Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p29190 Brassica napus HOM05D001176 ORTHO05D014361 1.2e-65 253.1 129 100.0
C05p62050 Brassica napus HOM05D001176 ORTHO05D014361 3.0e-37 158.7 133 69.2
BcaC01g01099 Brassica carinata HOM05D001176 ORTHO05D014361 1.2e-36 156.8 114 72.8
C03p88080 Brassica napus HOM05D001176 ORTHO05D014361 1.2e-36 156.8 114 72.8
BraA08t33160Z Brassica rapa HOM05D001176 ORTHO05D008595 4.8e-35 151.4 143 62.9
A08p11660 Brassica napus HOM05D001176 ORTHO05D008595 8.3e-35 150.6 137 63.5
BcaC09g48232 Brassica carinata HOM05D001176 ORTHO05D014361 1.8e-34 149.4 131 64.9
BcaB04g18283 Brassica carinata HOM05D001176 ORTHO05D008595 1.6e-33 146.4 137 62.0
BcaC07g37875 Brassica carinata HOM05D001176 ORTHO05D008595 1.6e-33 146.4 137 62.0
BolC8t48268H Brassica oleracea HOM05D001176 ORTHO05D008595 1.6e-33 146.4 137 62.0
Thhalv10024764m.g Eutrema salsugineum HOM05D001176 ORTHO05D008595 1.0e-32 143.7 137 59.9
CARHR221850 Cardamine hirsuta HOM05D001176 ORTHO05D008595 3.2e-31 138.7 143 55.2
Sp7g13340 Schrenkiella parvula HOM05D001176 ORTHO05D008595 4.2e-31 138.3 137 59.9
A06p19270 Brassica napus HOM05D001600 ORTHO05D001502 3.0e-29 132.1 76 89.5
Aa31LG9G2280 Aethionema arabicum HOM05D001176 ORTHO05D008595 1.2e-28 130.2 135 56.3
Carub.0007s2688 Capsella rubella HOM05D001176 ORTHO05D008595 2.6e-28 129.0 134 56.7
AT4G15110 Arabidopsis thaliana HOM05D001176 ORTHO05D008595 4.9e-27 124.8 148 50.7
BolC4t22238H Brassica oleracea HOM05D001176 ORTHO05D014361 6.3e-27 124.4 73 87.7
Nitab4.5_0003650g0010 Nicotiana tabacum HOM05D001176 ORTHO05D008595 4.1e-26 121.7 160 47.5
AL7G40600 Arabidopsis lyrata HOM05D001176 ORTHO05D008595 2.7e-25 119.0 142 52.1
Nn7g38268 Nelumbo nucifera HOM05D001176 ORTHO05D008595 2.7e-25 119.0 132 51.5
Gorai.001G213800 Gossypium raimondii HOM05D001176 ORTHO05D008595 3.5e-25 118.6 127 52.8
Thecc.01G173300 Theobroma cacao HOM05D001176 ORTHO05D008595 3.5e-25 118.6 131 51.9
Dinv44680 Davidia involucrata HOM05D001176 ORTHO05D008595 4.5e-25 118.2 148 49.3
QL04p062166 Quercus lobata HOM05D001176 ORTHO05D008595 4.5e-25 118.2 134 51.5
Solyc05g016330.3 Solanum lycopersicum HOM05D001176 ORTHO05D008595 4.5e-25 118.2 151 45.7
Duzib138G1658 Durio zibethinus HOM05D001176 ORTHO05D008595 5.9e-25 117.9 127 52.8
Sopen05g013440 Solanum pennellii HOM05D001176 ORTHO05D014361 5.9e-25 117.9 151 45.7
Sed0015103 Sechium edule HOM05D001176 ORTHO05D008595 1.0e-24 117.1 126 51.6
PGSC0003DMG400024342 Solanum tuberosum HOM05D001176 ORTHO05D008595 1.0e-24 117.1 151 46.4
THA.LOC104808510 Tarenaya hassleriana HOM05D001176 ORTHO05D008595 1.0e-24 117.1 143 49.7
Atru.chr8.1001 Acer truncatum HOM05D001176 ORTHO05D008595 1.3e-24 116.7 150 47.3
Aqoxy2G00588 Aquilegia oxysepala HOM05D001176 ORTHO05D008595 1.3e-24 116.7 126 50.8
Gohir.A07G184400 Gossypium hirsutum HOM05D001176 ORTHO05D008595 1.3e-24 116.7 127 52.0
Gohir.D07G191200 Gossypium hirsutum HOM05D001176 ORTHO05D008595 1.3e-24 116.7 127 52.0
PGR031G0231 Punica granatum HOM05D001176 ORTHO05D008595 1.3e-24 116.7 131 51.1
Ciclev10011353m.g Citrus clementina HOM05D001176 ORTHO05D008595 1.7e-24 116.3 131 50.4
MBI18_g31363_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D008595 2.3e-24 115.9 150 48.0
