Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 1.8e-60 235.7 116 100.0
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 2.8e-18 95.5 82 63.4
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 2.4e-17 92.4 84 59.5
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 9.1e-17 90.5 84 60.7
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 2.7e-16 89.0 84 59.5
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 3.5e-16 88.6 84 59.5
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 4.5e-16 88.2 84 59.5
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 4.5e-16 88.2 84 59.5
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 4.5e-16 88.2 84 59.5
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 4.5e-16 88.2 84 59.5
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 5.9e-16 87.8 84 59.5
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 5.9e-16 87.8 84 59.5
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 5.9e-16 87.8 84 59.5
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 5.9e-16 87.8 84 59.5
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 5.9e-16 87.8 84 59.5
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.3e-15 86.7 84 58.3
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.3e-15 86.7 84 58.3
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.3e-15 86.7 84 58.3
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.7e-15 86.3 84 58.3
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 2.2e-15 85.9 84 58.3
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 2.2e-15 85.9 84 57.1
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 6.5e-15 84.3 84 56.0
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 1.5e-14 83.2 84 54.8
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 2.7e-13 79.0 83 54.2
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 4.7e-13 78.2 84 52.4
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 1.0e-12 77.0 84 53.6
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 1.0e-12 77.0 84 53.6
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 1.8e-12 76.3 84 51.2
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.8e-12 76.3 84 52.4
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 3.0e-12 75.5 84 51.2
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 3.0e-12 75.5 84 51.2
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 3.0e-12 75.5 84 51.2
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 3.0e-12 75.5 84 51.2
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 4.0e-12 75.1 83 50.6
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 4.0e-12 75.1 84 50.0
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 4.0e-12 75.1 83 51.8
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 4.0e-12 75.1 84 52.4
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 5.2e-12 74.7 83 51.8
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 5.2e-12 74.7 83 51.8
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 6.8e-12 74.3 84 51.2
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 8.8e-12 73.9 84 51.2
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.2e-11 73.6 83 50.6
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 1.5e-11 73.2 83 50.6
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.5e-11 73.2 83 50.6
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 3.4e-11 72.0 84 51.2
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 3.4e-11 72.0 84 51.2
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 5.7e-11 71.2 84 48.8
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 2.8e-10 68.9 83 48.2
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 3.7e-10 68.6 84 46.4
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 3.7e-10 68.6 83 48.2
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 8.3e-10 67.4 101 42.6
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 8.3e-10 67.4 82 47.6
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 5.4e-09 64.7 84 47.6
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 7.0e-09 64.3 82 47.6
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 2.7e-08 62.4 84 44.0
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 5.9e-08 61.2 80 46.2
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 7.7e-08 60.8 82 43.9
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 1.7e-07 59.7 83 41.0
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 2.3e-07 59.3 32 84.4
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 8.6e-07 57.4 82 41.5
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 1.1e-06 57.0 70 48.6
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 1.1e-06 57.0 70 48.6
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 1.5e-06 56.6 79 44.3
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.5e-06 56.6 66 50.0
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 4.2e-06 55.1 70 48.6
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 7.2e-06 54.3 68 47.1
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 9.5e-06 53.9 79 44.3


User provided reference genes

Program Settings