Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p25760 Brassica napus HOM05D001332 ORTHO05D001894 6.8e-74 280.8 165 100.0
BolC2t10117H Brassica oleracea HOM05D001332 ORTHO05D001894 3.3e-28 129.0 71 93.0
C02p41080 Brassica napus HOM05D001332 ORTHO05D001894 2.1e-27 126.3 71 91.5
BcaC05g24455 Brassica carinata HOM05D001332 ORTHO05D001894 8.7e-13 77.8 54 74.1
C05p02480 Brassica napus HOM05D001332 ORTHO05D001894 8.7e-13 77.8 54 74.1
BolC5t29027H Brassica oleracea HOM05D001332 ORTHO05D001894 8.7e-13 77.8 54 74.1
Carub.0001s0348 Capsella rubella HOM05D001332 ORTHO05D001894 1.5e-12 77.0 54 74.1
Sp1g03100 Schrenkiella parvula HOM05D001332 ORTHO05D001894 1.5e-12 77.0 54 74.1
Thhalv10008953m.g Eutrema salsugineum HOM05D001332 ORTHO05D001894 1.9e-12 76.6 54 72.2
AL1G13890 Arabidopsis lyrata HOM05D001332 ORTHO05D001894 3.3e-12 75.9 54 74.1
BcaC07g36921 Brassica carinata HOM05D001332 ORTHO05D001894 3.3e-12 75.9 54 70.4
Atru.chr3.1473 Acer truncatum HOM05D001332 ORTHO05D001894 1.3e-11 73.9 76 51.3
A10p02690 Brassica napus HOM05D001332 ORTHO05D001894 1.3e-11 73.9 54 70.4
BraA10t42538Z Brassica rapa HOM05D001332 ORTHO05D001894 1.3e-11 73.9 54 70.4
CARHR003620 Cardamine hirsuta HOM05D001332 ORTHO05D001894 2.8e-11 72.8 54 70.4
AT1G04290 Arabidopsis thaliana HOM05D001332 ORTHO05D001894 4.8e-11 72.0 54 70.4
Eucgr.I00015 Eucalyptus grandis HOM05D001332 ORTHO05D001894 4.8e-11 72.0 70 55.7
THA.LOC104819478 Tarenaya hassleriana HOM05D001332 ORTHO05D001894 4.8e-11 72.0 71 53.5
Aa31LG1G20550 Aethionema arabicum HOM05D000923 ORTHO05D000720 6.2e-11 71.6 71 53.5
PSO210G2973 Papaver somniferum HOM05D001332 ORTHO05D001894 1.1e-10 70.9 76 50.0
PSO210G4437 Papaver somniferum HOM05D001332 ORTHO05D001894 1.1e-10 70.9 76 50.0
vmacro17790 Vaccinium macrocarpon HOM05D001332 ORTHO05D001894 1.1e-10 70.9 73 53.4
Duzib147G0745 Durio zibethinus HOM05D001332 ORTHO05D001894 1.4e-10 70.5 54 64.8
Gohir.A11G058700 Gossypium hirsutum HOM05D001332 ORTHO05D001894 1.4e-10 70.5 71 52.1
TWI31G0340 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 1.4e-10 70.5 76 50.0
Prupe.4G104800 Prunus persica HOM05D001332 ORTHO05D001894 1.8e-10 70.1 80 50.0
Nitab4.5_0006242g0010 Nicotiana tabacum HOM05D001332 ORTHO05D001894 3.1e-10 69.3 70 51.4
Rhsim08G0128700 Rhododendron simsii HOM05D001332 ORTHO05D001894 3.1e-10 69.3 66 51.5
Dinv04535 Davidia involucrata HOM05D001332 ORTHO05D001894 4.0e-10 68.9 71 50.7
QL10p037230 Quercus lobata HOM05D001332 ORTHO05D001894 4.0e-10 68.9 53 64.2
QL10p038097 Quercus lobata HOM05D001332 ORTHO05D001894 4.0e-10 68.9 53 64.2
SEGI_17469 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 4.0e-10 68.9 58 62.1
Actinidia36584 Actinidia chinensis HOM05D001332 ORTHO05D001894 5.3e-10 68.6 65 55.4
CDE04G1088 Ceratophyllum demersum HOM05D001332 ORTHO05D001894 5.3e-10 68.6 54 64.8
Ciclev10026677m.g Citrus clementina HOM05D001332 ORTHO05D001894 5.3e-10 68.6 55 63.6
CANSAT54G1716 Cannabis sativa HOM05D001332 ORTHO05D001894 6.9e-10 68.2 54 59.3
CiPaw.16G119200 Carya illinoinensis HOM05D001332 ORTHO05D001894 6.9e-10 68.2 53 62.3
Peaxi162Scf00525g00618 Petunia axillaris HOM05D001332 ORTHO05D001894 6.9e-10 68.2 70 51.4
TAR628G0149 Trochodendron aralioides HOM05D001332 ORTHO05D001894 6.9e-10 68.2 53 64.2
