Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p21880 Brassica napus HOM05D000519 ORTHO05D023880 2.5e-107 392.1 196 100.0
A03p50950 Brassica napus HOM05D000519 ORTHO05D023880 2.0e-93 345.9 173 100.0
BraA02t07189Z Brassica rapa HOM05D000519 ORTHO05D023880 2.0e-93 345.9 173 100.0
BcaC07g36926 Brassica carinata HOM05D000519 ORTHO05D023880 8.0e-90 334.0 173 96.5
BolC3t18308H Brassica oleracea HOM05D000519 ORTHO05D023880 7.8e-53 211.1 148 78.4
BolC2t09434H Brassica oleracea HOM05D000519 ORTHO05D024099 1.1e-11 74.3 82 53.7
A05p36980 Brassica napus HOM05D000519 ORTHO05D001210 1.7e-10 70.5 85 49.4
C07p24550 Brassica napus HOM05D000519 ORTHO05D024099 2.8e-10 69.7 69 55.1
BolC7t42975H Brassica oleracea HOM05D000519 ORTHO05D024099 2.8e-10 69.7 69 55.1
BraA05t22497Z Brassica rapa HOM05D000519 ORTHO05D001210 2.8e-10 69.7 85 49.4
THA.LOC104799337 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 2.8e-10 69.7 84 47.6
Aa31sc1276G20 Aethionema arabicum HOM05D000519 ORTHO05D001210 3.7e-10 69.3 84 48.8
C05p55420 Brassica napus HOM05D000519 ORTHO05D001210 3.7e-10 69.3 86 48.8
BolC5t34208H Brassica oleracea HOM05D000519 ORTHO05D001210 3.7e-10 69.3 86 48.8
Sp3g10620 Schrenkiella parvula HOM05D000519 ORTHO05D001210 6.3e-10 68.6 85 48.2
BcaC05g29262 Brassica carinata HOM05D000519 ORTHO05D001210 8.2e-10 68.2 86 47.7
Thhalv10021442m.g Eutrema salsugineum HOM05D000519 ORTHO05D001210 1.1e-09 67.8 84 47.6
AT3G12490 Arabidopsis thaliana HOM05D000519 ORTHO05D001210 1.8e-09 67.0 69 55.1
CARHR086990 Cardamine hirsuta HOM05D000519 ORTHO05D001210 2.4e-09 66.6 84 47.6
BcaB06g25535 Brassica carinata HOM05D000519 ORTHO05D001210 3.1e-09 66.2 86 47.7
Cpa.g.sc228.9 Carica papaya HOM05D000519 ORTHO05D001210 4.1e-09 65.9 47 66.0
AL3G24120 Arabidopsis lyrata HOM05D000519 ORTHO05D001210 5.3e-09 65.5 85 47.1
BcaB04g21075 Brassica carinata HOM05D000519 ORTHO05D001210 5.3e-09 65.5 85 47.1
C01p52750 Brassica napus HOM05D000519 ORTHO05D001210 5.3e-09 65.5 49 67.3
BolC1t05212H Brassica oleracea HOM05D000519 ORTHO05D001210 5.3e-09 65.5 49 67.3
BraA01t04133Z Brassica rapa HOM05D000519 ORTHO05D001210 5.3e-09 65.5 49 67.3
Cc02_g00070 Coffea canephora HOM05D000519 ORTHO05D001210 5.3e-09 65.5 47 68.1
BcaC09g48245 Brassica carinata HOM05D000519 ORTHO05D001210 6.9e-09 65.1 45 73.3
Potri.003G192200 Populus trichocarpa HOM05D000519 ORTHO05D001210 6.9e-09 65.1 43 74.4
Aqoxy1G00058 Aquilegia oxysepala HOM05D000519 ORTHO05D001210 9.1e-09 64.7 48 66.7
CDE02G2182 Ceratophyllum demersum HOM05D000519 ORTHO05D001210 9.1e-09 64.7 83 45.8
QL04p021809 Quercus lobata HOM05D000519 ORTHO05D001210 9.1e-09 64.7 48 66.7
arahy.Tifrunner.gnm1.ann1.MLA72C Arachis hypogaea HOM05D000519 ORTHO05D001210 1.5e-08 63.9 44 68.2
arahy.Tifrunner.gnm1.ann1.ZL1DA1 Arachis hypogaea HOM05D000519 ORTHO05D001210 1.5e-08 63.9 44 68.2
AUR62031684 Chenopodium quinoa HOM05D000519 ORTHO05D001210 1.5e-08 63.9 48 64.6
AUR62032567 Chenopodium quinoa HOM05D000519 ORTHO05D001210 1.5e-08 63.9 48 64.6
Ca_24028_v3 Cicer arietinum L. HOM05D000519 ORTHO05D001210 1.5e-08 63.9 47 66.0
