Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 1.6e-258 895.6 447 100.0
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 1.2e-250 869.4 447 97.1
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 2.1e-247 858.6 449 95.3
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 9.9e-245 849.7 449 94.0
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 4.5e-229 797.7 450 89.8
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 1.7e-228 795.8 454 89.6
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 1.7e-228 795.8 454 89.6
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 1.4e-227 792.7 453 89.4
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 2.7e-226 788.5 456 89.5
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.3e-225 786.2 449 89.5
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.1e-224 783.1 452 88.1
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 2.1e-223 778.9 452 87.8
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 3.7e-223 778.1 452 87.8
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 3.7e-223 778.1 452 87.8
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 1.8e-222 775.8 452 87.6
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 5.3e-222 774.2 452 87.4
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 2.6e-221 771.9 457 88.8
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 1.3e-217 759.6 450 85.6
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 1.8e-217 759.2 448 86.2
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 9.0e-214 746.9 452 84.7
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 7.9e-202 707.2 451 82.0
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 4.4e-192 674.9 449 78.4
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 2.8e-191 672.2 453 77.3
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 9.4e-187 657.1 448 75.9
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 3.0e-185 652.1 337 95.0
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 8.8e-185 650.6 450 75.1
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 1.4e-182 643.3 448 74.1
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 2.9e-180 635.6 450 73.1
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 6.1e-178 627.9 451 71.6
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 8.0e-178 627.5 452 71.2
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.0e-177 627.1 452 72.3
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 2.3e-177 625.9 452 72.3
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.2e-176 623.6 460 71.1
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 3.4e-176 622.1 450 73.8
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 4.8e-175 618.2 453 70.0
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 4.8e-175 618.2 459 71.0
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 5.4e-174 614.8 452 71.9
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 5.4e-174 614.8 452 70.1
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.6e-173 613.2 449 71.7
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 1.6e-173 613.2 449 71.7
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.0e-173 612.8 450 72.2
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 1.9e-171 606.3 451 70.7
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 9.5e-171 604.0 451 71.0
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 1.6e-170 603.2 449 70.4
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 4.7e-170 601.7 452 69.2
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 3.0e-169 599.0 465 67.5
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 5.2e-169 598.2 452 67.7
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 2.6e-168 595.9 450 67.3
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 9.8e-168 594.0 451 68.3
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 1.7e-167 593.2 452 67.5
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 4.9e-167 591.7 457 67.6
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 4.9e-167 591.7 454 68.5
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 8.3e-167 590.9 442 70.4
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 8.3e-167 590.9 451 67.0
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 1.8e-166 589.7 452 69.7
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.5e-165 585.5 454 68.1
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 3.5e-165 585.5 452 68.4
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 4.5e-165 585.1 449 68.6
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 7.8e-165 584.3 450 68.4
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 7.8e-165 584.3 446 68.2
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.0e-164 583.9 453 67.3
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.3e-164 583.6 450 67.6
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 2.9e-164 582.4 472 66.9
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 3.8e-164 582.0 451 68.3
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.8e-164 582.0 453 67.3
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 5.0e-164 581.6 452 66.8
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 1.5e-163 580.1 451 65.6
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.3e-163 578.9 453 67.3
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 4.3e-163 578.6 449 66.4
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 7.3e-163 577.8 453 67.3
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 1.2e-162 577.0 451 67.2
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 3.6e-162 575.5 455 65.5
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 1.4e-161 573.5 463 67.2
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 1.4e-161 573.5 485 63.5
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 4.0e-161 572.0 472 65.9
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 1.2e-160 570.5 461 66.2
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 1.2e-160 570.5 450 67.3
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 1.2e-160 570.5 447 67.1
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 5.8e-160 568.2 468 65.6
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 9.8e-160 567.4 452 66.8
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 9.8e-160 567.4 451 65.2
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 9.8e-160 567.4 450 66.9
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 6.4e-159 564.7 452 65.7
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 3.2e-158 562.4 451 67.0
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 4.1e-158 562.0 451 65.4
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 4.1e-158 562.0 449 67.3
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.6e-157 560.1 433 68.4
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 1.6e-157 560.1 447 66.2
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 2.0e-157 559.7 454 66.5
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 7.8e-157 557.8 454 66.3
