Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22980 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-105 384.8 202 100.0
C02p36720 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-71 272.7 334 49.4
BcaC03g15909 Brassica carinata HOM05D000051 ORTHO05D000015 9.5e-70 267.3 322 50.3
BolC2t09676H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-64 250.0 328 47.6
Carub.0004s2887 Capsella rubella HOM05D000051 ORTHO05D000015 4.7e-45 185.3 318 38.7
CARHR141500 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.2e-45 184.9 323 39.3
BcaB05g25206 Brassica carinata HOM05D001395 ORTHO05D000532 3.1e-44 182.6 281 44.1
AL2G12050 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-42 177.2 318 39.9
Aa31sc947G30 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.1e-39 165.2 306 38.2
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.6e-35 152.9 331 36.3
Aa31sc352G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.4e-35 152.5 329 35.9
A09p40240 Brassica napus HOM05D000051 ORTHO05D000015 9.9e-35 151.0 320 35.3
BraA09t39522Z Brassica rapa HOM05D000051 ORTHO05D000015 9.9e-35 151.0 320 35.3
Aa31sc352G40 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.9e-34 148.7 345 34.2
Thhalv10009745m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.1e-33 144.8 337 34.1
Carub.0001s2407 Capsella rubella HOM05D000051 ORTHO05D000015 3.5e-32 142.5 341 34.0
AT1G22000 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.7e-31 140.2 333 34.8
AL1G38800 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.6e-31 138.3 350 33.1
AL1G38860 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.6e-31 138.3 350 33.1
AT1G26890 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.7e-31 137.9 340 34.1
Carub.0001s2408 Capsella rubella HOM05D000051 ORTHO05D000015 9.6e-30 134.4 351 31.6
Thhalv10009991m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.1e-29 131.3 352 32.1
Thhalv10009950m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.2e-27 127.5 322 34.8
C07p19700 Brassica napus HOM05D000051 ORTHO05D000015 4.9e-26 122.1 326 34.0
BolC7t42486H Brassica oleracea HOM05D000051 ORTHO05D000015 4.9e-26 122.1 326 34.0
Thhalv10019526m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.1e-25 118.2 151 48.3
Carub.0320s0001 Capsella rubella HOM05D000051 ORTHO05D000015 9.3e-25 117.9 352 31.0
CARHR024990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-24 117.5 333 31.2
BraA09t40121Z Brassica rapa HOM05D000051 ORTHO05D000015 2.1e-21 106.7 289 30.1
Carub.0007s3566 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-21 106.3 320 28.1
Thhalv10003402m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.6e-19 99.8 324 28.1
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 7.6e-19 98.2 325 28.9
AL3G22250 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.4e-17 94.0 319 28.2
AL3G22230 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.2e-17 92.8 331 27.2
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 4.2e-17 92.4 324 27.5
BcaC07g39717 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-16 90.1 341 26.7
BolC8t50491H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-16 90.1 341 26.7
Carub.0003s0998 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-16 89.7 334 26.9
Carub.0007s3567 Capsella rubella HOM05D000051 ORTHO05D000015 4.6e-16 89.0 326 26.7
AT5G44850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.0e-16 88.6 270 30.0
Carub.0008s0417 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-15 87.4 227 33.0
Sp3g09080 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.8e-15 87.0 324 28.1
BraA05t22638Z Brassica rapa HOM05D000051 ORTHO05D000015 2.3e-15 86.7 276 29.3
Thhalv10028298m.g Eutrema salsugineum HOM05D000051 ORTHO05D018454 2.3e-15 86.7 195 36.4
Thhalv10029383m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.3e-15 86.7 235 31.5
AL1G14840 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.0e-15 86.3 329 26.4
C08p12680 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-15 86.3 309 27.5
Carub.0007s0781 Capsella rubella HOM05D000051 ORTHO05D000015 3.9e-15 85.9 329 26.4
CARHR175950 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.9e-15 85.9 264 29.9
C08p12660 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-14 84.3 309 27.5
Carub.0006s0548 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-14 84.3 266 25.2
Thhalv10001111m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-14 84.3 327 26.6
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-14 84.3 347 26.2
AL7G49240 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.9e-14 83.6 232 31.5
AT1G05080 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.9e-14 83.6 333 27.0
C09p14210 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-14 83.6 300 28.0