TAR633G0145 Trochodendron aralioides HOM05D000519 ORTHO05D001210 1.5e-08 63.9 47 66.0
GSVIVG01036582001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.5e-08 63.9 44 68.2
Carub.0003s1182 Capsella rubella HOM05D000519 ORTHO05D001210 2.0e-08 63.5 43 74.4
Ciclev10002346m.g Citrus clementina HOM05D000519 ORTHO05D001210 2.0e-08 63.5 48 66.7
COL.COLO4_21327 Corchorus olitorius HOM05D000519 ORTHO05D001210 2.0e-08 63.5 44 68.2
DCAR_031840 Daucus carota HOM05D000519 ORTHO05D001210 2.0e-08 63.5 44 68.2
Nitab4.5_0000021g0820 Nicotiana tabacum HOM05D000519 ORTHO05D001210 2.0e-08 63.5 47 66.0
Sabra07G0090200 Salix brachista HOM05D002004 ORTHO05D001210 2.0e-08 63.5 40 77.5
CSS0008725 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.6e-08 63.2 49 61.2
CSS0026186 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.6e-08 63.2 49 61.2
CSS0039548 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.6e-08 63.2 49 61.2
PSO384G4053 Papaver somniferum HOM05D000519 ORTHO05D001210 2.6e-08 63.2 49 65.3
TAR636G0712 Trochodendron aralioides HOM05D000519 ORTHO05D001210 2.6e-08 63.2 48 62.5
Duzib114G0410 Durio zibethinus HOM05D000519 ORTHO05D001210 3.4e-08 62.8 44 68.2
Oeu028986.1 Olea europaea HOM05D000519 ORTHO05D001210 3.4e-08 62.8 44 65.9
Hund13411 Selenicereus undatus HOM05D000519 ORTHO05D001210 3.4e-08 62.8 48 60.4
SGA_v2.0_scaffold18G08212 Striga asiatica HOM05D000519 ORTHO05D001210 3.4e-08 62.8 44 68.2
Actinidia18375 Actinidia chinensis HOM05D000519 ORTHO05D001210 4.5e-08 62.4 49 61.2
CiPaw.13G017000 Carya illinoinensis HOM05D000519 ORTHO05D001210 4.5e-08 62.4 44 65.9
DCAR_031843 Daucus carota HOM05D000519 ORTHO05D001210 4.5e-08 62.4 43 69.8
Dinv31994 Davidia involucrata HOM05D000519 ORTHO05D001210 4.5e-08 62.4 44 65.9
Lj7A492G19 Lonicera japonica HOM05D000519 ORTHO05D001210 4.5e-08 62.4 53 56.6
Medtr8g041410 Medicago truncatula HOM05D000519 ORTHO05D001210 4.5e-08 62.4 47 63.8
Nn2g14598 Nelumbo nucifera HOM05D000519 ORTHO05D001210 4.5e-08 62.4 41 75.6
Nitab4.5_0009278g0010 Nicotiana tabacum HOM05D000519 ORTHO05D001210 4.5e-08 62.4 44 68.2
Solyc03g097270.3 Solanum lycopersicum HOM05D000519 ORTHO05D001210 4.5e-08 62.4 42 71.4
PGSC0003DMG400026473 Solanum tuberosum HOM05D000519 ORTHO05D001210 4.5e-08 62.4 42 71.4
TWI38G1437 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 4.5e-08 62.4 48 64.6
Atru.chr12.1206 Acer truncatum HOM05D000519 ORTHO05D001210 5.9e-08 62.0 48 62.5
BolC2t09688H Brassica oleracea HOM05D000313 ORTHO05D022028 5.9e-08 62.0 43 72.1
CiPaw.14G010700 Carya illinoinensis HOM05D000519 ORTHO05D001210 5.9e-08 62.0 44 65.9
Duzib106G2054 Durio zibethinus HOM05D000519 ORTHO05D001210 5.9e-08 62.0 44 65.9
Glyma.13G189500 Glycine max HOM05D000519 ORTHO05D001210 5.9e-08 62.0 43 72.1
Glyma.15G227500 Glycine max HOM05D000519 ORTHO05D001210 5.9e-08 62.0 43 72.1
Nn7g36993 Nelumbo nucifera HOM05D000519 ORTHO05D001210 5.9e-08 62.0 43 69.8
Peaxi162Scf00516g00518 Petunia axillaris HOM05D000519 ORTHO05D001210 5.9e-08 62.0 44 68.2
THA.LOC104826741 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 5.9e-08 62.0 84 42.9
