Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p28830 Brassica napus HOM05D013220 ORTHO05D018789 4.2e-56 221.1 108 100.0
C09p51200 Brassica napus HOM05D013220 ORTHO05D018789 2.5e-29 132.1 104 69.2
BolC8t48355H Brassica oleracea HOM05D013220 ORTHO05D018789 4.1e-27 124.8 105 66.7
BolC9t57983H Brassica oleracea HOM05D013220 ORTHO05D018789 5.3e-27 124.4 104 67.3
BolC8t47936H Brassica oleracea HOM05D013220 ORTHO05D018789 1.5e-26 122.9 104 66.3
A02p14600 Brassica napus HOM05D013220 ORTHO05D018789 7.9e-23 110.5 75 81.3
BraA02t07917Z Brassica rapa HOM05D013220 ORTHO05D018651 6.9e-19 97.4 43 97.7
BraA07t28268Z Brassica rapa HOM05D013220 ORTHO05D018789 6.5e-17 90.9 50 94.0
BcaC07g39110 Brassica carinata HOM05D013220 ORTHO05D018651 1.4e-14 83.2 41 92.7
A08p09130 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-10 70.1 47 68.1
BraA02t07916Z Brassica rapa HOM05D013220 ORTHO05D018789 1.6e-10 69.7 36 100.0
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-09 66.6 44 65.9
C03p08420 Brassica napus HOM05D031095 ORTHO05D018651 1.3e-09 66.6 40 70.0
BolC3t13347H Brassica oleracea HOM05D031095 ORTHO05D018651 1.3e-09 66.6 40 70.0
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-08 63.2 44 63.6
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-08 63.2 44 63.6
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-08 63.2 44 63.6
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 62.8 44 63.6
C02p49510 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 62.8 45 62.2
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-08 62.4 45 60.0
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 4.2e-08 61.6 44 61.4
BcaNung02333 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.1 39 66.7
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-07 58.5 44 54.5
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-07 58.5 44 54.5
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-07 58.5 44 54.5
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-07 58.2 45 53.3
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-07 57.8 39 64.1
BcaB06g28304 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-07 57.4 39 66.7
BcaB05g22169 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.0 40 57.5
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.0 44 52.3
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.0 39 64.1
BcaC09g52269 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.0 43 60.5
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-06 57.0 39 64.1
C09p39230 Brassica napus HOM05D000313 ORTHO05D013518 1.0e-06 57.0 47 53.2
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-06 57.0 39 61.5
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-06 57.0 44 52.3
BolC9t56801H Brassica oleracea HOM05D000313 ORTHO05D013518 1.0e-06 57.0 47 53.2
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-06 56.6 39 64.1
A05p08730 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 56.6 39 64.1
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 56.6 39 64.1
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 56.6 39 64.1
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-06 56.6 39 64.1
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-06 56.6 44 52.3
BcaC01g03018 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-06 56.2 41 58.5
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-06 56.2 40 62.5
C03p57090 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-06 56.2 41 58.5
BolC3t17987H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-06 56.2 41 58.5
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 55.8 47 57.4
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 61.5
C05p25090 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 61.5
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 61.5
C08p08670 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 55.5 44 59.1
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 61.5
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 3.0e-06 55.5 39 61.5
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-06 55.1 39 64.1
BcaC02g09566 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-06 55.1 81 39.5
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-06 55.1 39 64.1
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-06 55.1 39 61.5
BraA01t04093Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-06 55.1 39 61.5
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-06 54.7 39 61.5
BcaC05g27414 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-06 54.7 40 62.5
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-06 54.7 39 61.5
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-06 54.7 39 61.5
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-06 54.7 39 59.0
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 5.2e-06 54.7 39 61.5
BcaB02g10926 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-06 54.3 39 59.0
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-06 54.3 44 56.8
A05p14790 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-06 54.3 47 51.1
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-06 54.3 40 62.5
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-06 54.3 40 62.5
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-06 54.3 44 56.8
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 8.8e-06 53.9 39 59.0
A05p12980 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-06 53.9 47 51.1
C09p41840 Brassica napus HOM05D000313 ORTHO05D000065 8.8e-06 53.9 58 46.6
BolC9t57071H Brassica oleracea HOM05D000313 ORTHO05D000065 8.8e-06 53.9 58 46.6
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 8.8e-06 53.9 44 47.7


User provided reference genes

Program Settings