A08p34630 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-14 83.2 308 26.6
BraA08t35372Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-14 83.2 309 27.5
Carub.0007s2619 Capsella rubella HOM05D000051 ORTHO05D000015 3.3e-14 82.8 320 27.2
AL6G35130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.3e-14 82.4 320 26.9
BcaC06g31631 Brassica carinata HOM05D000051 ORTHO05D000015 5.7e-14 82.0 325 26.2
BolC8t48903H Brassica oleracea HOM05D000051 ORTHO05D000015 9.6e-14 81.3 308 25.6
Carub.0008s1685 Capsella rubella HOM05D000051 ORTHO05D000015 9.6e-14 81.3 324 24.7
AL3G22240 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 2.8e-13 79.7 310 28.7
C07p27010 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-13 79.7 324 24.7
CARHR158440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.8e-13 79.7 333 24.9
Carub.0002s0899 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-13 79.3 176 36.4
Carub.0008s0420 Capsella rubella HOM05D000051 ORTHO05D000015 4.8e-13 79.0 326 24.8
BcaC06g34571 Brassica carinata HOM05D000051 ORTHO05D000015 8.2e-13 78.2 321 24.6
BraA08t35374Z Brassica rapa HOM05D000051 ORTHO05D000015 8.2e-13 78.2 350 25.7
A05p38480 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-12 77.8 322 27.0
Thhalv10011126m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-12 77.8 186 31.2
AL1G38680 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-12 77.0 78 60.3
Thhalv10028348m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-12 76.6 327 24.8
AT3G10750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-12 76.3 256 28.5
BolC7t43232H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-12 76.3 331 24.2
A08p34660 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-12 75.9 372 25.0
C04p66770 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-12 75.9 175 28.6
BraA08t35378Z Brassica rapa HOM05D000051 ORTHO05D000015 4.1e-12 75.9 372 25.0
Thhalv10029506m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.3e-12 75.5 66 53.0
BcaB03g11993 Brassica carinata HOM05D000051 ORTHO05D018454 6.9e-12 75.1 79 50.6
BolC7t46369H Brassica oleracea HOM05D000051 ORTHO05D000015 1.5e-11 73.9 306 26.5
C03p36450 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-11 73.6 189 30.2
BolC3t15957H Brassica oleracea HOM05D000051 ORTHO05D000015 2.0e-11 73.6 189 30.2
BcaB01g00264 Brassica carinata HOM05D000051 ORTHO05D000015 2.6e-11 73.2 298 26.5
A03p59830 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-11 73.2 248 29.4
Thhalv10028299m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.6e-11 73.2 329 24.9
BcaC06g36412 Brassica carinata HOM05D000051 ORTHO05D000015 4.5e-11 72.4 285 25.3
BcaC02g07457 Brassica carinata HOM05D000051 ORTHO05D000015 5.8e-11 72.0 324 24.1
C04p66760 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-11 72.0 324 24.1
AT5G40750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.3e-10 70.9 225 28.0
A03p61410 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-10 70.9 309 26.2
BolC5t30949H Brassica oleracea HOM05D000051 ORTHO05D000015 1.7e-10 70.5 325 25.8
BolC5t34431H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-10 69.7 331 25.7
BraA03t15039Z Brassica rapa HOM05D000051 ORTHO05D000015 2.9e-10 69.7 307 26.1
BraA04t16308Z Brassica rapa HOM05D000051 ORTHO05D000015 2.9e-10 69.7 327 24.2
Thhalv10015668m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-10 69.7 260 27.3
Sp5g13500 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.9e-10 69.7 287 24.4
AL4G25900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.0e-10 68.9 296 26.4
AL8G15660 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.0e-10 68.9 63 54.0
C08p28890 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-10 68.9 73 47.9
BcaC02g09153 Brassica carinata HOM05D000051 ORTHO05D000015 8.4e-10 68.2 319 24.5
BcaC07g38494 Brassica carinata HOM05D000051 ORTHO05D000015 8.4e-10 68.2 189 28.0
BolC4t25471H Brassica oleracea HOM05D000051 ORTHO05D000015 8.4e-10 68.2 319 24.5
C05p22510 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-09 67.8 177 30.5
BolC8t48902H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-09 67.8 190 27.9
AL1G38830 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.4e-09 67.4 50 64.0
A09p41460 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-09 67.0 323 26.0
BraA03t12204Z Brassica rapa HOM05D000051 ORTHO05D000015 1.9e-09 67.0 200 32.0
Carub.0006s2253 Capsella rubella HOM05D000051 ORTHO05D000015 2.5e-09 66.6 331 24.5
Carub.0008s0416 Capsella rubella HOM05D000051 ORTHO05D000015 2.5e-09 66.6 101 39.6
C05p57630 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-09 65.9 332 24.4
Aa31LG7G1450 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.5e-09 65.5 256 28.5
