Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22610 Brassica napus HOM05D011693 ORTHO05D023959 1.9e-86 322.4 151 100.0
BcaB05g25172 Brassica carinata HOM05D011693 ORTHO05D023959 1.1e-62 243.4 152 76.3
BraA02t07264Z Brassica rapa HOM05D011693 ORTHO05D023959 3.9e-44 181.8 87 98.9
BolC2t09638H Brassica oleracea HOM05D011693 ORTHO05D023959 6.1e-37 157.9 85 89.4
C02p36250 Brassica napus HOM05D011693 ORTHO05D023959 1.3e-36 156.8 85 88.2
C02p36200 Brassica napus HOM05D011693 ORTHO05D017562 2.2e-26 122.9 134 48.5
C02p36240 Brassica napus HOM05D011693 ORTHO05D017562 3.7e-26 122.1 150 44.0
BolC2t09634H Brassica oleracea HOM05D011693 ORTHO05D017562 3.7e-26 122.1 134 47.8
BolC2t09637H Brassica oleracea HOM05D011693 ORTHO05D017562 3.7e-26 122.1 150 44.0
A02p22580 Brassica napus HOM05D011693 ORTHO05D017562 8.2e-26 120.9 137 46.7
BraA02t07262Z Brassica rapa HOM05D011693 ORTHO05D017562 8.2e-26 120.9 137 46.7
A02p22560 Brassica napus HOM05D011693 ORTHO05D017562 2.4e-25 119.4 134 48.5
BraA02t07261Z Brassica rapa HOM05D011693 ORTHO05D017562 2.4e-25 119.4 134 48.5
A02p22640 Brassica napus HOM05D011693 ORTHO05D040107 2.0e-19 99.8 153 38.6
BcaB05g25174 Brassica carinata HOM05D011693 ORTHO05D017562 1.8e-17 93.2 150 39.3
CARHR102040 Cardamine hirsuta HOM05D004904 ORTHO05D012610 9.1e-17 90.9 136 35.3
C06p30060 Brassica napus HOM05D004904 ORTHO05D012610 1.9e-14 83.2 137 37.2
BolC6t38167H Brassica oleracea HOM05D004904 ORTHO05D012610 1.9e-14 83.2 137 37.2
A07p27280 Brassica napus HOM05D004904 ORTHO05D012610 4.2e-14 82.0 137 37.2
BraA07t30371Z Brassica rapa HOM05D004904 ORTHO05D012610 4.2e-14 82.0 137 37.2
Carub.0002s1683 Capsella rubella HOM05D004904 ORTHO05D012993 1.2e-13 80.5 133 35.3
CARHR102030 Cardamine hirsuta HOM05D004904 ORTHO05D012610 3.6e-13 79.0 133 36.8
BolC6t38173H Brassica oleracea HOM05D004904 ORTHO05D012610 8.0e-13 77.8 136 35.3
Thhalv10005414m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 1.0e-12 77.4 149 37.6
AT2G04115 Arabidopsis thaliana HOM05D004904 ORTHO05D012610 5.2e-12 75.1 133 35.3
BraA07t30372Z Brassica rapa HOM05D004904 ORTHO05D012610 8.8e-12 74.3 137 33.6
AL2G29420 Arabidopsis lyrata HOM05D004904 ORTHO05D012993 3.3e-11 72.4 150 30.7
AT1G09245 Arabidopsis thaliana HOM05D004904 ORTHO05D015396 3.7e-10 68.9 153 33.3
Thhalv10005700m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 3.7e-10 68.9 149 28.2
BcaC07g41901 Brassica carinata HOM05D004904 ORTHO05D015396 6.3e-10 68.2 145 31.7
BcaC07g41902 Brassica carinata HOM05D004904 ORTHO05D015396 6.3e-10 68.2 145 31.7
C08p49560 Brassica napus HOM05D004904 ORTHO05D015396 6.3e-10 68.2 145 31.7
BolC8t52492H Brassica oleracea HOM05D004904 ORTHO05D015396 6.3e-10 68.2 145 31.7
BraA09t41901Z Brassica rapa HOM05D004904 ORTHO05D015396 8.2e-10 67.8 146 32.2
BraA04t16123Z Brassica rapa HOM05D004904 ORTHO05D012458 3.1e-09 65.9 135 32.6
BcaC08g45375 Brassica carinata HOM05D004904 ORTHO05D012610 9.1e-09 64.3 105 36.2
Carub.0001s4014 Capsella rubella HOM05D004904 ORTHO05D012458 9.1e-09 64.3 135 35.6
CARHR216070 Cardamine hirsuta HOM05D004904 ORTHO05D010762 9.1e-09 64.3 150 34.0
