Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.1e-100 369.0 180 100.0
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 4.0e-88 328.2 180 92.2
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 7.6e-79 297.4 190 84.2
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 2.5e-66 255.8 166 83.7
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 8.5e-62 240.7 168 80.4
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 7.2e-45 184.5 188 62.2
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 2.7e-44 182.6 193 58.0
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.4e-43 180.3 196 59.2
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.8e-43 179.9 196 59.2
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 4.0e-43 178.7 185 61.6
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 2.0e-42 176.4 197 58.9
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.1e-40 170.6 196 56.6
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 1.0e-38 164.1 196 55.1
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 2.2e-38 162.9 197 54.3
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 2.5e-37 159.5 166 62.7
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 2.5e-37 159.5 166 62.7
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 1.6e-36 156.8 161 63.4
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 5.7e-34 148.3 163 59.5
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 3.7e-33 145.6 163 58.9
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.8e-24 116.7 206 45.1
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 5.9e-23 111.7 204 40.7
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 3.6e-20 102.4 193 43.5
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 3.0e-19 99.4 172 41.9
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 8.9e-19 97.8 203 38.9
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 8.9e-19 97.8 177 41.8
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 1.2e-18 97.4 199 40.2
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.5e-18 97.1 171 41.5
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.5e-18 97.1 73 72.6
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 1.5e-18 97.1 196 38.8
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.5e-18 97.1 204 39.7
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 3.4e-18 95.9 194 40.2
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 4.4e-18 95.5 184 41.3
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 4.4e-18 95.5 194 39.2
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 5.7e-18 95.1 177 39.0
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 9.8e-18 94.4 203 38.9
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 9.8e-18 94.4 203 38.9
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 9.8e-18 94.4 172 38.4
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 9.8e-18 94.4 179 41.3
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 1.3e-17 94.0 196 39.3
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.3e-17 94.0 183 38.8
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.3e-17 94.0 200 39.5
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.3e-17 94.0 200 39.5
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.7e-17 93.6 202 37.6
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 2.2e-17 93.2 198 38.4
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 2.9e-17 92.8 137 44.5
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 3.7e-17 92.4 52 82.7
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.7e-17 92.4 179 40.2
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.7e-17 92.4 153 39.9
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 4.9e-17 92.0 197 40.1
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 6.4e-17 91.7 172 40.1
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 6.4e-17 91.7 172 42.4
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 6.4e-17 91.7 192 39.1
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 8.3e-17 91.3 198 38.4
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 8.3e-17 91.3 202 40.1
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.1e-16 90.9 198 38.9
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.1e-16 90.9 201 38.8
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 1.4e-16 90.5 205 37.6
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.4e-16 90.5 152 43.4
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.4e-16 90.5 188 38.3
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 1.8e-16 90.1 209 36.8
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 1.8e-16 90.1 157 40.8
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 2.4e-16 89.7 200 40.0
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 2.4e-16 89.7 210 38.6
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 2.4e-16 89.7 200 36.0
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.4e-16 89.7 197 37.1
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 3.2e-16 89.4 197 35.5
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 3.2e-16 89.4 202 38.1
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 3.2e-16 89.4 196 37.2
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.2e-16 89.4 183 38.8
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.2e-16 89.4 179 39.7
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 5.4e-16 88.6 164 39.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 5.4e-16 88.6 162 39.5
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 5.4e-16 88.6 204 36.8
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 7.0e-16 88.2 188 38.3
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 7.0e-16 88.2 188 38.3
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 9.2e-16 87.8 183 39.9
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.2e-15 87.4 179 41.3
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 1.2e-15 87.4 128 42.2
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.2e-15 87.4 188 37.8
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.6e-15 87.0 188 37.2
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.6e-15 87.0 201 36.8
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.6e-15 87.0 185 40.0
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.6e-15 87.0 169 42.6
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.5e-15 85.9 180 39.4
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 3.5e-15 85.9 179 38.0
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 3.5e-15 85.9 159 40.9
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 4.6e-15 85.5 163 39.9
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 4.6e-15 85.5 180 39.4
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 5.9e-15 85.1 168 39.3
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 5.9e-15 85.1 201 38.8
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 5.9e-15 85.1 172 38.4
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 5.9e-15 85.1 198 38.4
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 7.8e-15 84.7 200 37.5
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 7.8e-15 84.7 174 38.5
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 1.0e-14 84.3 202 37.6
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.0e-14 84.3 157 39.5
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 1.0e-14 84.3 192 36.5
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 1.0e-14 84.3 166 38.6
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 2.3e-14 83.2 85 60.0
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 2.3e-14 83.2 192 34.9
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.3e-14 83.2 189 38.6
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 3.0e-14 82.8 206 35.4
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 5.0e-14 82.0 212 35.4
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 5.0e-14 82.0 187 34.8
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 5.0e-14 82.0 205 37.1
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 5.0e-14 82.0 140 39.3
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 5.0e-14 82.0 183 38.3
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 6.6e-14 81.6 195 34.9
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 6.6e-14 81.6 181 34.8
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 6.6e-14 81.6 154 41.6
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 6.6e-14 81.6 206 35.0
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 8.6e-14 81.3 160 33.1
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 8.6e-14 81.3 199 35.7
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.1e-13 80.9 197 36.0
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.5e-13 80.5 144 42.4
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.5e-13 80.5 193 34.7
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 1.5e-13 80.5 199 38.2
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.9e-13 80.1 182 36.8
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.9e-13 80.1 199 35.7
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.5e-13 79.7 213 34.3
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 2.5e-13 79.7 185 35.7
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 4.3e-13 79.0 177 37.9
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 4.3e-13 79.0 208 34.6
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 4.3e-13 79.0 160 41.2
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 5.6e-13 78.6 208 34.6
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.3e-13 78.2 164 35.4
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 7.3e-13 78.2 133 39.1
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 9.5e-13 77.8 182 36.3
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 2.1e-12 76.6 206 35.9
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 4.7e-12 75.5 112 45.5
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.8e-11 73.6 155 37.4
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 1.8e-11 73.6 176 35.8
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.8e-11 73.6 80 57.5
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 2.3e-11 73.2 59 66.1
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.3e-11 73.2 78 59.0
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 2.3e-11 73.2 67 61.2
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 3.1e-11 72.8 90 47.8
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 3.1e-11 72.8 82 56.1
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.2e-11 72.0 78 57.7
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 6.8e-11 71.6 168 33.9
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 8.9e-11 71.2 211 34.6
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 8.9e-11 71.2 190 33.7
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.5e-10 70.5 82 52.4
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 2.0e-10 70.1 168 33.3
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 2.0e-10 70.1 80 56.2
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.6e-10 69.7 82 53.7
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 2.6e-10 69.7 181 34.3
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 2.6e-10 69.7 59 62.7
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 3.4e-10 69.3 149 34.2
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 4.4e-10 68.9 78 56.4
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 4.4e-10 68.9 80 55.0
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 4.4e-10 68.9 80 55.0
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 7.5e-10 68.2 77 57.1
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.3e-09 67.4 57 61.4
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 1.3e-09 67.4 124 41.9
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 8.3e-09 64.7 78 52.6
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 2.7e-07 59.7 108 39.8
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 4.6e-07 58.9 67 49.3


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