Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p19210 Brassica napus HOM05D001639 ORTHO05D008660 2.1e-163 578.9 283 100.0
Sp5g29420 Schrenkiella parvula HOM05D001639 ORTHO05D008660 1.3e-80 303.9 302 58.3
Carub.0002s2103 Capsella rubella HOM05D001639 ORTHO05D008660 4.9e-80 302.0 302 57.3
Thhalv10018752m.g Eutrema salsugineum HOM05D001639 ORTHO05D008660 4.1e-79 298.9 302 57.0
AL2G34120 Arabidopsis lyrata HOM05D001639 ORTHO05D008660 1.6e-78 297.0 302 57.6
BcaB05g24845 Brassica carinata HOM05D001639 ORTHO05D008660 7.8e-78 294.7 299 57.2
AT1G74240 Arabidopsis thaliana HOM05D001639 ORTHO05D008660 1.7e-77 293.5 302 56.0
A07p40080 Brassica napus HOM05D001639 ORTHO05D008660 1.7e-77 293.5 302 57.3
BraA07t31552Z Brassica rapa HOM05D001639 ORTHO05D008660 1.7e-77 293.5 302 57.3
BolC6t39872H Brassica oleracea HOM05D001639 ORTHO05D008660 2.3e-77 293.1 302 57.3
C06p48430 Brassica napus HOM05D001639 ORTHO05D008660 3.0e-77 292.7 302 57.3
BcaC08g46856 Brassica carinata HOM05D001639 ORTHO05D008660 3.3e-76 289.3 297 57.6
Aa31LG4G4530 Aethionema arabicum HOM05D001639 ORTHO05D008660 1.5e-73 280.4 303 53.5
CARHR067500 Cardamine hirsuta HOM05D001639 ORTHO05D008660 1.5e-73 280.4 302 54.0
BcaC03g15496 Brassica carinata HOM05D001639 ORTHO05D008660 2.5e-68 263.1 234 65.0
BolC2t09207H Brassica oleracea HOM05D001639 ORTHO05D008660 1.5e-60 237.3 208 64.9
Gohir.D12G185500 Gossypium hirsutum HOM05D001639 ORTHO05D008660 8.1e-59 231.5 303 45.2
Gohir.A12G182400 Gossypium hirsutum HOM05D001639 ORTHO05D008660 2.4e-58 229.9 303 45.2
Gorai.008G198900 Gossypium raimondii HOM05D001639 ORTHO05D008660 2.4e-58 229.9 303 44.9
MD14G1211900 Malus domestica HOM05D001639 ORTHO05D008660 4.0e-58 229.2 305 45.6
THA.LOC104813287 Tarenaya hassleriana HOM05D001639 ORTHO05D008660 8.9e-58 228.0 300 49.3
Cfa019328 Carpinus fangiana HOM05D001639 ORTHO05D008660 2.6e-57 226.5 305 46.6
BcaC03g15491 Brassica carinata HOM05D000142 ORTHO05D008660 9.9e-57 224.6 168 71.4
Thecc.03G101300 Theobroma cacao HOM05D001639 ORTHO05D008660 9.9e-57 224.6 305 45.9
Prupe.5G204700 Prunus persica HOM05D001639 ORTHO05D008660 1.3e-56 224.2 305 45.9
QL10p019432 Quercus lobata HOM05D001639 ORTHO05D008660 2.9e-56 223.0 305 44.9
RcHm_v2.0_Chr7g0183061 Rosa chinensis HOM05D001639 ORTHO05D008660 3.8e-56 222.6 307 45.0
Dinv17409 Davidia involucrata HOM05D001639 ORTHO05D008660 4.9e-56 222.2 307 45.6
CiPaw.11G053000 Carya illinoinensis HOM05D001639 ORTHO05D008660 8.4e-56 221.5 307 45.6
