Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p19800 Brassica napus HOM05D000219 ORTHO05D017689 1.3e-51 206.1 104 100.0
A07p24800 Brassica napus HOM05D000219 ORTHO05D017689 1.5e-50 202.6 104 99.0
BraA03t15335Z Brassica rapa HOM05D000219 ORTHO05D017689 1.5e-50 202.6 104 99.0
C09p23930 Brassica napus HOM05D000219 ORTHO05D017689 4.9e-46 187.6 104 93.3
C07p22140 Brassica napus HOM05D000219 ORTHO05D017689 6.9e-32 140.6 80 87.5
BolC7t42785H Brassica oleracea HOM05D000219 ORTHO05D017689 6.9e-32 140.6 80 87.5
C03p59850 Brassica napus HOM05D000219 ORTHO05D017689 8.4e-30 133.7 73 91.8
A06p33720 Brassica napus HOM05D000219 ORTHO05D097765 5.5e-21 104.4 75 74.7
C03p55660 Brassica napus HOM05D000219 ORTHO05D017689 3.1e-16 88.6 42 97.6
BolC3t17843H Brassica oleracea HOM05D000219 ORTHO05D017689 3.1e-16 88.6 42 97.6
A04p08950 Brassica napus HOM05D000219 ORTHO05D101342 6.9e-16 87.4 41 97.6
AT2G31580 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.5e-15 86.3 73 67.1
A03p17780 Brassica napus HOM05D000219 ORTHO05D004649 2.6e-15 85.5 73 65.8
Carub.0004s1289 Capsella rubella HOM05D000219 ORTHO05D004649 2.6e-15 85.5 73 67.1
CARHR008820 Cardamine hirsuta HOM05D000219 ORTHO05D004649 3.4e-15 85.1 73 67.1
Sp4g14010 Schrenkiella parvula HOM05D000219 ORTHO05D004649 3.4e-15 85.1 73 65.8
A05p13880 Brassica napus HOM05D000219 ORTHO05D004649 5.9e-15 84.3 73 65.8
BraA05t20324Z Brassica rapa HOM05D000219 ORTHO05D004649 5.9e-15 84.3 73 65.8
Carub.0004s1193 Capsella rubella HOM05D000219 ORTHO05D004649 2.9e-14 82.0 73 63.0
AL4G26840 Arabidopsis lyrata HOM05D000219 ORTHO05D004649 3.8e-14 81.6 73 63.0
C04p18270 Brassica napus HOM05D000219 ORTHO05D004649 3.8e-14 81.6 73 63.0
BolC4t23384H Brassica oleracea HOM05D000219 ORTHO05D004649 3.8e-14 81.6 73 63.0
BcaB02g10403 Brassica carinata HOM05D000219 ORTHO05D004649 5.0e-14 81.3 73 63.0
C03p20860 Brassica napus HOM05D000219 ORTHO05D004649 5.0e-14 81.3 73 61.6
BolC3t14438H Brassica oleracea HOM05D000219 ORTHO05D004649 5.0e-14 81.3 73 61.6
THA.LOC104800903 Tarenaya hassleriana HOM05D000219 ORTHO05D004649 5.0e-14 81.3 75 60.0
Aa31LG5G4650 Aethionema arabicum HOM05D000219 ORTHO05D004649 6.5e-14 80.9 73 63.0
BcaC02g11270 Brassica carinata HOM05D000219 ORTHO05D004649 1.1e-13 80.1 73 61.6
Carub.0004s1368 Capsella rubella HOM05D000219 ORTHO05D004649 1.1e-13 80.1 73 61.6
Thhalv10016524m.g Eutrema salsugineum HOM05D000219 ORTHO05D004649 1.4e-13 79.7 73 61.6
AT2G32320 Arabidopsis thaliana HOM05D000219 ORTHO05D004649 1.9e-13 79.3 73 63.0
BraA03t11042Z Brassica rapa HOM05D000219 ORTHO05D004649 1.9e-13 79.3 73 61.6
Ciclev10027573m.g Citrus clementina HOM05D000219 ORTHO05D004649 7.2e-13 77.4 73 57.5
