Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 1.7e-153 546.2 317 100.0
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 1.2e-151 540.0 317 99.7
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 2.2e-145 519.2 317 97.2
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 2.8e-145 518.8 317 96.8
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 1.8e-144 516.2 317 96.8
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 9.2e-128 460.7 318 82.1
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 8.3e-121 437.6 332 76.8
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 8.3e-121 437.6 332 76.8
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 8.3e-121 437.6 332 76.8
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-117 427.2 332 75.6
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 5.2e-115 418.3 328 82.0
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 9.2e-112 407.5 328 80.2
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.6e-108 396.7 345 75.7
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 5.2e-107 391.7 353 74.5
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 2.6e-106 389.4 349 73.9
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 2.9e-105 386.0 339 75.2
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 7.8e-103 377.9 353 72.5
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 2.4e-99 366.3 357 69.7
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 2.6e-98 362.8 357 69.7
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 2.2e-97 359.8 346 70.2
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 5.6e-93 345.1 357 67.2
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-90 337.4 353 67.4
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.2e-90 337.4 353 67.4
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.2e-90 337.4 353 67.4
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 1.8e-78 297.0 332 59.3
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.1e-69 267.7 348 54.0
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 3.1e-67 259.6 330 54.2
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 6.9e-67 258.5 345 54.2
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 7.6e-66 255.0 337 56.4
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 3.8e-65 252.7 335 53.1
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 1.4e-64 250.8 325 52.0
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 3.2e-64 249.6 323 52.6
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 5.1e-62 242.3 353 46.5
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.1e-61 241.1 338 53.3
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 5.7e-61 238.8 326 54.6
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 2.8e-60 236.5 346 47.4
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 2.4e-59 233.4 355 43.4
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 3.1e-59 233.0 337 48.4
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 4.1e-59 232.6 357 43.4
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 4.1e-59 232.6 361 44.3
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 9.1e-59 231.5 350 45.4
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.2e-58 231.1 355 43.4
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 3.4e-58 229.6 353 47.6
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 3.4e-58 229.6 361 46.5
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 4.5e-58 229.2 324 53.4
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 5.9e-58 228.8 356 43.0
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.7e-57 227.3 358 43.0
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 1.7e-57 227.3 362 47.2
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 3.8e-57 226.1 363 42.7
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 1.1e-56 224.6 347 43.8
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.4e-56 224.2 331 45.0
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 1.9e-56 223.8 325 47.7
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 1.9e-56 223.8 325 47.7
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 1.9e-56 223.8 325 47.7
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 2.5e-56 223.4 380 44.2
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 3.2e-56 223.0 341 46.3
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 5.5e-56 222.2 324 48.8
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 5.5e-56 222.2 348 47.4
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 7.2e-56 221.9 354 42.7
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.2e-55 221.1 357 43.1
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.6e-55 220.7 339 42.8
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 2.1e-55 220.3 330 47.6
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.1e-55 220.3 340 45.6
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 6.1e-55 218.8 347 45.5
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 5.1e-54 215.7 369 45.8
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 1.1e-53 214.5 339 42.5
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 1.1e-53 214.5 336 47.6
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 1.5e-53 214.2 355 43.1
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 2.0e-53 213.8 365 41.1
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 4.4e-53 212.6 350 41.4
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 5.7e-53 212.2 364 46.2
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 1.3e-52 211.1 313 48.6
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-52 210.7 311 45.0
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 2.2e-52 210.3 311 46.9
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 4.8e-52 209.1 346 41.6
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 4.8e-52 209.1 363 41.9
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 8.2e-52 208.4 342 43.6
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 8.2e-52 208.4 355 40.3
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.4e-51 206.8 346 46.0
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 3.1e-51 206.5 311 45.0
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 3.1e-51 206.5 342 47.4
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 3.1e-51 206.5 363 43.0
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 9.1e-51 204.9 344 41.0
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.2e-50 204.5 346 45.7
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 1.2e-50 204.5 353 45.0
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 2.0e-50 203.8 371 42.3
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 2.6e-50 203.4 337 42.7
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 3.4e-50 203.0 340 43.8
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 5.9e-50 202.2 370 39.2
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 7.7e-50 201.8 361 40.2
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 1.3e-49 201.1 326 42.0
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 1.3e-49 201.1 362 40.3