Thecc.10G138800 Theobroma cacao HOM05D000519 ORTHO05D001210 5.9e-08 62.0 44 65.9
TWI63G1775 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 5.9e-08 62.0 44 68.2
EL10Ac2g02716 Beta vulgaris HOM05D000519 ORTHO05D001210 7.7e-08 61.6 48 60.4
Gohir.A10G190300 Gossypium hirsutum HOM05D000519 ORTHO05D001210 7.7e-08 61.6 44 65.9
Gohir.D10G198100 Gossypium hirsutum HOM05D000519 ORTHO05D001210 7.7e-08 61.6 44 65.9
Gorai.011G221800 Gossypium raimondii HOM05D000519 ORTHO05D001210 7.7e-08 61.6 44 65.9
PSO339G0227 Papaver somniferum HOM05D000519 ORTHO05D001210 7.7e-08 61.6 49 63.3
Psat4g143880 Pisum sativum HOM05D000519 ORTHO05D001210 7.7e-08 61.6 44 65.9
vmacro13804 Vaccinium macrocarpon HOM05D000519 ORTHO05D001210 7.7e-08 61.6 48 62.5
Zm00001eb333010 Zea mays HOM05D000519 ORTHO05D001210 7.7e-08 61.6 69 49.3
Psat4g178520 Pisum sativum HOM05D000519 ORTHO05D001210 1.0e-07 61.2 56 55.4
Sc11g0006180 Simmondsia chinensis HOM05D000519 ORTHO05D001210 1.0e-07 61.2 44 63.6
Ah.10g029850 Amaranthus hybridus HOM05D000519 ORTHO05D001210 1.3e-07 60.8 48 58.3
ECA236G4990 Erigeron canadensis HOM05D000519 ORTHO05D001210 1.3e-07 60.8 44 65.9
Gohir.D06G183900 Gossypium hirsutum HOM05D000519 ORTHO05D001210 1.3e-07 60.8 44 65.9
Gorai.010G215300 Gossypium raimondii HOM05D000519 ORTHO05D001210 1.3e-07 60.8 44 65.9
QL07p013373 Quercus lobata HOM05D000519 ORTHO05D001210 1.3e-07 60.8 47 59.6
CANSAT56G1130 Cannabis sativa HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
CANSAT56G1974 Cannabis sativa HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
ClCG11G013050 Citrullus lanatus HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
MELO3C011798.2 Cucumis melo HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
CsaV3_5G029540 Cucumis sativus L. HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
Dinv02124 Davidia involucrata HOM05D000519 ORTHO05D001210 1.7e-07 60.5 48 60.4
Hma1.2p1_0233F.1_g098160 Hydrangea macrophylla HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 63.6
Phvul.011G196600 Phaseolus vulgaris HOM05D000519 ORTHO05D001210 1.7e-07 60.5 43 69.8
Potri.001G032900 Populus trichocarpa HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
PGR044G0162 Punica granatum HOM05D000519 ORTHO05D001210 1.7e-07 60.5 44 65.9
Sabra03G0143100 Salix brachista HOM05D000519 ORTHO05D001210 1.7e-07 60.5 43 67.4
Sopen03g028040 Solanum pennellii HOM05D000519 ORTHO05D001210 1.7e-07 60.5 42 69.0
CSS0046647 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.2e-07 60.1 48 58.3
Cfa010968 Carpinus fangiana HOM05D000519 ORTHO05D001210 2.2e-07 60.1 48 60.4
Haze_02970 Corylus avellana HOM05D000519 ORTHO05D001210 2.2e-07 60.1 48 60.4
Oeu027895.1 Olea europaea HOM05D000519 ORTHO05D001210 2.2e-07 60.1 44 63.6
Os01g0270100 Oryza sativa ssp. japonica HOM05D000519 ORTHO05D001210 2.2e-07 60.1 84 44.0
Rhsim07G0073300 Rhododendron simsii HOM05D000519 ORTHO05D001210 2.2e-07 60.1 48 60.4
HPP92_012548 Vanilla planifolia HOM05D000519 ORTHO05D001210 2.2e-07 60.1 44 65.9
Atru.chr1.1345 Acer truncatum HOM05D000519 ORTHO05D001210 2.9e-07 59.7 44 63.6
