Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p27950 Brassica napus HOM05D000675 ORTHO05D013243 4.8e-45 184.1 91 100.0
A01p35410 Brassica napus HOM05D000675 ORTHO05D013243 1.5e-43 179.1 91 97.8
A06p28200 Brassica napus HOM05D000675 ORTHO05D013243 1.5e-43 179.1 91 97.8
BcaC02g11419 Brassica carinata HOM05D000675 ORTHO05D013243 2.3e-15 85.5 54 77.8
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 2.2e-13 79.0 61 63.9
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-13 78.6 65 61.5
BolC8t48443H Brassica oleracea HOM05D000675 ORTHO05D013243 2.4e-12 75.5 65 61.5
A07p36210 Brassica napus HOM05D000675 ORTHO05D013243 3.1e-12 75.1 59 66.1
BcaC07g38048 Brassica carinata HOM05D000675 ORTHO05D013243 6.9e-12 73.9 65 60.0
BcaC04g21549 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-11 73.2 65 60.0
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-11 71.6 60 63.3
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 3.4e-11 71.6 60 63.3
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 5.9e-11 70.9 57 64.9
A03p64600 Brassica napus HOM05D000675 ORTHO05D013243 7.7e-11 70.5 46 78.3
A08p11640 Brassica napus HOM05D000675 ORTHO05D013243 7.7e-11 70.5 46 78.3
BolC3t14487H Brassica oleracea HOM05D018291 ORTHO05D019888 7.7e-11 70.5 63 58.7
BraA03t15526Z Brassica rapa HOM05D000675 ORTHO05D013243 7.7e-11 70.5 46 78.3
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 1.0e-10 70.1 47 70.2
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-10 70.1 65 61.5
A07p03550 Brassica napus HOM05D000675 ORTHO05D033415 1.3e-10 69.7 49 69.4
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 2.2e-10 68.9 60 60.0
A02p08880 Brassica napus HOM05D000675 ORTHO05D013243 2.2e-10 68.9 60 60.0
A05p17400 Brassica napus HOM05D000675 ORTHO05D019849 2.2e-10 68.9 75 56.0
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 2.2e-10 68.9 62 58.1
BraA02t05957Z Brassica rapa HOM05D000675 ORTHO05D013243 2.2e-10 68.9 60 60.0
BraA07t28421Z Brassica rapa HOM05D000675 ORTHO05D000395 2.9e-10 68.6 46 71.7
BcaC05g26973 Brassica carinata HOM05D000675 ORTHO05D013243 3.8e-10 68.2 59 61.0
A08p06340 Brassica napus HOM05D000675 ORTHO05D000395 5.0e-10 67.8 60 58.3
C06p33690 Brassica napus HOM05D000675 ORTHO05D000395 6.5e-10 67.4 61 57.4
BraA07t28911Z Brassica rapa HOM05D000675 ORTHO05D000395 1.1e-09 66.6 46 73.9
C05p28300 Brassica napus HOM05D000675 ORTHO05D013243 1.9e-09 65.9 65 55.4
BolC5t31432H Brassica oleracea HOM05D000675 ORTHO05D019849 1.9e-09 65.9 77 55.8
BraA06t25677Z Brassica rapa HOM05D000675 ORTHO05D019849 3.2e-09 65.1 77 53.2
BraA08t32511Z Brassica rapa HOM05D000675 ORTHO05D041170 3.2e-09 65.1 65 60.0
BcaC05g26837 Brassica carinata HOM05D000675 ORTHO05D019849 4.2e-09 64.7 59 61.0
A08p04840 Brassica napus HOM05D000675 ORTHO05D041170 5.5e-09 64.3 65 58.5
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-08 62.4 60 56.7
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-08 62.0 55 63.6
C08p18220 Brassica napus HOM05D000675 ORTHO05D033415 2.7e-08 62.0 49 65.3
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-08 62.0 55 63.6
BolC8t49457H Brassica oleracea HOM05D000675 ORTHO05D033415 2.7e-08 62.0 49 65.3
BolC9t57807H Brassica oleracea HOM05D000675 ORTHO05D013243 6.7e-07 57.4 46 60.9
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 8.8e-07 57.0 65 47.7
BraA09t41505Z Brassica rapa HOM05D018291 ORTHO05D019888 2.0e-06 55.8 47 59.6
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-06 55.5 70 45.7
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 2.6e-06 55.5 70 45.7
BraA10t42847Z Brassica rapa HOM05D000675 ORTHO05D013243 2.6e-06 55.5 49 55.1
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-06 55.1 40 62.5
BcaC03g15450 Brassica carinata HOM05D018291 ORTHO05D019888 3.3e-06 55.1 76 47.4
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 3.3e-06 55.1 40 62.5
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 3.3e-06 55.1 40 62.5
C06p35350 Brassica napus HOM05D000675 ORTHO05D019849 4.4e-06 54.7 67 55.2
BcaC05g25771 Brassica carinata HOM05D000675 ORTHO05D021848 5.7e-06 54.3 65 46.2
A06p35690 Brassica napus HOM05D000675 ORTHO05D033165 5.7e-06 54.3 44 59.1
A10p17730 Brassica napus HOM05D000675 ORTHO05D033165 5.7e-06 54.3 44 59.1
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 5.7e-06 54.3 65 46.2
A10p08730 Brassica napus HOM05D000675 ORTHO05D019849 7.4e-06 53.9 88 46.6
BraA05t20960Z Brassica rapa HOM05D000675 ORTHO05D033165 9.7e-06 53.5 49 55.1


User provided reference genes

Program Settings