Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p17830 Brassica napus HOM05D000098 ORTHO05D000523 1.1e-57 226.5 116 100.0
BraA02t06830Z Brassica rapa HOM05D000098 ORTHO05D000523 6.3e-42 174.1 129 76.0
A02p17810 Brassica napus HOM05D000098 ORTHO05D000523 6.9e-41 170.6 129 74.4
BcaC03g15351 Brassica carinata HOM05D000098 ORTHO05D000523 2.2e-39 165.6 129 72.9
C02p29590 Brassica napus HOM05D000098 ORTHO05D000523 2.2e-39 165.6 129 72.9
BolC2t09007H Brassica oleracea HOM05D000098 ORTHO05D000523 2.9e-39 165.2 129 72.9
A07p38360 Brassica napus HOM05D000098 ORTHO05D000523 1.5e-32 142.9 129 65.1
BraA07t31397Z Brassica rapa HOM05D000098 ORTHO05D000523 4.5e-32 141.4 129 64.3
C06p46390 Brassica napus HOM05D000098 ORTHO05D000523 2.1e-29 132.5 130 61.5
BcaC08g46670 Brassica carinata HOM05D000098 ORTHO05D000523 4.7e-29 131.3 130 60.8
BolC6t39686H Brassica oleracea HOM05D000098 ORTHO05D000523 1.4e-28 129.8 129 60.5
Sp5g27320 Schrenkiella parvula HOM05D000098 ORTHO05D000523 1.4e-28 129.8 134 59.7
BcaB03g14967 Brassica carinata HOM05D000098 ORTHO05D000523 3.9e-28 128.3 129 59.7
BraA02t06832Z Brassica rapa HOM05D000098 ORTHO05D000523 3.9e-28 128.3 70 100.0
BcaB05g24731 Brassica carinata HOM05D000098 ORTHO05D000523 1.3e-26 123.2 129 59.7
AL2G31900 Arabidopsis lyrata HOM05D000098 ORTHO05D000523 7.0e-25 117.5 134 57.5
AT1G72230 Arabidopsis thaliana HOM05D000098 ORTHO05D000523 1.6e-24 116.3 132 56.8
CARHR065090 Cardamine hirsuta HOM05D000098 ORTHO05D000523 1.0e-23 113.6 137 53.3
Thhalv10019565m.g Eutrema salsugineum HOM05D000098 ORTHO05D000523 3.2e-22 108.6 130 54.6
Thhalv10019200m.g Eutrema salsugineum HOM05D000098 ORTHO05D000523 4.2e-22 108.2 137 52.6
Carub.0002s1904 Capsella rubella HOM05D000098 ORTHO05D000523 1.8e-20 102.8 132 51.5
Lj1g0020186 Lotus japonicus HOM05D000098 ORTHO05D000523 7.5e-11 70.9 72 50.0
Cpa.g.sc36.187 Carica papaya HOM05D000098 ORTHO05D000523 1.3e-10 70.1 138 39.9
Thhalv10009689m.g Eutrema salsugineum HOM05D000098 ORTHO05D000523 2.8e-10 68.9 129 41.9
VMungo1309G2634 Vigna mungo HOM05D000098 ORTHO05D000523 4.8e-10 68.2 94 40.4
Sabra02G0079400 Salix brachista HOM05D000098 ORTHO05D000523 6.3e-10 67.8 90 42.2
AT1G22480 Arabidopsis thaliana HOM05D000098 ORTHO05D000523 1.1e-09 67.0 133 44.4
Glyma.06G100300 Glycine max HOM05D000098 ORTHO05D000523 1.1e-09 67.0 73 45.2
Potri.002G101200 Populus trichocarpa HOM05D000098 ORTHO05D000523 1.1e-09 67.0 129 37.2
Lalb_Chr23g0270231 Lupinus albus HOM05D000098 ORTHO05D000523 1.8e-09 66.2 66 50.0
Lalb_Chr23g0270331 Lupinus albus HOM05D000098 ORTHO05D000523 1.8e-09 66.2 66 50.0
Phvul.009G033500 Phaseolus vulgaris HOM05D000098 ORTHO05D000523 1.8e-09 66.2 84 42.9
AL1G36000 Arabidopsis lyrata HOM05D000098 ORTHO05D000523 2.4e-09 65.9 135 40.7
Ca_16035_v3 Cicer arietinum L. HOM05D000098 ORTHO05D000523 2.4e-09 65.9 72 48.6
FAN04G1745 Fragaria x ananassa HOM05D000098 ORTHO05D000523 2.4e-09 65.9 100 41.0