CsaV3_6G042230 Cucumis sativus L. HOM05D000219 ORTHO05D004649 7.2e-13 77.4 73 56.2
Sed0023684 Sechium edule HOM05D000219 ORTHO05D004649 7.2e-13 77.4 73 54.8
Potri.002G233300 Populus trichocarpa HOM05D000219 ORTHO05D004649 7.9e-12 73.9 73 50.7
Actinidia39311 Actinidia chinensis HOM05D000219 ORTHO05D004649 1.0e-11 73.6 73 54.8
Oeu035604.1 Olea europaea HOM05D000219 ORTHO05D004649 1.0e-11 73.6 73 53.4
Atru.chr10.1005 Acer truncatum HOM05D000219 ORTHO05D004649 1.4e-11 73.2 73 52.1
QL06p031679 Quercus lobata HOM05D000219 ORTHO05D004649 1.4e-11 73.2 73 52.1
Sabra02G0178000 Salix brachista HOM05D000219 ORTHO05D004649 1.4e-11 73.2 70 51.4
Dinv19467 Davidia involucrata HOM05D000219 ORTHO05D004649 2.3e-11 72.4 73 53.4
Manes.11G020000 Manihot esculenta HOM05D000219 ORTHO05D004649 2.3e-11 72.4 75 49.3
GSVIVG01022253001 Vitis vinifera HOM05D000219 ORTHO05D004649 2.3e-11 72.4 73 53.4
CiPaw.15G021800 Carya illinoinensis HOM05D000219 ORTHO05D004649 3.0e-11 72.0 73 52.1
Eucgr.H04885 Eucalyptus grandis HOM05D000219 ORTHO05D004649 5.1e-11 71.2 73 52.1
Lj8A365T11 Lonicera japonica HOM05D000219 ORTHO05D004649 5.1e-11 71.2 75 48.0
Prupe.1G573900 Prunus persica HOM05D000219 ORTHO05D004649 5.1e-11 71.2 75 49.3
TWI79G1233 Tripterygium wilfordii HOM05D000219 ORTHO05D004649 5.1e-11 71.2 73 49.3
Haze_08455 Corylus avellana HOM05D000219 ORTHO05D004649 6.7e-11 70.9 73 52.1
Duzib235G0760 Durio zibethinus HOM05D000219 ORTHO05D004649 6.7e-11 70.9 73 52.1
Gorai.009G178600 Gossypium raimondii HOM05D000219 ORTHO05D004649 6.7e-11 70.9 73 53.4
SGA_v2.0_scaffold2G01286 Striga asiatica HOM05D000219 ORTHO05D004649 6.7e-11 70.9 73 50.7
CSS0031787 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D004649 8.8e-11 70.5 73 53.4
COL.COLO4_17688 Corchorus olitorius HOM05D000219 ORTHO05D004649 8.8e-11 70.5 73 50.7
Gohir.A05G170300 Gossypium hirsutum HOM05D000219 ORTHO05D004649 8.8e-11 70.5 73 52.1
Gohir.D05G173400 Gossypium hirsutum HOM05D000219 ORTHO05D004649 8.8e-11 70.5 73 52.1
Cfa002771 Carpinus fangiana HOM05D000219 ORTHO05D004649 1.1e-10 70.1 73 52.1
FAN20G1304 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.1e-10 70.1 73 49.3
TAR628G0592 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.1e-10 70.1 73 50.7
Migut.B00934 Erythranthe guttata HOM05D000219 ORTHO05D004649 1.5e-10 69.7 73 53.4
FvH4_2g15830 Fragaria vesca HOM05D000219 ORTHO05D004649 1.5e-10 69.7 75 48.0
FAN24G0946 Fragaria x ananassa HOM05D000219 ORTHO05D004649 1.5e-10 69.7 75 48.0
Thecc.06G220500 Theobroma cacao HOM05D000219 ORTHO05D004649 1.5e-10 69.7 73 52.1
Oeu027201.4 Olea europaea HOM05D000219 ORTHO05D004649 2.0e-10 69.3 73 49.3
CANSAT01G1436 Cannabis sativa HOM05D000219 ORTHO05D004649 2.5e-10 68.9 82 51.2
