Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 3.2e-124 448.4 212 100.0
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.5e-110 402.9 262 77.1
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 2.0e-102 375.9 211 87.2
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 2.3e-98 362.5 262 70.6
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 3.3e-97 358.6 262 71.0
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 4.4e-94 348.2 262 68.7
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.6e-91 339.7 262 67.9
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-90 336.7 262 67.6
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 8.1e-88 327.4 262 66.4
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 2.4e-87 325.9 262 66.4
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 5.3e-87 324.7 262 65.6
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 3.4e-86 322.0 241 69.7
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 4.3e-81 305.1 236 67.8
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 4.3e-81 305.1 263 63.1
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 7.3e-81 304.3 212 70.3
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 9.6e-81 303.9 212 70.3
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-80 302.0 222 72.1
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-78 297.0 264 59.1
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 4.9e-77 291.6 259 57.9
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 8.4e-77 290.8 246 58.9
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-74 283.5 245 61.6
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 5.1e-74 281.6 262 59.9
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 5.1e-74 281.6 262 59.9
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 4.3e-73 278.5 267 57.3
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-72 275.8 267 56.9
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 4.8e-72 275.0 264 53.8
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 6.2e-72 274.6 264 54.2
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-71 273.1 265 53.2
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-71 272.3 264 54.2
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-71 272.3 267 55.8
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-71 272.3 253 55.3
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-66 256.9 262 53.8
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 5.1e-66 255.0 263 52.9
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-66 254.6 262 50.4
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-66 254.2 262 53.8
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 1.1e-65 253.8 263 52.5
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 9.6e-65 250.8 194 68.0
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-62 243.8 242 52.9
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-62 242.7 264 49.6
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 5.8e-62 241.5 263 52.5
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-61 240.0 264 48.9
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 8.4e-61 237.7 258 53.1
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 1.4e-60 236.9 263 51.7
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-60 236.5 262 48.5
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 1.1e-57 227.3 122 89.3
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.9e-57 226.5 261 50.2
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 1.1e-55 220.7 132 81.8
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 2.4e-55 219.5 207 57.0
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 2.6e-54 216.1 134 79.9
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 4.5e-54 215.3 199 58.3
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 5.9e-54 214.9 209 57.9
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 1.0e-53 214.2 134 79.9
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-53 213.4 214 52.8
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.7e-53 213.4 199 56.3
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 1.1e-52 210.7 132 78.0
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 3.2e-52 209.1 132 78.0
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 4.2e-52 208.8 221 52.9
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 7.2e-52 208.0 203 54.7
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-51 206.8 258 44.2
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 2.1e-51 206.5 227 51.5
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 2.0e-49 199.9 200 55.5
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 3.3e-49 199.1 209 53.1
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 6.9e-47 191.4 141 66.0
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 6.9e-47 191.4 141 66.0
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.2e-46 190.7 187 55.6
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 2.6e-46 189.5 132 68.2
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 2.6e-46 189.5 132 68.2
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 9.4e-44 181.0 202 50.0
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 8.8e-42 174.5 222 46.8
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 4.4e-41 172.2 203 49.3
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 5.7e-41 171.8 136 66.9
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 5.7e-41 171.8 114 71.9
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 7.4e-41 171.4 207 47.8
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 4.8e-40 168.7 207 46.9
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 5.9e-38 161.8 148 59.5
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 7.7e-38 161.4 190 47.9
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 1.0e-37 161.0 107 73.8
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 1.0e-37 161.0 107 73.8
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-36 157.1 120 65.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 3.2e-36 156.0 132 59.1
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 3.6e-35 152.5 114 64.9
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 6.1e-35 151.8 101 75.2
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-34 149.4 213 40.8
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 1.5e-33 147.1 112 66.1
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 1.5e-33 147.1 213 42.3
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 1.5e-33 147.1 112 66.1
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 1.7e-32 143.7 151 53.0
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 1.8e-31 140.2 160 46.2
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 2.4e-31 139.8 177 44.1
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.6e-30 137.1 157 46.5
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 2.0e-30 136.7 160 45.0
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 2.0e-30 136.7 158 46.2
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 1.0e-29 134.4 138 52.2
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 1.3e-29 134.0 157 45.2
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 2.2e-29 133.3 145 51.0
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 2.2e-29 133.3 157 45.2
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 2.9e-29 132.9 75 86.7
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 5.0e-29 132.1 157 45.2
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 8.5e-29 131.3 139 54.0
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 1.1e-28 131.0 77 81.8
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 2.5e-28 129.8 91 70.3
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 3.2e-28 129.4 211 41.2
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-27 125.9 141 46.8
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 4.7e-27 125.6 134 53.7
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 8.0e-27 124.8 157 43.3
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 8.0e-27 124.8 211 40.3
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 2.3e-26 123.2 114 57.9
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 2.6e-25 119.8 142 49.3
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 7.5e-25 118.2 77 67.5
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-24 117.5 77 66.2
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 1.3e-24 117.5 77 67.5
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 1.7e-24 117.1 102 56.9
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 2.2e-24 116.7 78 71.8
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 2.8e-24 116.3 92 64.1
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 3.7e-24 115.9 77 66.2
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-23 114.4 77 66.2
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 1.4e-23 114.0 144 45.1
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 3.1e-23 112.8 77 64.9
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 5.4e-23 112.1 132 49.2
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 7.0e-23 111.7 211 36.5
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 1.2e-22 110.9 135 45.2
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 1.6e-22 110.5 77 64.9
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 1.0e-21 107.8 77 62.3
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.3e-21 107.5 73 72.6
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 2.2e-21 106.7 68 73.5
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 8.5e-21 104.8 56 89.3
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 1.1e-20 104.4 89 60.7
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 1.9e-20 103.6 134 44.8
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 3.2e-20 102.8 234 34.2
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 4.2e-20 102.4 75 66.7
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.2e-19 100.9 60 81.7
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 1.8e-18 97.1 60 81.7
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 3.0e-18 96.3 62 75.8
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.2e-17 94.4 60 76.7
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 1.2e-17 94.4 179 36.9
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 1.2e-17 94.4 179 36.9
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 3.4e-17 92.8 109 49.5
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 3.4e-17 92.8 109 49.5
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 5.7e-17 92.0 62 66.1
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 7.0e-15 85.1 60 70.0
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 7.0e-15 85.1 60 70.0
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 1.2e-14 84.3 75 52.0
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 1.0e-13 81.3 136 37.5
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 1.0e-13 81.3 136 37.5
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 1.9e-12 77.0 179 33.5
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 1.2e-11 74.3 118 38.1
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 3.0e-10 69.7 62 58.1
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 4.4e-09 65.9 39 74.4
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 6.4e-08 62.0 45 64.4
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 6.4e-08 62.0 36 72.2
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 2.4e-07 60.1 56 58.9
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 5.9e-06 55.5 35 77.1
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 7.8e-06 55.1 83 38.6


User provided reference genes

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