Atru.chr1.1350 Acer truncatum HOM05D000519 ORTHO05D001210 2.9e-07 59.7 44 63.6
C03p74340 Brassica napus HOM05D000313 ORTHO05D022028 2.9e-07 59.7 41 73.2
C07p21050 Brassica napus HOM05D000313 ORTHO05D022028 2.9e-07 59.7 41 73.2
BraA01t01597Z Brassica rapa HOM05D000313 ORTHO05D022028 2.9e-07 59.7 41 73.2
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 2.9e-07 59.7 42 66.7
Manes.04G155400 Manihot esculenta HOM05D000519 ORTHO05D001210 2.9e-07 59.7 44 65.9
Prupe.2G047100 Prunus persica HOM05D000519 ORTHO05D001210 2.9e-07 59.7 44 63.6
CDE08G1526 Ceratophyllum demersum HOM05D000519 ORTHO05D001210 3.8e-07 59.3 48 62.5
MD02G1275000 Malus domestica HOM05D000519 ORTHO05D001210 3.8e-07 59.3 47 59.6
Nn7g36997 Nelumbo nucifera HOM05D000519 ORTHO05D001210 3.8e-07 59.3 43 67.4
MSTRG.26921 Avicennia marina HOM05D000519 ORTHO05D001210 5.0e-07 58.9 43 67.4
BcaC03g15712 Brassica carinata HOM05D000519 ORTHO05D001210 5.0e-07 58.9 52 59.6
Manes.11G008702 Manihot esculenta HOM05D000519 ORTHO05D001210 5.0e-07 58.9 59 54.2
Nn4g25333 Nelumbo nucifera HOM05D000519 ORTHO05D001210 5.0e-07 58.9 43 67.4
Sabra01G0023500 Salix brachista HOM05D000519 ORTHO05D001210 5.0e-07 58.9 44 63.6
Sed0025076 Sechium edule HOM05D000519 ORTHO05D001210 5.0e-07 58.9 44 63.6
TPR.G16378 Trifolium pratense HOM05D000519 ORTHO05D001210 5.0e-07 58.9 56 53.6
TWI53G0432 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 5.0e-07 58.9 44 63.6
VMungo1127G0633 Vigna mungo HOM05D000519 ORTHO05D001210 5.0e-07 58.9 43 69.8
FvH4_7g04140 Fragaria vesca HOM05D000519 ORTHO05D001210 6.5e-07 58.5 47 59.6
FAN06G2804 Fragaria x ananassa HOM05D000519 ORTHO05D001210 6.5e-07 58.5 47 59.6
Gorai.010G215400 Gossypium raimondii HOM05D000519 ORTHO05D001210 6.5e-07 58.5 48 58.3
HanXRQChr13g0424331 Helianthus annuus HOM05D000519 ORTHO05D001210 6.5e-07 58.5 47 59.6
unitig_749.g14102 Utricularia gibba HOM05D000519 ORTHO05D001210 6.5e-07 58.5 44 63.6
C02p31340 Brassica napus HOM05D000313 ORTHO05D022028 8.5e-07 58.2 41 70.7
FAN03G2892 Fragaria x ananassa HOM05D000519 ORTHO05D001210 8.5e-07 58.2 44 61.4
Nn1g04295 Nelumbo nucifera HOM05D000519 ORTHO05D001210 8.5e-07 58.2 43 65.1
BcaC06g34798 Brassica carinata HOM05D000519 ORTHO05D024099 1.1e-06 57.8 43 65.1
Lj2A411T30 Lonicera japonica HOM05D000519 ORTHO05D001210 1.1e-06 57.8 44 61.4
Thecc.05G122600 Theobroma cacao HOM05D000519 ORTHO05D001210 1.1e-06 57.8 70 45.7
C09p46350 Brassica napus HOM05D015051 ORTHO05D000065 1.4e-06 57.4 41 68.3
Dinv14880 Davidia involucrata HOM05D000519 ORTHO05D001210 1.4e-06 57.4 48 54.2
Migut.H00005 Erythranthe guttata HOM05D000519 ORTHO05D001210 1.4e-06 57.4 44 61.4
Eucgr.A02187 Eucalyptus grandis HOM05D000519 ORTHO05D001210 1.4e-06 57.4 44 61.4
Eucgr.A02189 Eucalyptus grandis HOM05D000519 ORTHO05D001210 1.4e-06 57.4 44 61.4
Eucgr.J00085 Eucalyptus grandis HOM05D000519 ORTHO05D001210 1.4e-06 57.4 44 59.1
Gohir.A06G173900 Gossypium hirsutum HOM05D000519 ORTHO05D001210 1.4e-06 57.4 48 56.2
Carub.0006s0404 Capsella rubella HOM05D000519 ORTHO05D001210 1.9e-06 57.0 44 61.4