Hma1.2p1_0975F.1_g243180 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 2.5e-10 68.9 75 49.3
CANSAT64G2196 Cannabis sativa HOM05D000219 ORTHO05D004649 3.3e-10 68.6 73 53.4
FAN15G1293 Fragaria x ananassa HOM05D000219 ORTHO05D004649 4.3e-10 68.2 75 48.0
MSTRG.2524 Avicennia marina HOM05D000219 ORTHO05D004649 5.7e-10 67.8 75 49.3
FvH4_1g22971 Fragaria vesca HOM05D000219 ORTHO05D004649 5.7e-10 67.8 75 46.7
FAN23G1549 Fragaria x ananassa HOM05D000219 ORTHO05D004649 5.7e-10 67.8 75 46.7
FAN26G0146 Fragaria x ananassa HOM05D000219 ORTHO05D004649 5.7e-10 67.8 75 46.7
GSVIVG01006301001 Vitis vinifera HOM05D000026 ORTHO05D000127 5.7e-10 67.8 75 48.0
FAN27G2048 Fragaria x ananassa HOM05D000219 ORTHO05D004649 7.4e-10 67.4 75 46.7
Hma1.2p1_0252F.1_g102800 Hydrangea macrophylla HOM05D000219 ORTHO05D004649 7.4e-10 67.4 73 49.3
Peaxi162Scf00106g01118 Petunia axillaris HOM05D000219 ORTHO05D004649 7.4e-10 67.4 75 48.0
MD05G1030700 Malus domestica HOM05D000219 ORTHO05D004649 1.3e-09 66.6 75 46.7
TAR625G1522 Trochodendron aralioides HOM05D000219 ORTHO05D004649 1.3e-09 66.6 73 50.7
Haze_25064 Corylus avellana HOM05D000219 ORTHO05D004649 1.7e-09 66.2 73 49.3
Rhsim10G0148200 Rhododendron simsii HOM05D000219 ORTHO05D004649 1.7e-09 66.2 73 50.7
HanXRQChr10g0311141 Helianthus annuus HOM05D000219 ORTHO05D004649 2.2e-09 65.9 75 45.3
Atru.chr10.1697 Acer truncatum HOM05D000219 ORTHO05D004649 2.8e-09 65.5 73 50.7
arahy.Tifrunner.gnm1.ann1.M2QW19 Arachis hypogaea HOM05D000219 ORTHO05D004649 2.8e-09 65.5 71 45.1
arahy.Tifrunner.gnm1.ann1.V7J6Z4 Arachis hypogaea HOM05D000219 ORTHO05D004649 2.8e-09 65.5 71 45.1
CAN.G1235.19 Capsicum annuum HOM05D000219 ORTHO05D004649 2.8e-09 65.5 73 46.6
ECA234G1541 Erigeron canadensis HOM05D000219 ORTHO05D004649 2.8e-09 65.5 75 44.0
Lj5g0005884 Lotus japonicus HOM05D000219 ORTHO05D004649 3.7e-09 65.1 71 46.5
Lj6g0002222 Lotus japonicus HOM05D000219 ORTHO05D004649 3.7e-09 65.1 71 43.7
unitig_899.g14613 Utricularia gibba HOM05D000219 ORTHO05D004649 4.8e-09 64.7 73 47.9
COL.COLO4_16836 Corchorus olitorius HOM05D000219 ORTHO05D004649 6.3e-09 64.3 82 47.6
MBI05_g03455_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 6.3e-09 64.3 73 47.9
Ca_09426_v3 Cicer arietinum L. HOM05D000219 ORTHO05D004649 8.2e-09 63.9 71 42.3
Cc07_g16490 Coffea canephora HOM05D000219 ORTHO05D004649 8.2e-09 63.9 73 46.6
HPP92_021547 Vanilla planifolia HOM05D000219 ORTHO05D004649 8.2e-09 63.9 73 45.2
Glyma.16G091600 Glycine max HOM05D000219 ORTHO05D004649 1.1e-08 63.5 71 42.3
Glyma.16G117633 Glycine max HOM05D000219 ORTHO05D004649 1.1e-08 63.5 71 42.3
SalBow6G5746 Salvia bowleyana HOM05D000219 ORTHO05D004649 1.1e-08 63.5 73 45.2
