Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 3.8e-43 178.3 133 100.0
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 3.8e-43 178.3 133 100.0
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 7.2e-42 174.1 133 98.5
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 7.2e-42 174.1 133 98.5
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.6e-41 172.9 133 93.2
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 6.1e-41 171.0 133 90.2
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 8.0e-41 170.6 131 90.8
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 3.9e-40 168.3 131 88.5
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 4.5e-36 154.8 129 82.2
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 8.5e-35 150.6 129 93.0
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 1.1e-34 150.2 129 85.3
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 3.0e-32 142.1 131 74.0
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 2.6e-31 139.0 129 79.8
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 7.5e-31 137.5 127 84.3
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 6.8e-24 114.4 132 65.2
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 4.4e-23 111.7 135 60.0
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.8e-22 108.2 129 64.3
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 1.8e-21 106.3 129 68.2
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 1.8e-21 106.3 129 63.6
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 4.1e-21 105.1 130 65.4
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 5.4e-21 104.8 139 59.0
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 9.1e-21 104.0 139 64.0
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 1.6e-20 103.2 129 67.4
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 2.0e-20 102.8 131 69.5
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 2.0e-20 102.8 131 69.5
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 2.7e-20 102.4 133 69.9
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 4.5e-20 101.7 130 67.7
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 7.7e-20 100.9 131 61.1
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.0e-19 100.5 136 66.9
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.0e-19 100.5 130 56.2
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.3e-19 100.1 129 62.8
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 1.3e-19 100.1 119 69.7
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 1.3e-19 100.1 131 67.9
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 1.3e-19 100.1 131 58.0
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.3e-19 99.4 138 62.3
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.3e-19 99.4 131 57.3
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 2.3e-19 99.4 133 60.9
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 3.8e-19 98.6 131 59.5
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 3.8e-19 98.6 133 61.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 6.6e-19 97.8 133 59.4
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 6.6e-19 97.8 139 66.9
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.1e-18 97.1 128 63.3
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 1.5e-18 96.7 127 61.4
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 1.5e-18 96.7 130 61.5
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 1.9e-18 96.3 131 63.4
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 3.3e-18 95.5 127 65.4
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 5.5e-18 94.7 143 51.0
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 7.2e-18 94.4 134 62.7
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 1.6e-17 93.2 129 58.9
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.6e-17 93.2 128 68.8
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 2.1e-17 92.8 133 62.4
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 2.8e-17 92.4 139 59.7
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 4.7e-17 91.7 140 57.9
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 6.1e-17 91.3 130 69.2
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.0e-16 90.5 130 67.7
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.0e-16 90.5 143 54.5
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 1.0e-16 90.5 129 58.1
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.4e-16 90.1 129 66.7
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 1.4e-16 90.1 140 57.1
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 3.0e-16 89.0 139 65.5
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 4.0e-16 88.6 130 55.4
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 5.2e-16 88.2 134 64.2
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 6.8e-16 87.8 130 63.8
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 6.8e-16 87.8 130 63.8
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 6.8e-16 87.8 137 53.3
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 8.9e-16 87.4 138 55.8
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 8.9e-16 87.4 137 61.3
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 1.5e-15 86.7 128 68.0
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 2.0e-15 86.3 127 64.6
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 3.4e-15 85.5 130 66.9
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 7.5e-15 84.3 145 53.8
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 7.5e-15 84.3 145 53.8
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.3e-14 83.6 136 66.2
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 8.3e-14 80.9 136 63.2
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 1.1e-13 80.5 132 62.9
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 1.8e-13 79.7 129 56.6
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 3.2e-13 79.0 131 65.6
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 2.7e-12 75.9 134 63.4
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 5.9e-12 74.7 129 64.3
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.0e-11 73.9 161 53.4
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 5.0e-11 71.6 130 61.5
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 6.6e-11 71.2 123 50.4
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 8.6e-11 70.9 91 71.4
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 2.5e-10 69.3 99 67.7
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 5.6e-10 68.2 101 70.3
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 2.1e-09 66.2 117 53.0
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 1.8e-08 63.2 89 71.9
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 6.8e-08 61.2 156 44.9
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 4.4e-07 58.5 87 73.6
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 5.8e-07 58.2 84 56.0
Thecc.08G167500 Theobroma cacao HOM05D007581 ORTHO05D009250 2.9e-06 55.8 62 71.0
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 3.7e-06 55.5 93 57.0
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 4.9e-06 55.1 122 30.3


User provided reference genes

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