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 7.8e-157 557.8 451 65.6
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.0e-156 557.4 452 64.8
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 1.3e-156 557.0 531 58.2
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.7e-156 556.6 453 66.7
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 6.6e-156 554.7 451 64.5
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 8.6e-156 554.3 452 65.9
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 8.6e-156 554.3 447 65.5
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 9.5e-155 550.8 447 65.1
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 2.1e-154 549.7 450 65.1
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 3.6e-154 548.9 434 67.7
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 3.6e-154 548.9 447 65.3
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 4.7e-154 548.5 440 66.6
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 4.0e-153 545.4 485 61.0
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.4e-152 542.3 454 64.1
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 2.9e-151 539.3 448 64.7
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 6.4e-151 538.1 448 64.7
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 5.4e-150 535.0 447 63.8
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 7.0e-150 534.6 455 64.0
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 7.0e-150 534.6 454 63.9
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 1.9e-147 526.6 423 66.4
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.2e-146 523.9 450 62.9
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 2.8e-146 522.7 413 66.1
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 4.7e-146 521.9 450 62.7
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.8e-145 520.0 450 63.6
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 2.6e-144 516.2 521 54.5
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 3.4e-144 515.8 449 62.1
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 2.2e-143 513.1 442 63.6
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 2.9e-143 512.7 440 61.8
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.3e-140 503.8 452 62.2
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 2.3e-140 503.1 464 59.1
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 2.8e-138 496.1 411 64.7
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 3.6e-138 495.7 444 58.8
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 1.5e-136 490.3 452 59.5
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.7e-133 479.6 434 60.1
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.3e-132 476.5 436 61.7
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 1.6e-130 470.3 420 60.0
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 2.4e-129 466.5 458 58.1
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.7e-125 453.0 413 62.5
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 3.2e-118 429.5 291 73.9
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.2e-117 427.6 436 55.7
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 1.0e-116 424.5 507 52.3
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 3.1e-113 412.9 387 57.4
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 2.3e-108 396.7 447 49.9
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 3.3e-107 392.9 459 49.7
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.1e-105 387.9 316 65.2
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 2.4e-105 386.7 451 49.7
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 9.7e-99 364.8 252 74.2
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 9.0e-97 358.2 444 45.9
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 4.1e-89 332.8 195 86.7
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 1.7e-87 327.4 323 58.5
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.5e-86 323.6 306 59.2
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 2.9e-79 300.1 195 76.9
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 6.5e-79 298.9 444 41.9
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 8.2e-74 282.0 345 47.5
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 6.5e-71 272.3 216 63.4
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 3.4e-67 260.0 284 54.2
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 6.3e-66 255.8 195 67.2
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 7.0e-65 252.3 522 35.8
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 8.0e-61 238.8 201 61.7
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 2.0e-59 234.2 151 78.1
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 1.6e-56 224.6 235 56.2
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 2.7e-56 223.8 119 93.3
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 3.5e-56 223.4 187 64.7
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 1.4e-52 211.5 255 49.8
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 6.3e-50 202.6 270 45.2
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 5.6e-46 189.5 219 48.9
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 2.8e-45 187.2 131 74.0
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 4.0e-44 183.3 173 54.9
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.2e-43 181.8 138 68.1
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 3.2e-41 173.7 320 35.9
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 8.1e-37 159.1 471 28.2
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 2.0e-35 154.5 343 32.4
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 2.4e-33 147.5 158 53.8
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 4.7e-29 133.3 165 45.5
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 5.2e-28 129.8 74 89.2
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 2.6e-27 127.5 79 84.8
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 1.2e-24 118.6 102 55.9
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 2.1e-24 117.9 87 64.4
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 5.6e-22 109.8 114 56.1
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 4.9e-18 96.7 114 50.9
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 2.7e-16 90.9 157 44.6
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 6.6e-15 86.3 128 45.3
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 6.6e-15 86.3 112 50.9
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.6e-13 81.6 53 79.2
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 7.6e-11 72.8 51 70.6
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 2.2e-10 71.2 54 75.9
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 1.2e-08 65.5 76 52.6
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 1.3e-07 62.0 63 50.8
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.9e-06 58.2 46 67.4
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 1.9e-06 58.2 36 69.4


User provided reference genes

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