Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p20410 Brassica napus HOM05D003173 ORTHO05D003546 1.1e-123 446.8 262 100.0
BraA02t07073Z Brassica rapa HOM05D003173 ORTHO05D003546 1.2e-120 436.8 262 93.9
BcaC03g15643 Brassica carinata HOM05D003173 ORTHO05D003546 5.4e-118 427.9 264 96.6
BolC2t09356H Brassica oleracea HOM05D003173 ORTHO05D003546 5.4e-118 427.9 264 96.6
C02p33480 Brassica napus HOM05D003173 ORTHO05D003546 3.5e-117 425.2 264 96.6
CARHR069610 Cardamine hirsuta HOM05D003173 ORTHO05D003546 3.2e-86 322.4 270 74.8
AT1G76070 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 1.6e-85 320.1 274 70.8
AL2G36110 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 2.1e-85 319.7 279 72.4
A07p41630 Brassica napus HOM05D003173 ORTHO05D003546 2.1e-85 319.7 269 77.3
BraA07t31692Z Brassica rapa HOM05D003173 ORTHO05D003546 2.7e-85 319.3 270 74.1
Sp5g31190 Schrenkiella parvula HOM05D003173 ORTHO05D003546 1.8e-84 316.6 275 72.4
BolC6t40040H Brassica oleracea HOM05D003173 ORTHO05D003546 3.0e-84 315.8 270 76.3
Thhalv10018992m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 2.6e-83 312.8 278 72.7
BcaC08g47100 Brassica carinata HOM05D003173 ORTHO05D003546 4.8e-82 308.5 272 70.6
Carub.0002s2296 Capsella rubella HOM05D003173 ORTHO05D003546 2.2e-79 299.7 275 65.1
BcaB05g24968 Brassica carinata HOM05D003173 ORTHO05D003546 6.5e-79 298.1 268 77.2
BcaC08g47302 Brassica carinata HOM05D003173 ORTHO05D003546 3.1e-65 252.7 270 65.6
C06p50010 Brassica napus HOM05D003173 ORTHO05D003546 2.0e-64 250.0 202 74.3
Aa31LG4G6190 Aethionema arabicum HOM05D003173 ORTHO05D003546 9.4e-62 241.1 287 61.0
Thhalv10009337m.g Eutrema salsugineum HOM05D003173 ORTHO05D003546 7.5e-43 178.3 255 48.2
THA.LOC104811444 Tarenaya hassleriana HOM05D003173 ORTHO05D003546 9.8e-43 177.9 271 43.9
BcaB07g32036 Brassica carinata HOM05D003173 ORTHO05D003546 2.4e-41 173.3 267 45.3
BolC7t42850H Brassica oleracea HOM05D003173 ORTHO05D003546 3.2e-41 172.9 259 46.3
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 2.0e-40 170.2 259 45.6
Carub.0001s1981 Capsella rubella HOM05D003173 ORTHO05D003546 3.5e-40 169.5 266 43.6
BcaNung03372 Brassica carinata HOM05D003173 ORTHO05D003546 1.0e-39 167.9 259 45.9
C07p23130 Brassica napus HOM05D003173 ORTHO05D003546 1.0e-39 167.9 259 45.9
AT1G20310 Arabidopsis thaliana HOM05D003173 ORTHO05D003546 3.0e-39 166.4 268 45.5
A07p15840 Brassica napus HOM05D003173 ORTHO05D003546 1.9e-38 163.7 258 45.7
BraA07t29310Z Brassica rapa HOM05D003173 ORTHO05D003546 1.9e-38 163.7 258 45.7
AL1G33140 Arabidopsis lyrata HOM05D003173 ORTHO05D003546 4.3e-38 162.5 254 44.9
BolC5t30588H Brassica oleracea HOM05D003173 ORTHO05D003546 7.3e-38 161.8 261 44.4
BcaC05g25935 Brassica carinata HOM05D003173 ORTHO05D003546 1.6e-37 160.6 261 43.7
C05p18890 Brassica napus HOM05D003173 ORTHO05D003546 1.6e-37 160.6 261 43.7
BraA06t24743Z Brassica rapa HOM05D003173 ORTHO05D003546 2.1e-37 160.2 262 43.1
A06p16390 Brassica napus HOM05D003173 ORTHO05D003546 6.2e-37 158.7 262 42.7
A07p15740 Brassica napus HOM05D003173 ORTHO05D003546 7.5e-35 151.8 238 45.4
CARHR020790 Cardamine hirsuta HOM05D003173 ORTHO05D003546 3.7e-34 149.4 261 44.4
BcaB03g14324 Brassica carinata HOM05D003173 ORTHO05D003546 3.0e-31 139.8 258 39.9
BcaC08g47295 Brassica carinata HOM05D003173 ORTHO05D003546 9.5e-30 134.8 133 66.2
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 2.8e-29 133.3 265 39.2
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 4.7e-29 132.5 264 37.5
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 8.9e-28 128.3 262 38.2
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 8.9e-28 128.3 265 37.7
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 2.6e-27 126.7 265 38.1
Aa31LG7G4670 Aethionema arabicum HOM05D003173 ORTHO05D003546 4.4e-27 125.9 191 45.0
