1e-15 87.4 77 59.7
CAN.G1360.17 Capsicum annuum HOM05D001556 ORTHO05D001505 4.1e-15 87.0 191 50.3
Ciclev10008244m.g Citrus clementina HOM05D005674 ORTHO05D007015 4.1e-15 87.0 68 57.4
MELO3C020050.2 Cucumis melo HOM05D005674 ORTHO05D007015 4.1e-15 87.0 68 61.8
FvH4_6g27690 Fragaria vesca HOM05D005674 ORTHO05D007015 5.3e-15 86.7 72 61.1
Cfa012588 Carpinus fangiana HOM05D005674 ORTHO05D007015 6.9e-15 86.3 67 59.7
CsaV3_5G005440 Cucumis sativus L. HOM05D005674 ORTHO05D007015 2.0e-14 84.7 68 58.8
PGR142G3640 Punica granatum HOM05D005674 ORTHO05D007015 2.0e-14 84.7 63 61.9
Gohir.A13G157000 Gossypium hirsutum HOM05D005674 ORTHO05D007015 5.9e-14 83.2 74 59.5
DCAR_018956 Daucus carota HOM05D005674 ORTHO05D007015 7.6e-14 82.8 78 52.6
RcHm_v2.0_Chr2g0130841 Rosa chinensis HOM05D005674 ORTHO05D007015 7.6e-14 82.8 79 53.2
arahy.Tifrunner.gnm1.ann1.MAGV51 Arachis hypogaea HOM05D005674 ORTHO05D007015 1.0e-13 82.4 68 55.9
ClCG07G002660 Citrullus lanatus HOM05D005674 ORTHO05D007015 1.0e-13 82.4 80 51.2
Aqoxy3G02039 Aquilegia oxysepala HOM05D005674 ORTHO05D007015 1.7e-13 81.6 71 53.5
Thecc.01G153300 Theobroma cacao HOM05D005674 ORTHO05D007015 2.2e-13 81.3 74 58.1
Prupe.3G114500 Prunus persica HOM05D005674 ORTHO05D007015 2.9e-13 80.9 79 50.6
CsaV3_4G030900 Cucumis sativus L. HOM05D005674 ORTHO05D007015 6.5e-13 79.7 77 53.2
Manes.08G068200 Manihot esculenta HOM05D005674 ORTHO05D007015 6.5e-13 79.7 76 53.9
Manes.09G079700 Manihot esculenta HOM05D005674 ORTHO05D007015 6.5e-13 79.7 77 53.2
arahy.Tifrunner.gnm1.ann1.U482D3 Arachis hypogaea HOM05D005674 ORTHO05D007015 8.5e-13 79.3 63 57.1
Cpa.g.sc90.66 Carica papaya HOM05D005674 ORTHO05D007015 8.5e-13 79.3 167 29.3
Lj1P677T28 Lonicera japonica HOM05D005674 ORTHO05D007015 8.5e-13 79.3 77 51.9
Sed0008626 Sechium edule HOM05D005674 ORTHO05D007015 1.1e-12 79.0 49 77.6
ECA240G0139 Erigeron canadensis HOM05D005674 ORTHO05D007015 2.5e-12 77.8 77 50.6
Dinv12372 Davidia involucrata HOM05D005674 ORTHO05D007015 4.2e-12 77.0 74 55.4
QL08p042254 Quercus lobata HOM05D005674 ORTHO05D007015 5.5e-12 76.6 77 55.8
Lsat_1_v5_gn_3_116841 Lactuca sativa HOM05D005674 ORTHO05D007015 7.2e-12 76.3 75 48.0
Peaxi162Scf00888g00007 Petunia axillaris HOM05D005674 ORTHO05D007015 7.2e-12 76.3 172 52.3
Atru.chr7.2335 Acer truncatum HOM05D005674 ORTHO05D007015 9.3e-12 75.9 84 48.8
Actinidia00858 Actinidia chinensis HOM05D005674 ORTHO05D007015 1.2e-11 75.5 77 51.9
Sed0024338 Sechium edule HOM05D005674 ORTHO05D007015 1.2e-11 75.5 77 51.9
PSO063G6562 Papaver somniferum HOM05D005674 ORTHO05D007015 2.1e-11 74.7 66 56.1
Phvul.009G126100 Phaseolus vulgaris HOM05D005674 ORTHO05D007015 2.7e-11 74.3 172 52.9
MELO3C033809.2 Cucumis melo HOM05D005674 ORTHO05D007015 4.6e-11 73.6 61 55.7
Hma1.2p1_0067F.1_g036940 Hydrangea macrophylla HOM05D005674 ORTHO05D007015 4.6e-11 73.6 77 50.6
Sc04g0009990 Simmondsia chinensis HOM05D005674 ORTHO05D007015 4.6e-11 73.6 76 51.3