FAN01G0617 Fragaria x ananassa HOM05D000519 ORTHO05D001210 1.9e-06 57.0 44 59.1
FAN10G1451 Fragaria x ananassa HOM05D000519 ORTHO05D001210 1.9e-06 57.0 44 59.1
SHI24451 Sapria himalayana HOM05D000519 ORTHO05D001210 1.9e-06 57.0 43 65.1
GSVIVG01025801001 Vitis vinifera HOM05D000519 ORTHO05D001210 1.9e-06 57.0 48 56.2
Sabra01G0023400 Salix brachista HOM05D000519 ORTHO05D001210 2.5e-06 56.6 44 61.4
Cfa019958 Carpinus fangiana HOM05D000519 ORTHO05D001210 3.2e-06 56.2 44 59.1
Cc06_g20400 Coffea canephora HOM05D000519 ORTHO05D001210 3.2e-06 56.2 44 59.1
Haze_20276 Corylus avellana HOM05D000519 ORTHO05D001210 3.2e-06 56.2 44 59.1
Haze_20281 Corylus avellana HOM05D000519 ORTHO05D001210 3.2e-06 56.2 44 59.1
PGR042G2892 Punica granatum HOM05D000519 ORTHO05D001210 3.2e-06 56.2 51 52.9
SalBow1G7707 Salvia bowleyana HOM05D000519 ORTHO05D001210 3.2e-06 56.2 44 59.1
BcaNung03376 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-06 55.8 104 41.3
Ciclev10012693m.g Citrus clementina HOM05D000519 ORTHO05D001210 4.2e-06 55.8 44 56.8
Lsat_1_v5_gn_7_31141 Lactuca sativa HOM05D000519 ORTHO05D001210 4.2e-06 55.8 44 59.1
MD07G1043000 Malus domestica HOM05D000519 ORTHO05D001210 4.2e-06 55.8 47 59.6
Rhsim04G0117000 Rhododendron simsii HOM05D000519 ORTHO05D001210 4.2e-06 55.8 44 59.1
RcHm_v2.0_Chr1g0328231 Rosa chinensis HOM05D000519 ORTHO05D001210 4.2e-06 55.8 44 59.1
SEGI_04265 Sequoiadendron giganteum HOM05D000519 ORTHO05D001210 4.2e-06 55.8 43 65.1
TAR623G0619 Trochodendron aralioides HOM05D000519 ORTHO05D001210 4.2e-06 55.8 52 51.9
Atru.chr1.1313 Acer truncatum HOM05D000519 ORTHO05D001210 5.5e-06 55.5 44 59.1
Atru.chr1.1314 Acer truncatum HOM05D000519 ORTHO05D001210 5.5e-06 55.5 44 59.1
Actinidia38198 Actinidia chinensis HOM05D000519 ORTHO05D001210 5.5e-06 55.5 48 52.1
PSO063G7240 Papaver somniferum HOM05D000519 ORTHO05D001210 5.5e-06 55.5 49 57.1
BcaC05g25203 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-06 55.1 96 41.7
CiPaw.10G043600 Carya illinoinensis HOM05D000519 ORTHO05D001210 7.2e-06 55.1 48 52.1
LjContig00430g0007944 Lotus japonicus HOM05D000519 ORTHO05D001210 7.2e-06 55.1 43 62.8
MBI19_g39142_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D001210 7.2e-06 55.1 46 60.9
Nn4g24017 Nelumbo nucifera HOM05D000519 ORTHO05D001210 7.2e-06 55.1 40 65.0
Potri.006G033201 Populus trichocarpa HOM05D000519 ORTHO05D001210 7.2e-06 55.1 44 59.1
Rhsim04G0050100 Rhododendron simsii HOM05D000519 ORTHO05D001210 7.2e-06 55.1 48 54.2
vmacro09362 Vaccinium macrocarpon HOM05D000519 ORTHO05D001210 7.2e-06 55.1 48 54.2
MSTRG.19779 Avicennia marina HOM05D000519 ORTHO05D001210 9.4e-06 54.7 41 65.9
DCAR_013534 Daucus carota HOM05D000519 ORTHO05D001210 9.4e-06 54.7 43 60.5
HPP92_000745 Vanilla planifolia HOM05D000519 ORTHO05D001210 9.4e-06 54.7 44 59.1
HPP92_000771 Vanilla planifolia HOM05D000519 ORTHO05D001210 9.4e-06 54.7 44 59.1
HPP92_026796 Vanilla planifolia HOM05D000519 ORTHO05D001210 9.4e-06 54.7 44 59.1


User provided reference genes

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