BolC4t25152H Brassica oleracea HOM05D004904 ORTHO05D012458 1.2e-08 63.9 135 32.6
Thhalv10005113m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 1.2e-08 63.9 149 30.9
A02p42370 Brassica napus HOM05D004904 ORTHO05D010762 1.6e-08 63.5 136 33.1
BraA02t09168Z Brassica rapa HOM05D004904 ORTHO05D010762 1.6e-08 63.5 136 33.1
C06p30120 Brassica napus HOM05D004904 ORTHO05D012610 2.7e-08 62.8 124 32.3
CARHR057800 Cardamine hirsuta HOM05D004904 ORTHO05D010762 4.5e-08 62.0 137 34.3
Thhalv10015293m.g Eutrema salsugineum HOM05D004904 ORTHO05D015396 4.5e-08 62.0 136 32.4
BolC2t12283H Brassica oleracea HOM05D004904 ORTHO05D010762 5.9e-08 61.6 136 33.1
Carub.0003s2589 Capsella rubella HOM05D004904 ORTHO05D012610 7.7e-08 61.2 134 33.6
Carub.0007s2940 Capsella rubella HOM05D004904 ORTHO05D010762 7.7e-08 61.2 147 29.9
AT1G51240 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 1.0e-07 60.8 134 32.8
BraA09t36422Z Brassica rapa HOM05D004904 ORTHO05D010762 1.7e-07 60.1 136 33.8
CARHR220080 Cardamine hirsuta HOM05D004904 ORTHO05D012458 1.7e-07 60.1 136 33.8
A07p27310 Brassica napus HOM05D004904 ORTHO05D012610 2.9e-07 59.3 125 30.4
A09p07720 Brassica napus HOM05D004904 ORTHO05D010762 2.9e-07 59.3 134 33.6
AT1G51250 Arabidopsis thaliana HOM05D004904 ORTHO05D012458 3.8e-07 58.9 129 29.5
A09p07740 Brassica napus HOM05D004904 ORTHO05D010762 6.5e-07 58.2 138 30.4
Thhalv10002725m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 6.5e-07 58.2 132 31.8
BcaC04g23408 Brassica carinata HOM05D004904 ORTHO05D010762 8.5e-07 57.8 134 32.8
C08p44310 Brassica napus HOM05D004904 ORTHO05D012458 8.5e-07 57.8 140 30.7
C09p08640 Brassica napus HOM05D004904 ORTHO05D010762 8.5e-07 57.8 134 32.8
BolC8t51974H Brassica oleracea HOM05D004904 ORTHO05D012458 8.5e-07 57.8 140 30.7
BolC9t53775H Brassica oleracea HOM05D004904 ORTHO05D010762 8.5e-07 57.8 134 32.8
CARHR112870 Cardamine hirsuta HOM05D004904 ORTHO05D010762 8.5e-07 57.8 149 30.9
AL1G57680 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 1.1e-06 57.4 136 33.8
CARHR041320 Cardamine hirsuta HOM05D004904 ORTHO05D012458 1.1e-06 57.4 138 34.8
A03p36000 Brassica napus HOM05D020264 ORTHO05D033075 1.5e-06 57.0 150 27.3
BolC2t09640H Brassica oleracea HOM05D011693 ORTHO05D040107 1.5e-06 57.0 77 39.0
BraA03t12772Z Brassica rapa HOM05D020264 ORTHO05D033075 1.5e-06 57.0 150 27.3
Carub.0001s4015 Capsella rubella HOM05D004904 ORTHO05D012458 1.5e-06 57.0 135 32.6
CARHR216060 Cardamine hirsuta HOM05D004904 ORTHO05D010762 1.5e-06 57.0 137 32.8
Carub.0007s2938 Capsella rubella HOM05D004904 ORTHO05D010762 1.9e-06 56.6 159 28.3
A10p15680 Brassica napus HOM05D004904 ORTHO05D010762 2.5e-06 56.2 134 32.1
BraA10t43666Z Brassica rapa HOM05D004904 ORTHO05D010762 2.5e-06 56.2 134 32.1
Carub.0007s2936 Capsella rubella HOM05D004904 ORTHO05D010762 2.5e-06 56.2 148 29.7
Thhalv10023818m.g Eutrema salsugineum HOM05D004904 ORTHO05D012610 2.5e-06 56.2 117 36.8
AL1G59050 Arabidopsis lyrata HOM05D004904 ORTHO05D012458 5.5e-06 55.1 112 33.0
BolC3t16633H Brassica oleracea HOM05D020264 ORTHO05D033075 5.5e-06 55.1 158 25.9


User provided reference genes

Program Settings