Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 3.8e-48 194.5 98 100.0
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 4.3e-44 181.0 98 92.9
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 5.5e-31 137.5 95 77.9
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 1.0e-21 106.7 69 76.8
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 5.0e-16 87.8 118 43.2
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 5.5e-15 84.3 126 39.7
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 7.2e-15 84.0 124 40.3
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.2e-14 83.2 126 38.9
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.0e-13 80.1 118 41.5
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.0e-13 80.1 117 39.3
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.8e-13 79.3 117 40.2
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 2.3e-13 79.0 118 39.8
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 1.2e-12 76.6 123 39.0
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 1.2e-12 76.6 118 39.0
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 2.6e-12 75.5 48 70.8
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 4.4e-12 74.7 121 39.7
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.4e-12 74.7 116 37.1
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 5.7e-12 74.3 48 66.7
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 5.7e-12 74.3 112 36.6
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 5.7e-12 74.3 48 64.6
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 9.8e-12 73.6 48 66.7
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 1.7e-11 72.8 48 66.7
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.8e-11 72.0 112 34.8
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 3.7e-11 71.6 48 64.6
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 3.7e-11 71.6 48 62.5
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 4.8e-11 71.2 48 66.7
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 4.8e-11 71.2 48 64.6
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 4.8e-11 71.2 48 64.6
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 6.3e-11 70.9 48 62.5
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 8.3e-11 70.5 48 62.5
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 8.3e-11 70.5 117 35.9
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 8.3e-11 70.5 48 64.6
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 8.3e-11 70.5 48 64.6
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.4e-10 69.7 48 62.5
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 1.4e-10 69.7 47 66.0
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.1e-10 68.6 48 60.4
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 3.1e-10 68.6 48 62.5
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 3.1e-10 68.6 48 60.4
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 5.4e-10 67.8 48 60.4
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 5.4e-10 67.8 48 58.3
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 7.0e-10 67.4 48 62.5
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 9.1e-10 67.0 48 60.4
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 1.2e-09 66.6 116 37.9
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.2e-09 66.6 46 60.9
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.6e-09 66.2 55 54.5
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 1.6e-09 66.2 48 60.4
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 2.0e-09 65.9 46 65.2
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 3.5e-09 65.1 48 60.4
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.5e-09 65.1 124 34.7
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.5e-09 64.7 108 40.7
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 1.3e-08 63.2 48 58.3
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 1.3e-08 63.2 39 69.2
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.7e-08 62.8 39 69.2
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.2e-08 62.4 39 69.2
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.2e-08 62.4 39 69.2
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 2.2e-08 62.4 39 69.2
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 2.9e-08 62.0 39 66.7
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 5.0e-08 61.2 42 61.9
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 5.0e-08 61.2 42 61.9
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 8.5e-08 60.5 39 66.7
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 1.5e-07 59.7 38 68.4
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 1.9e-07 59.3 39 61.5
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 1.9e-07 59.3 48 56.2
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 1.9e-07 59.3 38 68.4
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.9e-07 59.3 38 65.8
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 3.2e-07 58.5 41 63.4
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 4.2e-07 58.2 37 64.9
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 5.5e-07 57.8 37 67.6
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 7.2e-07 57.4 39 59.0
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.2e-07 57.4 70 42.9
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.2e-07 57.4 84 38.1
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 7.2e-07 57.4 39 61.5
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 9.4e-07 57.0 38 65.8
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 9.4e-07 57.0 38 63.2
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 1.2e-06 56.6 38 60.5
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 1.2e-06 56.6 94 38.3
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 1.2e-06 56.6 39 61.5
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.2e-06 56.6 39 61.5
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 1.2e-06 56.6 38 60.5
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 1.6e-06 56.2 39 61.5
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 1.6e-06 56.2 39 56.4
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 2.1e-06 55.8 42 57.1
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 2.1e-06 55.8 42 57.1
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 2.7e-06 55.5 37 59.5
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 2.7e-06 55.5 35 62.9
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 3.6e-06 55.1 38 57.9
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 3.6e-06 55.1 38 57.9
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 3.6e-06 55.1 38 60.5
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 3.6e-06 55.1 38 60.5
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 4.7e-06 54.7 36 61.1
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 4.7e-06 54.7 36 61.1
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 6.1e-06 54.3 39 53.8
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 6.1e-06 54.3 38 60.5
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 8.0e-06 53.9 42 57.1


User provided reference genes

Program Settings