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 1.3e-26 124.4 262 34.7
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.7e-26 122.9 258 34.5
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.4e-25 120.9 263 37.6
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 1.4e-25 120.9 261 36.8
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.4e-25 120.2 263 44.1
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.4e-25 120.2 263 37.3
Phvul.001G002200 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 9.2e-25 118.2 263 36.1
Solyc04g081960.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 1.6e-24 117.5 264 36.4
VMungo0647G1822 Vigna mungo HOM05D003173 ORTHO05D003546 3.5e-24 116.3 260 33.8
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 1.3e-23 114.4 257 42.8
Sopen04g035610 Solanum pennellii HOM05D003173 ORTHO05D003546 1.3e-23 114.4 264 38.3
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 2.3e-23 113.6 272 34.9
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 3.9e-23 112.8 268 32.8
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 5.1e-23 112.5 254 36.2
Peaxi162Scf00744g00026 Petunia axillaris HOM05D003173 ORTHO05D003546 1.1e-22 111.3 256 34.8
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.1e-22 111.3 277 32.5
Ca_13485_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 1.5e-22 110.9 265 32.8
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.5e-22 110.9 262 33.2
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 1.5e-22 110.9 265 33.6
PGSC0003DMG400009955 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.9e-22 110.5 268 38.1
Oeu051144.1 Olea europaea HOM05D003173 ORTHO05D003546 2.5e-22 110.2 273 33.0
arahy.Tifrunner.gnm1.ann1.S3QWAM Arachis hypogaea HOM05D003173 ORTHO05D003546 3.3e-22 109.8 293 32.4
arahy.Tifrunner.gnm1.ann1.WLLD0D Arachis hypogaea HOM05D003173 ORTHO05D003546 3.3e-22 109.8 274 41.6
arahy.Tifrunner.gnm1.ann1.YK013F Arachis hypogaea HOM05D003173 ORTHO05D003546 3.3e-22 109.8 293 31.7
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 3.3e-22 109.8 258 33.3
Peaxi162Scf00174g00083 Petunia axillaris HOM05D003173 ORTHO05D003546 3.3e-22 109.8 256 34.8
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 5.6e-22 109.0 262 32.8
TWI56G0288 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 5.6e-22 109.0 262 33.6
Lalb_Chr19g0131611 Lupinus albus HOM05D003173 ORTHO05D003546 7.3e-22 108.6 293 31.4
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 9.6e-22 108.2 262 32.8
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 1.6e-21 107.5 254 39.4
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 2.1e-21 107.1 265 37.0
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.1e-21 107.1 271 35.8
TWI12G1263 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 2.1e-21 107.1 260 31.9
Atru.chr13.216 Acer truncatum HOM05D003173 ORTHO05D003546 4.7e-21 105.9 295 36.3
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 4.7e-21 105.9 256 32.4
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 4.7e-21 105.9 267 33.0
Ciclev10002153m.g Citrus clementina HOM05D003173 ORTHO05D003546 1.1e-20 104.8 274 32.8
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 1.1e-20 104.8 267 32.6
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.1e-20 104.8 273 31.9
PGR031G0086 Punica granatum HOM05D003173 ORTHO05D003546 1.8e-20 104.0 293 33.1
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 2.4e-20 103.6 261 36.0
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 3.1e-20 103.2 267 36.7
Cc10_g01130 Coffea canephora HOM05D003173 ORTHO05D003546 3.1e-20 103.2 276 40.9
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 4.0e-20 102.8 264 35.2
TPR.G38194 Trifolium pratense HOM05D003173 ORTHO05D003546 4.0e-20 102.8 256 35.9