RcHm_v2.0_Chr7g0238371 Rosa chinensis HOM05D000098 ORTHO05D000523 2.4e-09 65.9 128 38.3
THA.LOC104810643 Tarenaya hassleriana HOM05D000098 ORTHO05D000523 2.4e-09 65.9 129 37.2
Potri.002G101300 Populus trichocarpa HOM05D000098 ORTHO05D000523 3.1e-09 65.5 129 35.7
Glyma.14G177600 Glycine max HOM05D000098 ORTHO05D000523 4.1e-09 65.1 66 50.0
Sabra02G0079300 Salix brachista HOM05D000098 ORTHO05D000523 4.1e-09 65.1 66 47.0
arahy.Tifrunner.gnm1.ann1.WAM2FY Arachis hypogaea HOM05D000098 ORTHO05D000523 5.4e-09 64.7 72 44.4
Ciclev10002591m.g Citrus clementina HOM05D000098 ORTHO05D000523 5.4e-09 64.7 134 33.6
Aa31LG7G6400 Aethionema arabicum HOM05D000098 ORTHO05D000523 7.0e-09 64.3 66 51.5
MSTRG.24441 Avicennia marina HOM05D000098 ORTHO05D000523 7.0e-09 64.3 74 50.0
Sp1g19960 Schrenkiella parvula HOM05D000098 ORTHO05D000523 7.0e-09 64.3 86 45.3
VMungo0647G0472 Vigna mungo HOM05D000098 ORTHO05D000523 7.0e-09 64.3 73 46.6
FAN08G2808 Fragaria x ananassa HOM05D000098 ORTHO05D000523 1.2e-08 63.5 86 43.0
FAN13G3004 Fragaria x ananassa HOM05D000098 ORTHO05D000523 1.2e-08 63.5 86 43.0
Medtr3g099580 Medicago truncatula HOM05D000098 ORTHO05D000523 1.2e-08 63.5 64 50.0
THA.LOC104809724 Tarenaya hassleriana HOM05D000098 ORTHO05D000523 1.2e-08 63.5 91 42.9
TPR.G7350 Trifolium pratense HOM05D000098 ORTHO05D000523 1.2e-08 63.5 71 45.1
vmacro21286 Vaccinium macrocarpon HOM05D000098 ORTHO05D000523 1.2e-08 63.5 120 37.5
CARHR022820 Cardamine hirsuta HOM05D000098 ORTHO05D000523 2.0e-08 62.8 66 50.0
CiPaw.15G045400 Carya illinoinensis HOM05D000098 ORTHO05D000523 2.0e-08 62.8 84 42.9
Glyma.02G209500 Glycine max HOM05D000098 ORTHO05D000523 2.0e-08 62.8 66 47.0
arahy.Tifrunner.gnm1.ann1.H6YETZ Arachis hypogaea HOM05D000098 ORTHO05D000523 2.7e-08 62.4 72 43.1
THA.LOC104800225 Tarenaya hassleriana HOM05D000098 ORTHO05D000523 2.7e-08 62.4 68 47.1
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 3.5e-08 62.0 66 47.0
Gohir.A05G223300 Gossypium hirsutum HOM05D000098 ORTHO05D000523 4.5e-08 61.6 138 31.9
Phvul.008G177100 Phaseolus vulgaris HOM05D000098 ORTHO05D000523 4.5e-08 61.6 91 39.6
Solyc04g074740.4 Solanum lycopersicum HOM05D000098 ORTHO05D000523 4.5e-08 61.6 130 36.9
TAR628G0866 Trochodendron aralioides HOM05D000098 ORTHO05D000523 4.5e-08 61.6 72 43.1
arahy.Tifrunner.gnm1.ann1.FZM120 Arachis hypogaea HOM05D000098 ORTHO05D000523 5.9e-08 61.2 69 46.4
arahy.Tifrunner.gnm1.ann1.X7C896 Arachis hypogaea HOM05D000098 ORTHO05D000523 5.9e-08 61.2 69 46.4
SalBow7G1306 Salvia bowleyana HOM05D000098 ORTHO05D000523 7.7e-08 60.8 99 36.4
unitig_578.g16187 Utricularia gibba HOM05D000098 ORTHO05D000523 7.7e-08 60.8 64 46.9
MSTRG.22170 Avicennia marina HOM05D000098 ORTHO05D000523 1.0e-07 60.5 68 45.6
Oeu029733.1 Olea europaea HOM05D000098 ORTHO05D000523 1.0e-07 60.5 66 45.5
PGR031G0178 Punica granatum HOM05D000098 ORTHO05D000523 1.0e-07 60.5 75 46.7
Sed0008574 Sechium edule HOM05D000098 ORTHO05D000523 1.0e-07 60.5 89 39.3