BcaC05g29466 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-09 65.5 332 24.1
C05p57720 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-09 65.5 332 24.1
BolC5t34421H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-09 65.5 332 24.1
Carub.0008s1256 Capsella rubella HOM05D000051 ORTHO05D000015 5.5e-09 65.5 276 25.0
BolC9t54319H Brassica oleracea HOM05D000051 ORTHO05D000015 7.1e-09 65.1 66 48.5
C07p04350 Brassica napus HOM05D000051 ORTHO05D000015 9.3e-09 64.7 188 28.2
CARHR178840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-08 64.3 67 43.3
AL8G32130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-08 63.9 324 25.0
A03p30200 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-08 63.9 113 40.7
C05p57740 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-08 63.9 357 24.1
CARHR222700 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.6e-08 63.9 324 22.8
Aa31LG5G22000 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.7e-08 63.2 81 48.1
C04p39010 Brassica napus HOM05D000051 ORTHO05D000015 2.7e-08 63.2 345 23.2
BraA09t39638Z Brassica rapa HOM05D000051 ORTHO05D000015 3.5e-08 62.8 323 25.7
Thhalv10005273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.6e-08 62.4 89 39.3
Carub.0001s0436 Capsella rubella HOM05D000051 ORTHO05D000015 6.1e-08 62.0 328 25.3
BcaNung04924 Brassica carinata HOM05D000051 ORTHO05D000015 7.9e-08 61.6 330 24.8
Aa31LG3G3950 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.0e-07 61.2 261 28.0
BcaNung03949 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-07 61.2 156 30.1
Thhalv10022347m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.0e-07 61.2 299 25.1
Thhalv10017690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-07 60.5 161 27.3
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.9e-07 59.3 171 28.7
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-07 58.9 165 29.7
BolC4t28178H Brassica oleracea HOM05D000051 ORTHO05D000015 5.1e-07 58.9 64 43.8
BcaC05g26239 Brassica carinata HOM05D000051 ORTHO05D000015 6.7e-07 58.5 143 35.7
BolC5t34393H Brassica oleracea HOM05D000051 ORTHO05D000015 6.7e-07 58.5 65 47.7
Aa31LG5G14290 Aethionema arabicum HOM05D000051 ORTHO05D000015 8.7e-07 58.2 82 43.9
AL6G36280 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.7e-07 58.2 286 25.2
BcaNung03591 Brassica carinata HOM05D000051 ORTHO05D018454 1.5e-06 57.4 70 47.1
A03p58230 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 57.4 100 40.0
A03p58240 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 57.4 100 40.0
BraA03t14888Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-06 57.4 100 40.0
BraA05t22637Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-06 57.4 288 25.7
Aa31LG3G3930 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.9e-06 57.0 81 40.7
BcaC05g29468 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-06 57.0 307 25.4
Aa31LG8G16210 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.5e-06 56.6 77 45.5
Aa31LG9G8860 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.5e-06 56.6 78 41.0
CARHR158480 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.5e-06 56.6 79 40.5
C05p57370 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 56.2 65 46.2
C05p57380 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 56.2 143 34.3
C09p41740 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 56.2 169 27.8
BolC9t57060H Brassica oleracea HOM05D000051 ORTHO05D000015 3.3e-06 56.2 169 27.8
CARHR174900 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.3e-06 56.2 58 46.6
AL4G24690 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.7e-06 55.5 210 26.7
AL8G26900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.7e-06 55.5 62 43.5
CARHR265450 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.7e-06 55.5 271 29.5
AL8G31960 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.4e-06 55.1 155 32.9
AT3G49480 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.4e-06 55.1 75 38.7
BcaC03g14224 Brassica carinata HOM05D000051 ORTHO05D000015 7.4e-06 55.1 68 45.6
C02p15270 Brassica napus HOM05D000051 ORTHO05D000015 7.4e-06 55.1 68 45.6
BolC8t47332H Brassica oleracea HOM05D026062 ORTHO05D028232 7.4e-06 55.1 110 40.0
Carub.0006s3287 Capsella rubella HOM05D000051 ORTHO05D000015 7.4e-06 55.1 47 53.2
Thhalv10029164m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.4e-06 55.1 254 25.6
A04p06040 Brassica napus HOM05D000051 ORTHO05D000015 9.7e-06 54.7 98 34.7
A05p38470 Brassica napus HOM05D000051 ORTHO05D000015 9.7e-06 54.7 112 37.5
CARHR158470 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.7e-06 54.7 79 38.0
Thhalv10015747m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.7e-06 54.7 71 43.7


User provided reference genes

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