Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 8.7e-68 260.4 151 100.0
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.1e-66 255.8 151 98.7
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 7.6e-64 247.3 146 98.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 4.9e-63 244.6 146 97.9
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.2e-62 241.9 145 97.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 4.2e-54 214.9 156 85.9
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.7e-53 212.2 151 85.4
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 3.5e-53 211.8 157 84.7
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 6.0e-53 211.1 148 85.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 7.9e-53 210.7 152 86.2
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 7.9e-53 210.7 151 86.1
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.3e-52 209.1 148 85.1
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.3e-52 209.1 152 85.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.1e-51 206.8 146 87.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.5e-51 206.5 152 84.9
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 6.2e-50 201.1 149 83.2
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.5e-48 196.4 152 80.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.4e-46 189.9 156 76.3
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 9.6e-43 177.2 142 69.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 9.0e-41 170.6 144 73.6
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.6e-40 169.1 146 73.3
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 4.5e-40 168.3 149 71.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.3e-39 166.8 144 72.9
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 8.5e-39 164.1 145 72.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.5e-39 164.1 149 71.8
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 8.5e-39 164.1 147 69.4
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.1e-38 163.7 138 76.8
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.1e-38 163.7 144 72.2
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.4e-38 163.3 152 67.8
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 2.5e-38 162.5 144 71.5
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 2.5e-38 162.5 143 72.7
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 4.2e-38 161.8 148 67.6
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 4.2e-38 161.8 146 73.3
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 4.2e-38 161.8 146 71.9
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 5.5e-38 161.4 148 71.6
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 7.2e-38 161.0 150 70.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 7.2e-38 161.0 145 71.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 9.3e-38 160.6 149 71.1
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 9.3e-38 160.6 148 70.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 9.3e-38 160.6 148 68.9
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.2e-37 160.2 148 70.3
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.6e-37 159.8 148 69.6
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.6e-37 159.8 148 70.3
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.1e-37 159.5 143 70.6
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 2.1e-37 159.5 144 70.1
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.7e-37 159.1 147 68.7
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.7e-37 159.1 140 72.1
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 2.7e-37 159.1 144 70.8
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.7e-37 159.1 145 71.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 6.1e-37 157.9 141 70.9
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 6.1e-37 157.9 150 70.0
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 7.9e-37 157.5 149 70.5
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.8e-36 156.4 140 71.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.3e-36 156.0 152 65.1
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 2.3e-36 156.0 148 68.2
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 3.9e-36 155.2 155 67.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.9e-36 155.2 154 68.2
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.9e-36 155.2 153 67.3
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 3.9e-36 155.2 147 67.3
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 5.1e-36 154.8 140 70.0
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 6.7e-36 154.5 143 67.1
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 6.7e-36 154.5 143 68.5
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 6.7e-36 154.5 143 68.5
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.7e-36 154.5 154 67.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 8.7e-36 154.1 146 69.9
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.1e-35 153.7 151 66.9
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.1e-35 153.7 142 72.5
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.1e-35 153.7 149 68.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.1e-35 153.7 143 68.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 2.5e-35 152.5 151 64.2
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 3.3e-35 152.1 155 65.8
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 4.3e-35 151.8 136 67.6
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.3e-35 151.8 149 65.8
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.4e-35 151.0 143 67.1
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 9.7e-35 150.6 146 67.1
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 3.7e-34 148.7 156 63.5
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.7e-34 148.7 155 65.2
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 3.7e-34 148.7 151 65.6
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 4.8e-34 148.3 144 68.8
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.8e-33 146.4 157 65.6
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.4e-33 146.0 138 70.3
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.4e-32 142.1 184 56.5
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 5.9e-32 141.4 113 63.7
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.7e-31 139.8 178 46.1
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 2.2e-31 139.4 149 65.8
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.0e-31 138.3 185 56.8
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 5.0e-31 138.3 137 67.9
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.4e-30 136.7 111 76.6
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.1e-29 131.3 104 73.1
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.4e-28 130.2 104 74.0
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.3e-28 129.4 137 59.1
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.9e-28 128.6 109 71.6
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.4e-25 119.4 150 63.3
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.1e-25 119.0 104 69.2
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 7.7e-24 114.4 68 76.5
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.1e-22 110.5 98 61.2
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.9e-22 109.8 121 57.0
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 3.2e-22 109.0 120 60.0
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 5.5e-22 108.2 145 47.6
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.6e-21 106.7 158 43.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 2.7e-21 105.9 182 40.1
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.3e-18 97.1 85 62.4
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 7.7e-16 87.8 87 51.7
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.0e-12 75.9 136 38.2
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 9.7e-11 70.9 55 63.6
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 2.0e-08 63.2 96 38.5
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 4.5e-08 62.0 94 43.6
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 8.5e-07 57.8 53 50.9


User provided reference genes

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