vmacro16498 Vaccinium macrocarpon HOM05D001639 ORTHO05D008660 1.4e-55 220.7 305 45.9
GSVIVG01007869001 Vitis vinifera HOM05D001639 ORTHO05D008660 1.9e-55 220.3 305 44.6
HanXRQChr16g0517681 Helianthus annuus HOM05D001639 ORTHO05D008660 2.4e-55 219.9 307 45.3
TAR629G2677 Trochodendron aralioides HOM05D001639 ORTHO05D008660 3.2e-55 219.5 307 44.3
FAN08G2252 Fragaria x ananassa HOM05D001639 ORTHO05D008660 4.1e-55 219.2 307 44.6
FAN13G0745 Fragaria x ananassa HOM05D001639 ORTHO05D008660 4.1e-55 219.2 307 44.6
Rhsim12G0151000 Rhododendron simsii HOM05D001639 ORTHO05D008660 5.4e-55 218.8 305 46.6
FvH4_5g13870 Fragaria vesca HOM05D001639 ORTHO05D008660 2.1e-54 216.9 307 44.3
Haze_07720 Corylus avellana HOM05D001639 ORTHO05D008660 2.7e-54 216.5 268 48.1
Lj5A102T95 Lonicera japonica HOM05D001639 ORTHO05D008660 4.6e-54 215.7 305 43.9
ECA247G0308 Erigeron canadensis HOM05D001639 ORTHO05D008660 1.3e-53 214.2 307 44.6
MBI14_g11781_MAGBIO Magnolia biondii HOM05D001639 ORTHO05D008660 1.3e-53 214.2 305 43.6
Glyma.04G163000 Glycine max HOM05D001639 ORTHO05D008660 2.3e-53 213.4 307 45.3
Manes.14G085300 Manihot esculenta HOM05D001639 ORTHO05D008660 2.3e-53 213.4 305 43.9
Aqoxy3G03639 Aquilegia oxysepala HOM05D001639 ORTHO05D008660 5.1e-53 212.2 305 43.0
CSS0020342 Camellia sinensis var. sinensis HOM05D000883 ORTHO05D008660 6.6e-53 211.8 307 46.3
Ciclev10020739m.g Citrus clementina HOM05D001639 ORTHO05D008660 6.6e-53 211.8 307 44.3
DCAR_010158 Daucus carota HOM05D001639 ORTHO05D008660 8.7e-53 211.5 319 42.3
Duzib205G0038 Durio zibethinus HOM05D001639 ORTHO05D008660 8.7e-53 211.5 304 44.1
Os03g0213800 Oryza sativa ssp. japonica HOM05D001639 ORTHO05D008660 1.1e-52 211.1 305 43.3
Actinidia35036 Actinidia chinensis HOM05D001639 ORTHO05D008660 1.9e-52 210.3 285 45.6
Phvul.009G191500 Phaseolus vulgaris HOM05D001639 ORTHO05D008660 1.9e-52 210.3 305 43.9
VMungo1309G0950 Vigna mungo HOM05D001639 ORTHO05D008660 1.9e-52 210.3 305 44.6
ClCG06G015660 Citrullus lanatus HOM05D001639 ORTHO05D008660 2.5e-52 209.9 303 43.9
AUR62021566 Chenopodium quinoa HOM05D001639 ORTHO05D008660 3.3e-52 209.5 306 42.8
Sed0002915 Sechium edule HOM05D001639 ORTHO05D008660 3.3e-52 209.5 303 43.9
Hund02588 Selenicereus undatus HOM05D001639 ORTHO05D008660 3.3e-52 209.5 306 43.1
Lsat_1_v5_gn_1_13480 Lactuca sativa HOM05D001639 ORTHO05D008660 4.3e-52 209.1 304 44.4
AUR62008523 Chenopodium quinoa HOM05D001639 ORTHO05D008660 5.6e-52 208.8 306 42.8
arahy.Tifrunner.gnm1.ann1.F6S0WT Arachis hypogaea HOM05D001639 ORTHO05D008660 9.6e-52 208.0 307 43.0