Eucgr.A00911 Eucalyptus grandis HOM05D001176 ORTHO05D008595 2.9e-24 115.5 154 48.7
Sc03g0005510 Simmondsia chinensis HOM05D001176 ORTHO05D008595 2.9e-24 115.5 135 51.1
HanXRQChr01g0025791 Helianthus annuus HOM05D001176 ORTHO05D008595 3.8e-24 115.2 157 47.1
LjContig00222g0002891 Lotus japonicus HOM05D001176 ORTHO05D008595 3.8e-24 115.2 127 52.8
Haze_13645 Corylus avellana HOM05D001176 ORTHO05D008595 5.0e-24 114.8 145 47.6
CiPaw.04G072600 Carya illinoinensis HOM05D001176 ORTHO05D008595 6.6e-24 114.4 139 48.9
ECA248G2999 Erigeron canadensis HOM05D001176 ORTHO05D008595 6.6e-24 114.4 127 54.3
FAN02G3300 Fragaria x ananassa HOM05D001176 ORTHO05D008595 6.6e-24 114.4 149 47.7
FAN05G2373 Fragaria x ananassa HOM05D001176 ORTHO05D008595 6.6e-24 114.4 149 47.7
MD17G1129200 Malus domestica HOM05D001176 ORTHO05D008595 6.6e-24 114.4 134 49.3
FvH4_6g39510 Fragaria vesca HOM05D001176 ORTHO05D008595 8.6e-24 114.0 149 47.7
FAN14G2976 Fragaria x ananassa HOM05D001176 ORTHO05D008595 8.6e-24 114.0 149 47.7
Peaxi162Scf00322g00310 Petunia axillaris HOM05D001176 ORTHO05D008595 8.6e-24 114.0 128 48.4
CsaV3_4G007300 Cucumis sativus L. HOM05D001176 ORTHO05D008595 1.1e-23 113.6 126 50.0
RcHm_v2.0_Chr2g0153541 Rosa chinensis HOM05D001176 ORTHO05D008595 1.5e-23 113.2 149 46.3
TWI32G0878 Tripterygium wilfordii HOM05D001176 ORTHO05D008595 1.5e-23 113.2 151 46.4
CAN.G1272.1 Capsicum annuum HOM05D001176 ORTHO05D008595 3.3e-23 112.1 148 46.6
ClCG07G010970 Citrullus lanatus HOM05D001176 ORTHO05D008595 3.3e-23 112.1 126 50.0
Phvul.002G165400 Phaseolus vulgaris HOM05D001176 ORTHO05D008595 3.3e-23 112.1 150 48.7
arahy.Tifrunner.gnm1.ann1.M1JRW6 Arachis hypogaea HOM05D001176 ORTHO05D008595 4.3e-23 111.7 129 51.9
arahy.Tifrunner.gnm1.ann1.NAXY0P Arachis hypogaea HOM05D001176 ORTHO05D008595 4.3e-23 111.7 129 51.9
PSO675G4847 Papaver somniferum HOM05D001176 ORTHO05D008595 4.3e-23 111.7 159 45.3
Glyma.11G016200 Glycine max HOM05D001176 ORTHO05D008595 5.6e-23 111.3 127 52.0
Cfa022496 Carpinus fangiana HOM05D001176 ORTHO05D008595 7.3e-23 110.9 153 45.1
Sopen11g017990 Solanum pennellii HOM05D001176 ORTHO05D014361 7.3e-23 110.9 161 44.1
GSVIVG01015850001 Vitis vinifera HOM05D001176 ORTHO05D008595 7.3e-23 110.9 139 49.6
Rhsim12G0014900 Rhododendron simsii HOM05D001176 ORTHO05D008595 9.5e-23 110.5 127 52.0
VMungo1215G2273 Vigna mungo HOM05D001176 ORTHO05D008595 9.5e-23 110.5 127 52.0
MSTRG.6599 Avicennia marina HOM05D001176 ORTHO05D008595 1.6e-22 109.8 130 53.1
Cpa.g.sc8.285 Carica papaya HOM05D001176 ORTHO05D008595 1.6e-22 109.8 144 47.2
SalBow7G2432 Salvia bowleyana HOM05D001176 ORTHO05D008595 1.6e-22 109.8 136 51.5
Ah.03g147660 Amaranthus hybridus HOM05D001176 ORTHO05D008595 2.1e-22 109.4 125 51.2
Lsat_1_v5_gn_1_58321 Lactuca sativa HOM05D001176 ORTHO05D008595 2.1e-22 109.4 127 52.0
CSS0022319 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D008595 3.6e-22 108.6 129 50.4
CSS0028297 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D008595 3.6e-22 108.6 129 50.4
CANSAT64G1576 Cannabis sativa HOM05D001176 ORTHO05D008595 3.6e-22 108.6 129 50.4
Manes.09G079657 Manihot esculenta HOM05D001176 ORTHO05D008595 3.6e-22 108.6 146 46.6