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.0e-20 102.8 255 36.5
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 6.8e-20 102.1 273 32.2
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 6.8e-20 102.1 272 34.6
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 8.9e-20 101.7 293 38.9
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.2e-19 101.3 261 35.2
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 2.6e-19 100.1 260 31.2
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 3.4e-19 99.8 263 32.3
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 7.6e-19 98.6 269 37.5
Glyma.04G020700 Glycine max HOM05D003173 ORTHO05D003546 7.6e-19 98.6 279 29.7
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 9.9e-19 98.2 251 33.9
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 9.9e-19 98.2 261 34.9
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 1.3e-18 97.8 279 30.5
Sc15g0004670 Simmondsia chinensis HOM05D003173 ORTHO05D003546 2.9e-18 96.7 264 36.0
DCAR_016740 Daucus carota HOM05D000228 ORTHO05D001545 4.9e-18 95.9 298 30.9
Lalb_Chr23g0265991 Lupinus albus HOM05D003173 ORTHO05D003546 8.4e-18 95.1 257 31.5
Nn5g30846 Nelumbo nucifera HOM05D003173 ORTHO05D003546 1.1e-17 94.7 257 30.0
Psat5g012200 Pisum sativum HOM05D003173 ORTHO05D003546 1.1e-17 94.7 257 34.6
vmacro04379 Vaccinium macrocarpon HOM05D003173 ORTHO05D003546 3.2e-17 93.2 265 32.1
Nitab4.5_0003030g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 7.1e-17 92.0 181 42.5
TPR.G26427 Trifolium pratense HOM05D003173 ORTHO05D003546 1.2e-16 91.3 266 30.8
BcaC08g47296 Brassica carinata HOM05D003173 ORTHO05D003546 1.6e-16 90.9 66 74.2
Dinv31893 Davidia involucrata HOM05D003173 ORTHO05D003546 3.5e-16 89.7 257 33.5
Lalb_Chr03g0033561 Lupinus albus HOM05D003173 ORTHO05D003546 3.5e-16 89.7 296 32.4
Nitab4.5_0002353g0090 Nicotiana tabacum HOM05D003173 ORTHO05D003546 4.6e-16 89.4 256 31.2
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.0e-15 88.2 265 33.2
CANSAT25G2829 Cannabis sativa HOM05D003173 ORTHO05D003546 1.0e-15 88.2 283 30.7
CSS0006148 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.7e-15 87.4 261 31.0
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 1.7e-15 87.4 265 33.2
Sopen12g031280 Solanum pennellii HOM05D003173 ORTHO05D003546 3.0e-15 86.7 262 36.3
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 3.9e-15 86.3 249 30.5
Nitab4.5_0000498g0080 Nicotiana tabacum HOM05D003173 ORTHO05D003546 5.1e-15 85.9 249 29.3
PSO675G7160 Papaver somniferum HOM05D003173 ORTHO05D003546 5.1e-15 85.9 282 32.3
Lalb_Chr08g0246301 Lupinus albus HOM05D003173 ORTHO05D003546 6.6e-15 85.5 207 30.9
Solyc12g094390.1 Solanum lycopersicum HOM05D003173 ORTHO05D003546 6.6e-15 85.5 262 34.7
Sabra05G0189700 Salix brachista HOM05D003173 ORTHO05D003546 8.7e-15 85.1 262 32.1
Lsat_1_v5_gn_8_29221 Lactuca sativa HOM05D003173 ORTHO05D003546 1.1e-14 84.7 303 28.7
SGA_v2.0_scaffold19G08585 Striga asiatica HOM05D003173 ORTHO05D003546 4.3e-14 82.8 262 33.2
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 5.6e-14 82.4 250 30.4
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.3e-14 82.0 275 32.4
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 9.6e-14 81.6 262 31.3
Peaxi162Scf00064g00081 Petunia axillaris HOM05D003173 ORTHO05D003546 1.3e-13 81.3 254 31.9
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 1.3e-13 81.3 270 30.0
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 1.6e-13 80.9 272 32.0
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 2.1e-13 80.5 274 30.7
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.6e-13 79.7 274 31.4
Lsat_1_v5_gn_2_6961 Lactuca sativa HOM05D003173 ORTHO05D003546 3.6e-13 79.7 289 28.7
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 3.6e-13 79.7 272 35.3