COL.COLO4_02825 Corchorus olitorius HOM05D001639 ORTHO05D008660 9.6e-52 208.0 266 47.7
EL10Ac5g11126 Beta vulgaris HOM05D001639 ORTHO05D008660 1.2e-51 207.6 306 42.8
Lalb_Chr23g0273971 Lupinus albus HOM05D001639 ORTHO05D008660 2.1e-51 206.8 305 43.3
PGR083G0626 Punica granatum HOM05D001639 ORTHO05D008660 2.1e-51 206.8 307 43.3
MELO3C017223.2 Cucumis melo HOM05D001639 ORTHO05D008660 4.7e-51 205.7 303 42.9
Nitab4.5_0003660g0030 Nicotiana tabacum HOM05D001639 ORTHO05D008660 4.7e-51 205.7 305 43.6
Cc00_g01240 Coffea canephora HOM05D001639 ORTHO05D008660 8.1e-51 204.9 307 43.0
Lj1g0018856 Lotus japonicus HOM05D001639 ORTHO05D008660 1.1e-50 204.5 305 42.0
Sc10g0009730 Simmondsia chinensis HOM05D001639 ORTHO05D008660 1.4e-50 204.1 268 44.8
Psat5g208120 Pisum sativum HOM05D001639 ORTHO05D008660 1.2e-49 201.1 268 44.4
CDE07G1793 Ceratophyllum demersum HOM05D001639 ORTHO05D008660 2.0e-49 200.3 307 41.7
Medtr3g025800 Medicago truncatula HOM05D001639 ORTHO05D008660 2.6e-49 199.9 307 43.0
HPP92_026870 Vanilla planifolia HOM05D001639 ORTHO05D008660 2.6e-49 199.9 305 42.0
ATR0730G033 Amborella trichopoda HOM05D001639 ORTHO05D008660 3.4e-49 199.5 306 42.2
FAN18G4546 Fragaria x ananassa HOM05D001639 ORTHO05D008660 4.4e-49 199.1 307 42.3
Ah.02g114010 Amaranthus hybridus HOM05D001639 ORTHO05D008660 5.8e-49 198.7 242 46.3
Hma1.2p1_0060F.1_g033130 Hydrangea macrophylla HOM05D000883 ORTHO05D008660 5.8e-49 198.7 309 42.7
Zm00001eb008590 Zea mays HOM05D001639 ORTHO05D008660 5.8e-49 198.7 305 42.6
SGA_v2.0_scaffold28G11758 Striga asiatica HOM05D001639 ORTHO05D008660 7.6e-49 198.4 305 41.3
PSO017G0084 Papaver somniferum HOM05D001639 ORTHO05D008660 2.2e-48 196.8 305 40.7
arahy.Tifrunner.gnm1.ann1.8PG2RG Arachis hypogaea HOM05D001639 ORTHO05D008660 2.9e-48 196.4 327 40.4
PSO478G1687 Papaver somniferum HOM05D001639 ORTHO05D008660 4.9e-48 195.7 305 40.7
MSTRG.22967 Avicennia marina HOM05D001639 ORTHO05D008660 9.3e-47 191.4 303 40.6
Sabra12G0047000 Salix brachista HOM05D000883 ORTHO05D008660 4.6e-46 189.1 306 43.1
Potri.012G066000 Populus trichocarpa HOM05D001639 ORTHO05D008660 1.7e-45 187.2 300 43.3
Cpa.g.sc7.193 Carica papaya HOM05D001639 ORTHO05D008660 2.3e-45 186.8 211 50.2
SalBow5G4026 Salvia bowleyana HOM05D001639 ORTHO05D008660 6.6e-45 185.3 323 38.4
Hund09908 Selenicereus undatus HOM05D001639 ORTHO05D008660 1.9e-44 183.7 293 42.0
Nitab4.5_0005072g0040 Nicotiana tabacum HOM05D001639 ORTHO05D008660 1.3e-43 181.0 305 41.6
