Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 0.0e+00 1377.5 710 100.0
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 0.0e+00 1373.2 710 99.4
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 0.0e+00 1366.3 710 99.0
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 0.0e+00 1366.3 710 99.0
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 0.0e+00 1364.7 710 98.9
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 0.0e+00 1300.0 711 94.8
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 0.0e+00 1253.0 702 90.9
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 0.0e+00 1248.8 702 90.6
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 0.0e+00 1248.0 702 90.6
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 0.0e+00 1247.6 702 90.5
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 0.0e+00 1247.3 701 90.6
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 0.0e+00 1246.5 703 90.6
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 0.0e+00 1246.5 706 90.1
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 0.0e+00 1245.7 702 90.5
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 0.0e+00 1224.5 703 88.2
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 0.0e+00 1224.5 702 88.5
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 0.0e+00 1224.2 703 88.5
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 0.0e+00 1198.0 701 87.4
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 0.0e+00 1182.9 704 85.9
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 0.0e+00 1120.1 711 78.2
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 0.0e+00 1110.5 708 78.5
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 0.0e+00 1109.4 708 78.4
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 0.0e+00 1109.0 701 79.5
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1109.0 706 79.2
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 0.0e+00 1108.2 701 80.0
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 0.0e+00 1106.7 706 78.0
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 0.0e+00 1105.9 701 78.7
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 0.0e+00 1105.5 698 79.8
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 0.0e+00 1105.5 702 78.8
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 0.0e+00 1104.4 702 78.8
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 0.0e+00 1104.0 699 78.4
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 0.0e+00 1103.6 700 79.0
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 0.0e+00 1103.6 705 78.4
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 0.0e+00 1103.6 701 79.0
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 0.0e+00 1103.2 710 77.5
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1102.4 701 79.9
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 0.0e+00 1102.0 702 78.5
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 0.0e+00 1101.7 698 79.7
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 0.0e+00 1100.9 707 77.8
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 0.0e+00 1100.1 704 78.1
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 0.0e+00 1100.1 704 78.0
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 0.0e+00 1098.6 701 78.0
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 0.0e+00 1098.2 715 78.2
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 0.0e+00 1095.9 701 78.3
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 0.0e+00 1095.9 704 78.0
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 0.0e+00 1093.6 700 78.9
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 0.0e+00 1093.6 705 77.6
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 0.0e+00 1093.2 700 78.1
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 0.0e+00 1092.8 701 77.6
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 0.0e+00 1092.4 702 77.4
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 0.0e+00 1091.6 704 77.6
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 0.0e+00 1091.3 700 78.4
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 0.0e+00 1087.0 701 77.2
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 0.0e+00 1087.0 697 78.2
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 0.0e+00 1085.9 706 76.9
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1084.3 701 77.7
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 0.0e+00 1083.9 713 76.2
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 0.0e+00 1083.9 701 78.3
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 0.0e+00 1083.2 700 78.0
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 0.0e+00 1082.0 700 77.4
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 0.0e+00 1080.9 700 77.0
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 0.0e+00 1080.9 702 78.1
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 0.0e+00 1080.1 701 78.0
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 0.0e+00 1079.7 700 78.1
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 4.9e-312 1074.7 698 77.2
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 1.5e-311 1072.4 700 76.4
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.4e-311 1071.6 698 78.1
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 9.7e-311 1069.7 728 74.5
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 1.7e-310 1068.9 700 76.1
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 1.7e-310 1068.9 700 76.4
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 3.7e-310 1067.8 693 77.5
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 8.5e-307 1056.6 701 75.2
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 1.9e-306 1055.4 705 75.6
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 1.9e-306 1055.4 705 75.6
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 5.5e-306 1053.9 703 75.4
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 2.7e-305 1051.6 701 73.9
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 2.7e-305 1051.6 695 75.5
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.0e-304 1049.7 698 75.5
