Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p28340 Brassica napus HOM05D008952 ORTHO05D021944 2.1e-50 203.4 254 100.0
BraA02t07870Z Brassica rapa HOM05D008952 ORTHO05D021944 5.2e-49 198.7 254 99.2
BolC2t10527H Brassica oleracea HOM05D008952 ORTHO05D021944 2.7e-37 159.8 294 82.3
C02p44920 Brassica napus HOM05D008952 ORTHO05D021944 3.3e-35 152.9 294 73.8
BcaB07g30533 Brassica carinata HOM05D008952 ORTHO05D011481 1.5e-32 144.1 277 82.3
BcaC03g16650 Brassica carinata HOM05D008952 ORTHO05D021944 2.8e-26 123.2 252 37.7
Sp2g09140 Schrenkiella parvula HOM05D008952 ORTHO05D011481 4.4e-24 115.9 293 73.0
BraA09t37703Z Brassica rapa HOM05D008952 ORTHO05D011481 4.9e-23 112.5 77 77.9
BcaC04g21842 Brassica carinata HOM05D008952 ORTHO05D011481 8.4e-23 111.7 77 79.2
A09p21040 Brassica napus HOM05D008952 ORTHO05D011481 1.4e-22 110.9 77 77.9
BcaB07g30953 Brassica carinata HOM05D008952 ORTHO05D011481 2.7e-21 106.7 73 78.1
C09p26780 Brassica napus HOM05D008952 ORTHO05D011481 3.5e-21 106.3 77 74.0
BolC9t55566H Brassica oleracea HOM05D008952 ORTHO05D011481 3.5e-21 106.3 77 74.0
Thhalv10003385m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 3.5e-21 106.3 74 75.7
AL8G15670 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 3.0e-20 103.2 76 77.6
CARHR178870 Cardamine hirsuta HOM05D008952 ORTHO05D011481 1.3e-18 97.8 74 75.7
AT5G44310 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 2.8e-18 96.7 74 74.3
Carub.0008s0421 Capsella rubella HOM05D008952 ORTHO05D011481 2.0e-16 90.5 71 74.6
Aa31LG9G8860 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.3e-11 72.8 60 70.0
BcaNung04710 Brassica carinata HOM05D008952 ORTHO05D011481 6.9e-09 65.5 78 56.4
AL7G33130 Arabidopsis lyrata HOM05D008952 ORTHO05D011481 9.0e-09 65.1 74 56.8
Carub.0007s2042 Capsella rubella HOM05D008952 ORTHO05D011481 3.4e-08 63.2 74 55.4
A08p15360 Brassica napus HOM05D008952 ORTHO05D011481 5.8e-08 62.4 74 56.8
AT4G21020 Arabidopsis thaliana HOM05D008952 ORTHO05D011481 7.6e-08 62.0 74 54.1
BraA01t01182Z Brassica rapa HOM05D008952 ORTHO05D011481 7.6e-08 62.0 76 55.3
A01p12370 Brassica napus HOM05D008952 ORTHO05D011481 1.7e-07 60.8 76 53.9
BcaB03g11704 Brassica carinata HOM05D008952 ORTHO05D011481 3.8e-07 59.7 74 54.1
C03p83630 Brassica napus HOM05D008952 ORTHO05D011481 4.9e-07 59.3 74 55.4
Thhalv10027342m.g Eutrema salsugineum HOM05D008952 ORTHO05D011481 6.4e-07 58.9 74 52.7
Sp7g19070 Schrenkiella parvula HOM05D008952 ORTHO05D011481 6.4e-07 58.9 74 54.1
Aa31LG6G3060 Aethionema arabicum HOM05D008952 ORTHO05D011481 8.4e-07 58.5 75 53.3
C01p14890 Brassica napus HOM05D008952 ORTHO05D011481 1.4e-06 57.8 76 52.6
BolC1t01436H Brassica oleracea HOM05D008952 ORTHO05D011481 1.4e-06 57.8 76 52.6
THA.LOC104824877 Tarenaya hassleriana HOM05D008952 ORTHO05D011481 1.9e-06 57.4 86 46.5
BcaC01g00723 Brassica carinata HOM05D008952 ORTHO05D011481 2.4e-06 57.0 74 54.1
CARHR227600 Cardamine hirsuta HOM05D008952 ORTHO05D011481 4.2e-06 56.2 74 52.7
BcaC09g51279 Brassica carinata HOM05D008952 ORTHO05D011481 5.5e-06 55.8 74 52.7


User provided reference genes

Program Settings