SEGI_05413 Sequoiadendron giganteum HOM05D001639 ORTHO05D008660 6.2e-43 178.7 302 39.1
Eucgr.B00588 Eucalyptus grandis HOM05D001639 ORTHO05D008660 3.4e-41 172.9 211 48.8
Atru.chr9.589 Acer truncatum HOM05D001639 ORTHO05D008660 1.7e-40 170.6 211 48.3
CsaV3_1G002900 Cucumis sativus L. HOM05D001639 ORTHO05D008660 1.4e-39 167.5 209 48.8
TPR.G12290 Trifolium pratense HOM05D001639 ORTHO05D008660 6.7e-37 158.7 205 46.8
Ah.11g047810 Amaranthus hybridus HOM05D001639 ORTHO05D008660 1.5e-36 157.5 169 48.5
MD06G1202800 Malus domestica HOM05D001639 ORTHO05D008660 2.8e-35 153.3 170 45.3
HPP92_020478 Vanilla planifolia HOM05D001639 ORTHO05D008660 3.7e-35 152.9 305 37.0
C02p31800 Brassica napus HOM05D001639 ORTHO05D008660 4.9e-32 142.5 208 49.0
Mapoly0002s0071 Marchantia polymorpha HOM05D000883 ORTHO05D008660 1.2e-30 137.9 310 32.9
AagrBONN_evm.TU.Sc2ySwM_117.3407 Anthoceros agrestis HOM05D001639 ORTHO05D008660 4.8e-27 125.9 297 33.7
Pp3c22_12930 Physcomitrium patens HOM05D001639 ORTHO05D008660 1.5e-25 120.9 304 32.2
Pp3c22_12945 Physcomitrium patens HOM05D001639 ORTHO05D008660 1.5e-25 120.9 304 32.2
Mapoly0001s0536 Marchantia polymorpha HOM05D000883 ORTHO05D008660 1.7e-24 117.5 307 31.9
SMO364G0377 Selaginella moellendorffii HOM05D001639 ORTHO05D008660 1.0e-21 108.2 307 30.0
SHI27059 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-16 91.7 73 63.0
Peaxi162Scf00702g00419 Petunia axillaris HOM05D001639 ORTHO05D008660 6.5e-16 89.0 117 43.6
PGR044G2586 Punica granatum HOM05D001639 ORTHO05D008660 6.7e-13 79.0 101 47.5
CBR_g66807 Chara braunii HOM05D000883 ORTHO05D008660 3.3e-12 76.6 164 32.3
TPR.G12163 Trifolium pratense HOM05D000883 ORTHO05D008660 2.2e-11 73.9 48 68.8
Ca_14339_v3 Cicer arietinum L. HOM05D000883 ORTHO05D008660 1.8e-10 70.9 48 64.6
SHI27051 Sapria himalayana HOM05D000883 ORTHO05D008660 1.2e-09 68.2 48 58.3
MD05G1033900 Malus domestica HOM05D000883 ORTHO05D003260 6.5e-08 62.4 282 26.2
Sed0019862 Sechium edule HOM05D000883 ORTHO05D003260 3.2e-07 60.1 286 24.1
ClCG08G007350 Citrullus lanatus HOM05D000883 ORTHO05D003260 5.5e-07 59.3 282 23.0
CsaV3_6G005000 Cucumis sativus L. HOM05D000883 ORTHO05D003260 1.6e-06 57.8 282 24.1
Nitab4.5_0006843g0030 Nicotiana tabacum HOM05D000883 ORTHO05D003260 2.7e-06 57.0 286 25.2
RcHm_v2.0_Chr6g0274151 Rosa chinensis HOM05D000883 ORTHO05D003260 2.7e-06 57.0 298 26.2
Lalb_Chr02g0141591 Lupinus albus HOM05D000883 ORTHO05D003260 3.6e-06 56.6 302 24.8


User provided reference genes

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