ECA238G0569 Erigeron canadensis HOM05D000315 ORTHO05D000527 6.2e-13 79.0 271 27.7
ATR0661G366 Amborella trichopoda HOM05D003173 ORTHO05D003546 8.1e-13 78.6 250 28.8
ECA233G2815 Erigeron canadensis HOM05D003173 ORTHO05D003546 8.1e-13 78.6 280 27.1
SalBow7G1496 Salvia bowleyana HOM05D003173 ORTHO05D003546 8.1e-13 78.6 254 29.9
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.4e-12 77.8 274 30.3
PGSC0003DMG400029419 Solanum tuberosum HOM05D003173 ORTHO05D003546 1.4e-12 77.8 260 34.2
HanXRQChr14g0428491 Helianthus annuus HOM05D003173 ORTHO05D003546 1.8e-12 77.4 266 28.9
Lalb_Chr01g0008491 Lupinus albus HOM05D003173 ORTHO05D003546 1.8e-12 77.4 209 34.9
Migut.C00894 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.4e-12 77.0 263 31.2
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 3.1e-12 76.6 265 29.8
Hma1.2p1_0023F.1_g015790 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 9.0e-12 75.1 254 30.7
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 1.5e-11 74.3 178 34.8
Lj5g0013533 Lotus japonicus HOM05D003173 ORTHO05D003546 1.5e-11 74.3 266 27.1
BcaB01g00240 Brassica carinata HOM05D003173 ORTHO05D003546 4.4e-11 72.8 155 40.6
CAN.G401.21 Capsicum annuum HOM05D003173 ORTHO05D003546 4.4e-11 72.8 261 34.5
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 5.8e-11 72.4 181 33.7
HPP92_002481 Vanilla planifolia HOM05D003173 ORTHO05D003546 1.3e-10 71.2 281 28.1
SHI08021 Sapria himalayana HOM05D003173 ORTHO05D003546 2.9e-10 70.1 235 28.5
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 6.4e-10 68.9 260 30.8
SHI05037 Sapria himalayana HOM05D003173 ORTHO05D003546 1.1e-09 68.2 235 28.5
unitig_748.g7605 Utricularia gibba HOM05D003173 ORTHO05D003546 1.9e-09 67.4 226 28.8
CDE05G2702 Ceratophyllum demersum HOM05D003173 ORTHO05D003546 4.2e-09 66.2 243 30.5
SHI13075 Sapria himalayana HOM05D003173 ORTHO05D003546 4.2e-09 66.2 235 28.1
GSVIVG01008738001 Vitis vinifera HOM05D003173 ORTHO05D003546 9.3e-09 65.1 180 34.4
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 1.2e-08 64.7 248 28.6
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 1.6e-08 64.3 214 31.3
Hma1.2p1_1598F.1_g292960 Hydrangea macrophylla HOM05D003173 ORTHO05D003546 2.1e-08 63.9 190 32.6
Oeu057579.1 Olea europaea HOM05D003173 ORTHO05D003546 2.1e-08 63.9 271 27.7
Oeu039861.1 Olea europaea HOM05D003173 ORTHO05D003546 7.8e-08 62.0 271 28.0
DCAR_025088 Daucus carota HOM05D003173 ORTHO05D003546 1.3e-07 61.2 270 29.3
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 1.3e-07 61.2 172 32.0
unitig_32.g11393 Utricularia gibba HOM05D002221 ORTHO05D002626 1.3e-07 61.2 210 30.0
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 3.0e-07 60.1 177 36.2
Zm00001eb103980 Zea mays HOM05D003173 ORTHO05D003546 3.0e-07 60.1 250 30.0
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 3.9e-07 59.7 172 31.4
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 5.1e-07 59.3 173 34.7
Ca_15466_v3 Cicer arietinum L. HOM05D003173 ORTHO05D003546 6.6e-07 58.9 102 44.1
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 6.6e-07 58.9 179 33.0
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 8.7e-07 58.5 178 33.1
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 8.7e-07 58.5 178 33.1
Sed0006911 Sechium edule HOM05D003173 ORTHO05D003546 1.1e-06 58.2 249 26.5
Ah.00g000650 Amaranthus hybridus HOM05D003173 ORTHO05D003546 1.5e-06 57.8 106 50.9
DCAR_009512 Daucus carota HOM05D003173 ORTHO05D003546 1.5e-06 57.8 263 26.6
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 1.9e-06 57.4 177 30.5
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 1.9e-06 57.4 172 32.0
Zm00001eb331720 Zea mays HOM05D003173 ORTHO05D003546 2.5e-06 57.0 155 35.5


User provided reference genes

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