PSO782G5737 Papaver somniferum HOM05D005674 ORTHO05D007015 6.1e-11 73.2 66 54.5
ATR1132G073 Amborella trichopoda HOM05D005674 ORTHO05D007015 7.9e-11 72.8 51 68.6
CsaV3_5G013070 Cucumis sativus L. HOM05D005674 ORTHO05D007015 7.9e-11 72.8 52 63.5
CsaV3_UNG017130 Cucumis sativus L. HOM05D005674 ORTHO05D007015 7.9e-11 72.8 52 63.5
Psat5g177920 Pisum sativum HOM05D005674 ORTHO05D007015 7.9e-11 72.8 56 58.9
arahy.Tifrunner.gnm1.ann1.JH6JIJ Arachis hypogaea HOM05D005674 ORTHO05D007015 1.0e-10 72.4 78 42.3
TWI31G0445 Tripterygium wilfordii HOM05D005674 ORTHO05D007015 1.8e-10 71.6 51 60.8
HanXRQChr13g0421081 Helianthus annuus HOM05D005674 ORTHO05D007015 2.3e-10 71.2 74 45.9
VMungo1309G1849 Vigna mungo HOM05D005674 ORTHO05D007015 2.3e-10 71.2 172 52.9
Nn2g12528 Nelumbo nucifera HOM05D005674 ORTHO05D007015 3.0e-10 70.9 49 71.4
Rhsim04G0075800 Rhododendron simsii HOM05D005674 ORTHO05D007015 3.0e-10 70.9 77 46.8
COL.COLO4_33609 Corchorus olitorius HOM05D005674 ORTHO05D007015 3.9e-10 70.5 49 69.4
MBI15_g37633_MAGBIO Magnolia biondii HOM05D000146 ORTHO05D000178 3.9e-10 70.5 44 77.3
CAN.G1034.39 Capsicum annuum HOM05D005674 ORTHO05D033540 5.1e-10 70.1 149 61.7
Dinv11955 Davidia involucrata HOM05D005674 ORTHO05D007015 6.7e-10 69.7 69 55.1
TAR627G1060 Trochodendron aralioides HOM05D005674 ORTHO05D007015 6.7e-10 69.7 77 44.2
AUR62024049 Chenopodium quinoa HOM05D005674 ORTHO05D007015 1.1e-09 68.9 44 72.7
AUR62040438 Chenopodium quinoa HOM05D005674 ORTHO05D007015 1.1e-09 68.9 44 72.7
Cc05_g08520 Coffea canephora HOM05D005674 ORTHO05D007015 2.5e-09 67.8 77 42.9
FAN23G2012 Fragaria x ananassa HOM05D005674 ORTHO05D007015 7.4e-09 66.2 56 55.4
TAR626G0412 Trochodendron aralioides HOM05D005674 ORTHO05D007015 7.4e-09 66.2 43 72.1
MELO3C033079.2 Cucumis melo HOM05D005674 ORTHO05D031076 9.7e-09 65.9 47 66.0
Nitab4.5_0007923g0040 Nicotiana tabacum HOM05D005674 ORTHO05D007015 9.7e-09 65.9 79 43.0
CAN.G625.40 Capsicum annuum HOM05D005674 ORTHO05D007015 2.2e-08 64.7 46 58.7
HPP92_017208 Vanilla planifolia HOM05D005674 ORTHO05D007015 3.7e-08 63.9 43 67.4
Lalb_Chr19g0127261 Lupinus albus HOM05D005674 ORTHO05D007015 4.8e-08 63.5 151 29.1
Nitab4.5_0000753g0050 Nicotiana tabacum HOM05D005674 ORTHO05D007015 1.4e-07 62.0 40 62.5
Nitab4.5_0000249g0090 Nicotiana tabacum HOM05D005674 ORTHO05D007015 3.1e-07 60.8 39 66.7
Os02g0793200 Oryza sativa ssp. japonica HOM05D005674 ORTHO05D007015 5.3e-07 60.1 70 41.4
Lalb_Chr06g0171701 Lupinus albus HOM05D005674 ORTHO05D007015 6.9e-07 59.7 138 59.4
Zm00001eb201010 Zea mays HOM05D005674 ORTHO05D007015 9.0e-07 59.3 51 51.0
Lalb_Chr01g0013691 Lupinus albus HOM05D001514 ORTHO05D007015 2.6e-06 57.8 45 62.2
Nitab4.5_0007990g0010 Nicotiana tabacum HOM05D005674 ORTHO05D007015 5.9e-06 56.6 40 57.5


User provided reference genes

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