CSS0000159 Camellia sinensis var. sinensis HOM05D001332 ORTHO05D001894 9.0e-10 67.8 49 65.3
Haze_19350 Corylus avellana HOM05D001332 ORTHO05D001894 9.0e-10 67.8 54 61.1
Lj4A820T48 Lonicera japonica HOM05D001332 ORTHO05D001894 9.0e-10 67.8 55 60.0
Manes.13G153200 Manihot esculenta HOM05D001332 ORTHO05D001894 9.0e-10 67.8 54 63.0
Potri.004G134066 Populus trichocarpa HOM05D001332 ORTHO05D001894 9.0e-10 67.8 53 64.2
Prupe.4G105000 Prunus persica HOM05D001332 ORTHO05D001894 9.0e-10 67.8 76 48.7
PGSC0003DMG400023081 Solanum tuberosum HOM05D001332 ORTHO05D001894 9.0e-10 67.8 49 67.3
Gorai.007G067900 Gossypium raimondii HOM05D001332 ORTHO05D001894 1.2e-09 67.4 71 49.3
Solyc09g005390.3 Solanum lycopersicum HOM05D001332 ORTHO05D001894 1.2e-09 67.4 49 65.3
unitig_899.g14978 Utricularia gibba HOM05D000916 ORTHO05D008340 1.2e-09 67.4 49 67.3
PGR119G0336 Punica granatum HOM05D001332 ORTHO05D001894 1.5e-09 67.0 54 63.0
Nitab4.5_0000905g0100 Nicotiana tabacum HOM05D001332 ORTHO05D001894 2.0e-09 66.6 70 50.0
SEGI_33501 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 2.0e-09 66.6 71 53.5
Aqoxy6G00133 Aquilegia oxysepala HOM05D001332 ORTHO05D001894 2.6e-09 66.2 76 44.7
Cpa.g.sc138.30 Carica papaya HOM05D001332 ORTHO05D001894 2.6e-09 66.2 76 47.4
FvH4_3g11670 Fragaria vesca HOM05D001332 ORTHO05D001894 2.6e-09 66.2 55 60.0
Gohir.D11G062900 Gossypium hirsutum HOM05D001332 ORTHO05D001894 2.6e-09 66.2 71 49.3
Thecc.01G147500 Theobroma cacao HOM05D001332 ORTHO05D001894 2.6e-09 66.2 54 57.4
Aa31LG2G2660 Aethionema arabicum HOM05D001332 ORTHO05D001894 3.4e-09 65.9 71 45.1
Duzib264G0962 Durio zibethinus HOM05D001332 ORTHO05D001894 3.4e-09 65.9 54 61.1
MD05G1260500 Malus domestica HOM05D001332 ORTHO05D001894 3.4e-09 65.9 55 60.0
FAN16G1064 Fragaria x ananassa HOM05D001332 ORTHO05D001894 4.5e-09 65.5 55 60.0
Sabra04G0084100 Salix brachista HOM05D001332 ORTHO05D001894 4.5e-09 65.5 56 60.7
Sopen09g001340 Solanum pennellii HOM05D001332 ORTHO05D001894 4.5e-09 65.5 49 63.3
Hma1.2p1_0296F.1_g116940 Hydrangea macrophylla HOM05D001332 ORTHO05D001894 5.8e-09 65.1 72 48.6
Prupe.5G159500 Prunus persica HOM05D001332 ORTHO05D001894 5.8e-09 65.1 65 53.8
Cc00_g04340 Coffea canephora HOM05D001332 ORTHO05D001894 7.6e-09 64.7 49 63.3
CANSAT54G2298 Cannabis sativa HOM05D001332 ORTHO05D001894 1.0e-08 64.3 49 65.3
Nn1g08391 Nelumbo nucifera HOM05D001332 ORTHO05D001894 1.0e-08 64.3 44 70.5
TWI31G0984 Tripterygium wilfordii HOM05D001332 ORTHO05D001894 1.0e-08 64.3 54 63.0
Dinv20721 Davidia involucrata HOM05D001332 ORTHO05D001894 1.3e-08 63.9 55 58.2
GSVIVG01000239001 Vitis vinifera HOM05D001332 ORTHO05D001894 1.3e-08 63.9 53 60.4
CAN.G5.9 Capsicum annuum HOM05D001332 ORTHO05D001894 1.7e-08 63.5 50 64.0
Migut.H02538 Erythranthe guttata HOM05D001332 ORTHO05D001894 1.7e-08 63.5 65 50.8
SalBow8G0886 Salvia bowleyana HOM05D021639 ORTHO05D001894 1.7e-08 63.5 65 52.3
SalBow8G0934 Salvia bowleyana HOM05D021639 ORTHO05D001894 1.7e-08 63.5 65 52.3
Hund21760 Selenicereus undatus HOM05D001332 ORTHO05D001894 1.7e-08 63.5 71 47.9
MSTRG.23237 Avicennia marina HOM05D001332 ORTHO05D001894 2.2e-08 63.2 65 53.8
MD10G1239800 Malus domestica HOM05D001332 ORTHO05D001894 2.9e-08 62.8 55 54.5