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 3.3e-303 1044.6 713 75.5
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 1.1e-301 1039.6 701 75.5
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.4e-300 1034.6 698 76.2
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 1.0e-299 1033.1 687 77.0
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 1.1e-298 1029.6 704 75.7
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 1.6e-297 1025.8 706 75.4
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 5.1e-296 1020.8 689 74.9
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 2.0e-295 1018.8 699 74.8
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 1.7e-294 1015.8 681 75.9
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 1.7e-291 1005.7 698 73.5
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 5.0e-291 1004.2 705 72.1
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.1e-289 998.8 722 72.7
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.7e-289 998.4 727 71.7
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 1.1e-287 993.0 660 76.7
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 9.7e-287 989.9 614 81.4
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 1.4e-285 986.1 659 75.4
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 5.9e-284 980.7 671 75.7
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 1.0e-283 979.9 703 70.7
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 1.3e-283 979.5 696 71.0
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 1.7e-283 979.2 618 79.8
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 9.4e-282 973.4 701 70.5
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.2e-279 966.5 694 72.8
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 4.5e-276 954.5 702 71.2
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 6.3e-270 934.1 651 71.9
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.3e-267 926.4 588 80.4
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 3.3e-266 921.8 700 68.7
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 8.6e-259 897.1 699 66.1
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 6.2e-257 891.0 545 82.2
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.6e-255 885.6 570 79.3
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.6e-252 876.3 725 65.1
CDE01G0684 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 2.1e-244 849.4 701 63.8
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 3.4e-239 832.0 701 64.3
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 1.0e-235 820.5 724 63.0
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.3e-226 788.5 572 69.6
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.3e-226 788.5 533 75.8
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 4.9e-222 775.0 526 74.3
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 7.6e-215 751.1 449 85.1
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 3.5e-204 715.7 687 53.1
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 4.8e-201 705.3 630 57.5
COL.COLO4_37234 Corchorus olitorius HOM05D004914 ORTHO05D006512 1.7e-190 670.2 612 60.0
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.8e-184 650.2 549 65.2
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 3.8e-182 642.5 401 80.5
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.2e-180 637.5 391 81.6
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.8e-171 607.1 623 49.6
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 5.0e-166 589.0 645 47.1
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 2.2e-161 573.5 646 47.5
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 9.1e-160 568.2 521 59.9
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 3.7e-145 519.6 392 71.2
AagrBONN_evm.TU.Sc2ySwM_117.1801 Anthoceros agrestis HOM05D004914 ORTHO05D006512 7.3e-141 505.4 634 43.2
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.1e-139 501.5 638 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1769 Anthoceros agrestis HOM05D004914 ORTHO05D006512 7.0e-136 488.8 647 42.0
AagrBONN_evm.TU.Sc2ySwM_228.2050 Anthoceros agrestis HOM05D004914 ORTHO05D006512 4.4e-130 469.5 627 43.2
SEGI_18257 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 3.0e-118 430.3 307 68.7
Oeu046798.1 Olea europaea HOM05D004914 ORTHO05D006512 4.7e-116 422.9 709 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 3.4e-106 390.2 406 52.0
Mapoly0339s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 8.7e-102 375.6 244 78.3
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.3e-94 350.9 399 52.1
PGSC0003DMG402007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 1.8e-78 298.1 223 61.4
SEGI_16876 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.8e-67 261.5 223 63.7
FAN18G1875 Fragaria x ananassa HOM05D004914 ORTHO05D006512 4.0e-54 217.2 125 82.4
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.8e-51 208.4 171 67.3
Mapoly1910s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 4.9e-36 157.1 133 53.4
CSS0011428 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.9e-28 131.3 78 82.1
arahy.Tifrunner.gnm1.ann1.N8W4DB Arachis hypogaea HOM05D004914 ORTHO05D000389 3.9e-25 120.9 63 85.7
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 3.3e-24 117.9 101 58.4
arahy.Tifrunner.gnm1.ann1.3D8EL1 Arachis hypogaea HOM05D004914 ORTHO05D000389 2.1e-23 115.2 59 88.1
CBR_g12519 Chara braunii HOM05D004914 ORTHO05D006512 3.2e-19 101.3 92 55.4
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 2.0e-13 82.0 56 67.9
CSS0022246 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112219 9.2e-11 73.2 54 61.1
CSS0001366 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112087 5.6e-08 63.9 55 52.7
CSS0009431 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D113607 5.6e-08 63.9 55 52.7
arahy.Tifrunner.gnm1.ann1.D5QS8R Arachis hypogaea HOM05D000487 ORTHO05D000389 8.1e-07 60.1 30 80.0
CSS0040812 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D111646 2.4e-06 58.5 51 52.9


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