Lalb_Chr11g0075091 Lupinus albus HOM05D000219 ORTHO05D004649 1.4e-08 63.2 71 42.3
Psat7g054840 Pisum sativum HOM05D000219 ORTHO05D004649 2.4e-08 62.4 71 42.3
Hund21266 Selenicereus undatus HOM05D000219 ORTHO05D004649 2.4e-08 62.4 73 46.6
Glyma.10G001600 Glycine max HOM05D000219 ORTHO05D004649 4.1e-08 61.6 71 40.8
Phvul.010G125700 Phaseolus vulgaris HOM05D000219 ORTHO05D004649 4.1e-08 61.6 69 43.5
RcHm_v2.0_Chr6g0279211 Rosa chinensis HOM05D000219 ORTHO05D004649 4.1e-08 61.6 75 44.0
TPR.G6992 Trifolium pratense HOM05D000219 ORTHO05D004649 4.1e-08 61.6 71 42.3
VMungo0720G2488 Vigna mungo HOM05D000219 ORTHO05D004649 4.1e-08 61.6 69 43.5
AUR62013249 Chenopodium quinoa HOM05D000219 ORTHO05D004649 5.3e-08 61.2 73 45.2
Medtr7g115250 Medicago truncatula HOM05D000219 ORTHO05D004649 5.3e-08 61.2 71 40.8
Solyc04g051600.4 Solanum lycopersicum HOM05D000219 ORTHO05D004649 5.3e-08 61.2 79 44.3
Aqoxy3G01228 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 6.9e-08 60.8 73 47.9
TAR628G0698 Trochodendron aralioides HOM05D000219 ORTHO05D004649 6.9e-08 60.8 71 45.1
SHI31709 Sapria himalayana HOM05D000219 ORTHO05D004649 9.1e-08 60.5 74 41.9
Sopen04g022970 Solanum pennellii HOM05D000219 ORTHO05D004649 9.1e-08 60.5 73 45.2
AUR62016924 Chenopodium quinoa HOM05D000219 ORTHO05D004649 1.2e-07 60.1 73 45.2
MBI04_g33333_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D004649 1.2e-07 60.1 73 45.2
Psat0s1144g0040 Pisum sativum HOM05D000219 ORTHO05D004649 1.2e-07 60.1 71 39.4
Sopen04g022950 Solanum pennellii HOM05D000219 ORTHO05D000001 1.2e-07 60.1 68 51.5
Aqoxy2G01146 Aquilegia oxysepala HOM05D000219 ORTHO05D004649 1.5e-07 59.7 73 46.6
Nn1g05995 Nelumbo nucifera HOM05D000219 ORTHO05D004649 2.0e-07 59.3 75 45.3
AUR62010269 Chenopodium quinoa HOM05D000219 ORTHO05D004649 2.6e-07 58.9 73 43.8
ClCG01G015950 Citrullus lanatus HOM05D000219 ORTHO05D004649 2.6e-07 58.9 73 46.6
DCAR_027131 Daucus carota HOM05D000219 ORTHO05D004649 3.4e-07 58.5 73 46.6
Os05g0535500 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D004649 3.4e-07 58.5 73 43.8
Atru.chr10.1102 Acer truncatum HOM05D000219 ORTHO05D004649 4.5e-07 58.2 60 51.7
PSO782G0604 Papaver somniferum HOM05D000219 ORTHO05D004649 4.5e-07 58.2 73 41.1
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 5.9e-07 57.8 73 41.1
RcHm_v2.0_Chr2g0117491 Rosa chinensis HOM05D000219 ORTHO05D004649 1.3e-06 56.6 73 42.5
MELO3C007464.2 Cucumis melo HOM05D000219 ORTHO05D004649 2.9e-06 55.5 73 45.2
PSO063G0175 Papaver somniferum HOM05D000219 ORTHO05D004649 8.5e-06 53.9 73 39.7


User provided reference genes

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