Nn5g27745 Nelumbo nucifera HOM05D001332 ORTHO05D001894 2.9e-08 62.8 53 58.5
PGR102G3087 Punica granatum HOM05D001332 ORTHO05D001894 4.9e-08 62.0 50 62.0
SEGI_37226 Sequoiadendron giganteum HOM05D001332 ORTHO05D001894 4.9e-08 62.0 55 58.2
Lsat_1_v5_gn_2_39360 Lactuca sativa HOM05D001332 ORTHO05D001894 8.4e-08 61.2 56 58.9
Nn5g27744 Nelumbo nucifera HOM05D001332 ORTHO05D001894 8.4e-08 61.2 56 50.0
Thecc.01G147300 Theobroma cacao HOM05D001332 ORTHO05D001894 8.4e-08 61.2 53 54.7
EL10Ac4g09746 Beta vulgaris HOM05D001332 ORTHO05D001894 1.4e-07 60.5 50 60.0
AUR62000623 Chenopodium quinoa HOM05D001332 ORTHO05D001894 1.4e-07 60.5 44 65.9
AUR62006976 Chenopodium quinoa HOM05D001332 ORTHO05D001894 1.4e-07 60.5 44 65.9
AUR62025573 Chenopodium quinoa HOM05D001332 ORTHO05D001894 1.4e-07 60.5 44 63.6
Nitab4.5_0000835g0020 Nicotiana tabacum HOM05D001332 ORTHO05D001894 1.4e-07 60.5 51 58.8
Ah.02g118260 Amaranthus hybridus HOM05D001332 ORTHO05D001894 1.9e-07 60.1 44 68.2
Duzib264G1205 Durio zibethinus HOM05D001332 ORTHO05D001894 1.9e-07 60.1 53 52.8
Sc16g0009830 Simmondsia chinensis HOM05D001332 ORTHO05D001894 1.9e-07 60.1 44 68.2
Haze_07710 Corylus avellana HOM05D000001 ORTHO05D000003 2.5e-07 59.7 46 63.0
Gorai.011G121500 Gossypium raimondii HOM05D001332 ORTHO05D001894 2.5e-07 59.7 47 66.0
Phvul.009G160000 Phaseolus vulgaris HOM05D001332 ORTHO05D001894 2.5e-07 59.7 56 60.7
SGA_v2.0_scaffold51G18838 Striga asiatica HOM05D001332 ORTHO05D001894 2.5e-07 59.7 49 57.1
Gohir.A10G157432 Gossypium hirsutum HOM05D001332 ORTHO05D001894 3.2e-07 59.3 47 63.8
VMungo1309G1682 Vigna mungo HOM05D001332 ORTHO05D001894 3.2e-07 59.3 64 54.7
PSO724G0406 Papaver somniferum HOM05D001332 ORTHO05D001894 4.2e-07 58.9 76 43.4
MELO3C023210.2 Cucumis melo HOM05D001332 ORTHO05D001894 7.1e-07 58.2 54 55.6
HanXRQChr14g0434451 Helianthus annuus HOM05D001332 ORTHO05D001894 7.1e-07 58.2 75 45.3
Sed0019998 Sechium edule HOM05D001332 ORTHO05D001894 9.3e-07 57.8 54 57.4
ClCG02G000220 Citrullus lanatus HOM05D001332 ORTHO05D001894 1.2e-06 57.4 53 54.7
Lj1g0011871 Lotus japonicus HOM05D001332 ORTHO05D001894 1.2e-06 57.4 56 57.1
HPP92_003122 Vanilla planifolia HOM05D001332 ORTHO05D001894 1.2e-06 57.4 73 39.7
Gohir.D10G110250 Gossypium hirsutum HOM05D001332 ORTHO05D001894 2.7e-06 56.2 47 63.8
AUR62025524 Chenopodium quinoa HOM05D001332 ORTHO05D001894 3.5e-06 55.8 44 59.1
BcaC07g36919 Brassica carinata HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 55.4
A08p37010 Brassica napus HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 55.4
C08p01000 Brassica napus HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 55.4
BolC8t46900H Brassica oleracea HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 55.4
BraA08t35601Z Brassica rapa HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 55.4
Lalb_Chr23g0272781 Lupinus albus HOM05D001332 ORTHO05D001894 6.0e-06 55.1 56 51.8
ECA238G3031 Erigeron canadensis HOM05D001332 ORTHO05D001894 7.9e-06 54.7 50 58.0
Gohir.D12G002100 Gossypium hirsutum HOM05D001332 ORTHO05D001894 7.9e-06 54.7 53 47.2
Gorai.008G001500 Gossypium raimondii HOM05D001332 ORTHO05D001894 7.9e-06 54.7 53 47.2


User provided reference genes

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