Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 1.0e-87 326.6 159 100.0
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 5.1e-87 324.3 159 99.4
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 7.4e-86 320.5 159 97.5
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.8e-85 318.5 159 97.5
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 6.3e-85 317.4 159 96.2
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.4e-84 316.2 159 96.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.4e-76 289.7 156 87.8
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.4e-76 289.7 155 87.1
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 7.0e-76 287.3 156 87.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 7.7e-75 283.9 156 87.8
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 9.8e-70 266.9 155 83.2
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.6e-64 249.6 156 73.7
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 5.2e-63 244.6 174 69.0
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 6.8e-63 244.2 155 73.5
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 7.5e-62 240.7 154 73.4
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 9.8e-62 240.4 153 71.2
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 8.3e-61 237.3 155 71.0
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 5.4e-60 234.6 158 69.0
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.4e-60 234.6 158 69.0
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 1.6e-59 233.0 152 72.4
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 4.5e-59 231.5 152 72.4
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 5.9e-59 231.1 158 69.0
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 7.7e-59 230.7 164 70.1
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.3e-58 229.9 159 68.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.3e-58 229.9 164 69.5
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.3e-58 229.9 158 69.6
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.3e-58 229.2 158 70.9
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.3e-58 229.2 158 70.9
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 2.9e-58 228.8 154 69.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 5.0e-58 228.0 160 66.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 8.6e-58 227.3 154 68.8
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 8.6e-58 227.3 154 69.5
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.5e-57 226.5 157 72.0
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.5e-57 226.5 157 66.9
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.5e-57 226.5 154 68.8
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.9e-57 226.1 165 67.3
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 2.5e-57 225.7 161 69.6
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.5e-57 225.7 152 70.4
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 7.2e-57 224.2 153 70.6
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 9.5e-57 223.8 160 66.2
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.2e-56 223.4 159 65.4
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.6e-56 223.0 153 69.3
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.6e-56 223.0 159 66.7
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 3.6e-56 221.9 159 67.3
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 3.6e-56 221.9 155 70.3
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 4.7e-56 221.5 153 68.6
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 8.0e-56 220.7 152 67.8
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 8.0e-56 220.7 153 68.0
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 8.0e-56 220.7 153 68.6
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.0e-55 220.3 152 66.4
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.4e-55 219.9 153 68.6
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.3e-55 219.2 159 67.3
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 4.0e-55 218.4 157 65.6
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-55 218.0 157 69.4
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-55 218.0 157 69.4
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 6.8e-55 217.6 157 66.2
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.2e-54 216.9 157 65.0
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.2e-54 216.9 157 70.1
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 2.6e-54 215.7 157 65.0
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.4e-54 215.3 191 55.5
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 4.4e-54 214.9 157 65.0
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 5.7e-54 214.5 153 66.7
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 5.7e-54 214.5 158 65.8
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 9.8e-54 213.8 166 62.7
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.3e-53 213.4 158 65.8
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.9e-53 212.2 153 66.0
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 8.3e-53 210.7 164 62.2
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.4e-52 209.9 164 64.6
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 5.4e-52 208.0 153 65.4
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.2e-51 206.8 158 63.3
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.0e-51 206.1 156 62.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 2.0e-51 206.1 153 64.7
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 2.0e-51 206.1 152 67.1
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 2.7e-51 205.7 153 65.4
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.5e-51 205.3 164 62.2
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.5e-51 205.3 164 62.2
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 4.6e-51 204.9 159 64.2
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 5.9e-51 204.5 193 55.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 5.9e-51 204.5 153 64.1
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.3e-50 203.4 153 64.1
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.7e-50 203.0 159 62.9
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 8.6e-50 200.7 151 62.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.5e-49 199.9 157 61.8
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 7.3e-49 197.6 150 61.3
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.0e-47 193.7 159 62.3
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.0e-47 193.7 227 47.6
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 5.8e-46 188.0 133 66.9
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 4.9e-45 184.9 150 60.0
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 1.0e-42 177.2 115 67.8
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 6.6e-42 174.5 121 70.2
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 1.5e-41 173.3 123 67.5
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.9e-41 172.9 114 71.1
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.1e-40 167.5 157 56.1
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.4e-39 166.8 113 69.0
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 6.4e-37 157.9 110 69.1
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.7e-35 152.5 108 66.7
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.6e-35 151.8 152 54.6
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.9e-33 146.4 89 76.4
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 6.2e-32 141.4 90 72.2
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 8.9e-31 137.5 155 47.1
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.2e-22 110.5 72 69.4
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.9e-17 93.2 95 53.7
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 1.6e-11 73.6 61 59.0
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.3e-10 69.7 81 50.6
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 5.6e-09 65.1 53 56.6
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.3e-08 63.9 45 60.0


User provided reference genes

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