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 1.3e-49 201.1 360 43.1
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 1.7e-49 200.7 340 49.4
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 2.2e-49 200.3 346 41.3
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 6.5e-49 198.7 364 40.1
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 2.5e-48 196.8 337 40.9
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 2.5e-48 196.8 366 44.0
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 2.7e-47 193.4 365 39.5
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 2.7e-47 193.4 333 48.9
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 3.6e-47 193.0 333 39.3
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 6.1e-47 192.2 367 38.4
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 6.7e-46 188.7 360 41.4
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 4.4e-45 186.0 338 41.1
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 9.7e-45 184.9 341 49.6
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 1.3e-44 184.5 337 41.2
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 1.7e-44 184.1 347 37.5
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 1.7e-44 184.1 313 45.0
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 2.8e-44 183.3 323 45.2
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 3.7e-44 183.0 377 41.9
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 3.7e-44 183.0 342 42.7
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 8.2e-44 181.8 319 44.2
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.4e-43 180.3 332 42.8
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 4.1e-43 179.5 361 38.5
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.6e-42 177.6 298 43.6
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 2.6e-42 176.8 356 46.3
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 7.7e-42 175.3 328 41.5
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 2.2e-41 173.7 335 44.8
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 2.9e-41 173.3 356 41.9
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.9e-41 173.3 331 39.3
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 1.1e-40 171.4 312 40.7
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 7.2e-40 168.7 352 43.5
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 3.6e-39 166.4 365 36.2
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 1.0e-38 164.9 342 35.7
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.3e-38 163.7 350 42.9
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.3e-38 163.7 334 36.8
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 4.0e-38 162.9 337 42.4
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 5.2e-38 162.5 277 42.6
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 5.2e-38 162.5 341 44.0
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 1.2e-37 161.4 351 42.7
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 1.5e-37 161.0 294 44.9
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 2.0e-37 160.6 349 34.7
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 2.6e-37 160.2 354 38.4
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 4.4e-37 159.5 117 76.1
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 7.5e-37 158.7 269 40.9
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 2.2e-36 157.1 350 39.4
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 3.7e-36 156.4 339 36.6
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 3.7e-36 156.4 322 36.3
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 6.3e-36 155.6 345 37.1
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 4.1e-35 152.9 186 48.4
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.3e-35 152.5 333 41.1
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 5.3e-35 152.5 339 40.1
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 2.0e-34 150.6 340 33.5
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 3.2e-32 143.3 310 38.4
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 1.6e-31 141.0 349 37.5
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 2.1e-31 140.6 322 36.6
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 3.6e-31 139.8 359 33.7
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 8.0e-31 138.7 162 50.0
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 5.2e-30 136.0 301 37.9
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 2.8e-28 130.2 315 38.7
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 4.8e-28 129.4 292 39.7
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 6.3e-28 129.0 400 31.2
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 1.1e-27 128.3 332 37.7
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 5.4e-27 125.9 322 45.7
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 1.6e-26 124.4 415 30.8
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 7.7e-26 122.1 227 36.6
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 2.9e-25 120.2 330 34.8
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.5e-24 117.9 204 41.7
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 2.5e-24 117.1 295 42.7
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 4.2e-24 116.3 360 40.6
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 2.1e-23 114.0 335 32.8
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 4.0e-22 109.8 319 35.4
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.0e-21 107.5 317 38.2
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 3.7e-20 103.2 244 35.2
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 2.0e-18 97.4 334 43.1
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 2.3e-17 94.0 172 41.9
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 5.0e-17 92.8 352 39.2
BcaB03g11901 Brassica carinata HOM05D003923 ORTHO05D004553 8.0e-15 85.5 96 55.2
BcaC07g38451 Brassica carinata HOM05D003923 ORTHO05D004553 1.7e-09 67.8 90 46.7
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 1.1e-08 65.1 175 30.3
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 1.9e-08 64.3 203 31.0
Aqoxy4G00578 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.6e-07 61.2 125 36.0
Ah.04g162010 Amaranthus hybridus HOM05D004118 ORTHO05D004686 4.7e-07 59.7 115 35.7
FAN21G0508 Fragaria x ananassa HOM05D004118 ORTHO05D004686 8.0e-07 58.9 127 37.0
FAN25G0990 Fragaria x ananassa HOM05D004118 ORTHO05D004686 8.0e-07 58.9 127 36.2
Lsat_1_v5_gn_9_98421 Lactuca sativa HOM05D004118 ORTHO05D004686 8.0e-07 58.9 114 38.6
DCAR_017117 Daucus carota HOM05D004118 ORTHO05D004686 1.1e-06 58.5 102 40.2
FvH4_3g19150 Fragaria vesca HOM05D004118 ORTHO05D004686 1.8e-06 57.8 127 37.0
FAN11G3070 Fragaria x ananassa HOM05D004118 ORTHO05D004686 1.8e-06 57.8 127 37.0
FAN16G2866 Fragaria x ananassa HOM05D004118 ORTHO05D004686 2.3e-06 57.4 127 36.2
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 5.2e-06 56.2 155 38.1
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 8.9e-06 55.5 105 38.1


User provided reference genes

Program Settings