Cc05_g00020 Coffea canephora HOM05D001176 ORTHO05D008595 6.1e-22 107.8 127 48.0
Potri.006G006200 Populus trichocarpa HOM05D001176 ORTHO05D008595 3.0e-21 105.5 126 49.2
Prupe.3G185900 Prunus persica HOM05D001176 ORTHO05D008595 3.0e-21 105.5 150 45.3
Ca_24495_v3 Cicer arietinum L. HOM05D001176 ORTHO05D008595 6.8e-21 104.4 128 50.0
ATR0815G009 Amborella trichopoda HOM05D001176 ORTHO05D008595 8.9e-21 104.0 126 48.4
Actinidia12511 Actinidia chinensis HOM05D001176 ORTHO05D008595 1.2e-20 103.6 127 48.8
DCAR_013342 Daucus carota HOM05D001176 ORTHO05D008595 2.0e-20 102.8 159 44.7
Migut.M00093 Erythranthe guttata HOM05D001176 ORTHO05D008595 2.0e-20 102.8 130 50.0
Medtr5g009110 Medicago truncatula HOM05D001176 ORTHO05D008595 2.6e-20 102.4 141 44.7
vmacro08759 Vaccinium macrocarpon HOM05D001176 ORTHO05D008595 2.6e-20 102.4 175 41.1
Zm00001eb207080 Zea mays HOM05D001176 ORTHO05D008595 1.3e-19 100.1 144 44.4
SGA_v2.0_scaffold73G24426 Striga asiatica HOM05D001176 ORTHO05D008595 1.7e-19 99.8 128 48.4
Lj1A1044G23 Lonicera japonica HOM05D001176 ORTHO05D008595 2.2e-19 99.4 151 43.7
TPR.G38037 Trifolium pratense HOM05D001176 ORTHO05D008595 2.2e-19 99.4 131 46.6
Psat2g186080 Pisum sativum HOM05D001176 ORTHO05D008595 3.7e-19 98.6 128 46.9
Nitab4.5_0000019g0160 Nicotiana tabacum HOM05D001176 ORTHO05D008595 6.4e-19 97.8 111 49.5
Pp3c4_28160 Physcomitrium patens HOM05D001176 ORTHO05D008595 1.4e-18 96.7 133 43.6
Lalb_Chr05g0211481 Lupinus albus HOM05D001176 ORTHO05D008595 2.4e-18 95.9 126 44.4
AagrBONN_evm.TU.Sc2ySwM_117.2648 Anthoceros agrestis HOM05D001176 ORTHO05D008595 4.1e-18 95.1 133 42.9
BcaC02g12620 Brassica carinata HOM05D001176 ORTHO05D014361 5.4e-18 94.7 61 82.0
BolC4t21752H Brassica oleracea HOM05D001176 ORTHO05D014361 5.4e-18 94.7 61 82.0
Mapoly0245s0001 Marchantia polymorpha HOM05D001176 ORTHO05D008595 5.4e-18 94.7 147 42.2
HPP92_004191 Vanilla planifolia HOM05D001176 ORTHO05D008595 1.2e-17 93.6 137 42.3
EL10Ac6g15342 Beta vulgaris HOM05D001176 ORTHO05D008595 3.9e-16 88.6 86 61.6
unitig_899.g15286 Utricularia gibba HOM05D001176 ORTHO05D008595 3.9e-16 88.6 136 41.2
TAR626G0594 Trochodendron aralioides HOM05D001176 ORTHO05D008595 5.0e-16 88.2 70 64.3
PSO541G0961 Papaver somniferum HOM05D001176 ORTHO05D008595 6.6e-16 87.8 144 43.8
TAR625G0767 Trochodendron aralioides HOM05D003927 ORTHO05D004905 1.1e-15 87.0 60 71.7
SMO119G0427 Selaginella moellendorffii HOM05D001176 ORTHO05D008595 2.8e-14 82.4 115 42.6
Sabra06G0005000 Salix brachista HOM05D001176 ORTHO05D008595 4.7e-14 81.6 83 57.8
Oeu012378.4 Olea europaea HOM05D001176 ORTHO05D008595 1.1e-13 80.5 197 35.0
Os02g0173100 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D014361 5.2e-13 78.2 62 64.5
BcaC02g12235 Brassica carinata HOM05D001176 ORTHO05D014361 1.5e-12 76.6 63 68.3
MELO3C016233.2 Cucumis melo HOM05D001176 ORTHO05D008595 5.4e-10 68.2 90 44.4
CDE06G1242 Ceratophyllum demersum HOM05D001176 ORTHO05D008595 3.0e-08 62.4 95 41.1
Lsat_1_v5_gn_6_23680 Lactuca sativa HOM05D001176 ORTHO05D014361 1.5e-07 60.1 90 38.9
MELO3C034744.2 Cucumis melo HOM05D000064 ORTHO05D010180 8.1e-06 54.3 42 64.3


User provided reference genes

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