Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 6.8e-81 304.3 196 100.0
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 1.1e-78 297.0 196 92.9
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 1.1e-78 297.0 196 92.9
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.9e-78 296.2 196 98.0
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.0e-76 290.4 196 96.4
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 8.1e-66 254.2 205 74.1
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.4e-54 216.1 194 66.0
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 7.8e-53 211.1 195 64.6
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 3.9e-52 208.8 189 65.1
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 6.6e-52 208.0 194 63.4
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.9e-51 206.5 189 64.6
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 1.6e-50 203.4 188 63.3
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.1e-49 200.7 194 61.9
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-49 199.9 192 69.3
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 3.1e-49 199.1 192 60.9
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.2e-48 197.2 184 60.9
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.1e-46 190.7 186 58.1
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 1.1e-41 174.1 167 73.7
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 5.8e-40 168.3 190 56.3
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 1.5e-32 143.7 180 44.4
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 4.6e-29 132.1 183 48.6
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 7.9e-29 131.3 171 57.3
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 1.0e-28 131.0 179 41.9
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 1.5e-27 127.1 183 48.6
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 4.3e-27 125.6 185 40.0
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 1.3e-26 124.0 167 44.9
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 1.6e-26 123.6 178 54.5
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 2.1e-26 123.2 164 53.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 2.1e-26 123.2 188 41.5
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.8e-26 122.9 173 47.4
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 2.8e-26 122.9 173 54.9
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 6.2e-26 121.7 170 45.9
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.4e-25 120.6 193 49.7
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.4e-25 120.6 179 48.0
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 2.4e-25 119.8 168 50.6
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 2.4e-25 119.8 187 49.7
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 5.3e-25 118.6 176 40.9
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 5.3e-25 118.6 192 40.6
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 6.9e-25 118.2 186 46.8
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 6.9e-25 118.2 183 46.4
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 9.0e-25 117.9 183 39.9
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.0e-24 116.7 166 46.4
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 2.0e-24 116.7 180 39.4
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 2.0e-24 116.7 169 44.4
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.6e-24 116.3 166 50.6
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 5.8e-24 115.2 179 41.9
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 5.8e-24 115.2 224 40.2
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 7.6e-24 114.8 162 42.0
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.7e-23 113.6 161 44.1
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 2.2e-23 113.2 194 46.4
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 2.2e-23 113.2 169 42.0
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.2e-23 113.2 204 48.5
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 4.9e-23 112.1 173 48.6
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 6.5e-23 111.7 165 39.4
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 8.4e-23 111.3 192 41.1
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.1e-22 110.9 194 45.9
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.1e-22 110.9 178 43.3
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.4e-22 110.5 183 42.6
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.4e-22 110.5 170 50.6
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 3.2e-22 109.4 177 40.7
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 7.1e-22 108.2 168 45.2
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 9.3e-22 107.8 174 39.7
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 9.3e-22 107.8 174 39.7
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 2.7e-21 106.3 166 48.2
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 3.5e-21 105.9 186 37.6
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 4.6e-21 105.5 151 41.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.6e-21 105.5 179 40.8
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 4.6e-21 105.5 188 38.8
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 4.6e-21 105.5 167 38.3
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 4.6e-21 105.5 177 37.3
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 7.9e-21 104.8 206 41.7
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 3.0e-20 102.8 186 39.2
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.0e-20 102.8 186 39.2
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 3.0e-20 102.8 151 43.0
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.9e-20 102.4 186 39.2
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 8.7e-20 101.3 183 41.0
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.1e-19 100.9 228 33.3
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.5e-19 100.5 157 42.0
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 1.9e-19 100.1 165 44.2
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 3.3e-19 99.4 160 42.5
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.3e-19 99.0 162 46.3
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 5.7e-19 98.6 186 37.6
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 7.4e-19 98.2 214 35.0
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 9.7e-19 97.8 217 34.6
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 2.2e-18 96.7 194 37.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 2.2e-18 96.7 146 42.5
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 4.8e-18 95.5 152 42.1
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.1e-17 94.4 186 38.2
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 3.1e-17 92.8 201 40.8
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 3.1e-17 92.8 181 35.9
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 3.1e-17 92.8 226 33.2
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 6.9e-17 91.7 178 38.8
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.5e-16 90.5 186 36.6
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 4.5e-16 89.0 169 48.5
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 1.0e-15 87.8 141 39.7
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.9e-14 83.6 188 38.3
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 2.5e-14 83.2 151 39.7
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 2.5e-14 83.2 110 48.2
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.2e-14 82.4 206 32.0
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 7.2e-14 81.6 180 45.0
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 9.4e-14 81.3 159 47.2
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 2.1e-13 80.1 192 32.8
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 8.8e-12 74.7 119 44.5
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.0e-11 73.6 133 39.8
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 7.4e-11 71.6 146 45.2
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 7.4e-11 71.6 125 40.8
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.3e-10 70.9 45 73.3
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.3e-10 70.9 57 70.2
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.7e-10 70.5 144 38.2
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.7e-10 69.3 146 34.2
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 4.8e-10 68.9 174 42.0
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 1.1e-09 67.8 192 35.4
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.8e-09 67.0 201 33.3
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.5e-08 63.9 101 44.6
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 1.0e-07 61.2 60 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 5.0e-07 58.9 60 55.0
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 9.4e-06 54.7 189 43.4


User provided reference genes

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