BcaC05g26174 Brassica carinata HOM05D000098 ORTHO05D000523 1.3e-07 60.1 94 41.5
C05p21580 Brassica napus HOM05D000098 ORTHO05D000523 1.3e-07 60.1 94 41.5
BolC5t30853H Brassica oleracea HOM05D000098 ORTHO05D000523 1.3e-07 60.1 94 41.5
Migut.N02876 Erythranthe guttata HOM05D000098 ORTHO05D000523 1.3e-07 60.1 71 40.8
FvH4_5g36400 Fragaria vesca HOM05D000098 ORTHO05D000523 1.3e-07 60.1 86 41.9
FAN18G1793 Fragaria x ananassa HOM05D000098 ORTHO05D000523 1.3e-07 60.1 86 41.9
TWI56G0930 Tripterygium wilfordii HOM05D000098 ORTHO05D000523 1.3e-07 60.1 72 44.4
Aqoxy6G00708 Aquilegia oxysepala HOM05D000098 ORTHO05D000523 1.7e-07 59.7 130 35.4
CsaV3_3G047750 Cucumis sativus L. HOM05D000098 ORTHO05D000523 1.7e-07 59.7 89 39.3
Lj4P727T30 Lonicera japonica HOM05D000098 ORTHO05D000523 1.7e-07 59.7 73 42.5
MBI02_g10703_MAGBIO Magnolia biondii HOM05D000098 ORTHO05D000523 1.7e-07 59.7 92 41.3
Manes.18G063300 Manihot esculenta HOM05D000098 ORTHO05D000523 1.7e-07 59.7 140 32.1
Psat5g050400 Pisum sativum HOM05D000098 ORTHO05D000523 1.7e-07 59.7 73 43.8
Sopen04g029710 Solanum pennellii HOM05D000098 ORTHO05D000523 2.3e-07 59.3 66 45.5
vmacro04708 Vaccinium macrocarpon HOM05D000098 ORTHO05D000523 2.3e-07 59.3 75 44.0
Ah.05g169630 Amaranthus hybridus HOM05D000098 ORTHO05D000523 3.8e-07 58.5 87 44.8
BcaB07g32258 Brassica carinata HOM05D000098 ORTHO05D000523 3.8e-07 58.5 149 36.2
MELO3C003547.2 Cucumis melo HOM05D000098 ORTHO05D000523 3.8e-07 58.5 90 40.0
Eucgr.B00045 Eucalyptus grandis HOM05D000098 ORTHO05D000523 3.8e-07 58.5 71 43.7
CiPaw.16G032700 Carya illinoinensis HOM05D000098 ORTHO05D000523 5.0e-07 58.2 109 33.9
Hma1.2p1_1180F.1_g264700 Hydrangea macrophylla HOM05D000098 ORTHO05D000523 5.0e-07 58.2 68 42.6
Prupe.1G523700 Prunus persica HOM05D000098 ORTHO05D000523 5.0e-07 58.2 133 33.1
CANSAT25G0481 Cannabis sativa HOM05D000098 ORTHO05D000523 6.6e-07 57.8 68 44.1
SGA_v2.0_scaffold28G11899 Striga asiatica HOM05D000098 ORTHO05D000523 6.6e-07 57.8 121 36.4
CSS0011342 Camellia sinensis var. sinensis HOM05D000098 ORTHO05D000523 8.6e-07 57.4 84 38.1
Cfa017896 Carpinus fangiana HOM05D000098 ORTHO05D000523 8.6e-07 57.4 72 41.7
PGR042G0298 Punica granatum HOM05D000098 ORTHO05D000523 8.6e-07 57.4 73 41.1
EL10Ac1g01141 Beta vulgaris HOM05D000098 ORTHO05D000523 1.1e-06 57.0 72 40.3
A09p42300 Brassica napus HOM05D000098 ORTHO05D000523 1.1e-06 57.0 86 43.0
BraA09t39711Z Brassica rapa HOM05D000098 ORTHO05D000523 1.1e-06 57.0 86 43.0
COL.COLO4_12001 Corchorus olitorius HOM05D000098 ORTHO05D000523 1.1e-06 57.0 72 43.1
MD15G1377000 Malus domestica HOM05D000098 ORTHO05D000523 1.1e-06 57.0 70 44.3
Carub.0001s2201 Capsella rubella HOM05D000098 ORTHO05D000523 1.5e-06 56.6 139 37.4
Lj4C96G8 Lonicera japonica HOM05D000098 ORTHO05D000523 1.5e-06 56.6 83 37.3
Medtr3g099570 Medicago truncatula HOM05D000098 ORTHO05D000523 1.5e-06 56.6 93 43.0
Sc01g0000860 Simmondsia chinensis HOM05D000098 ORTHO05D000523 1.5e-06 56.6 104 34.6
Hund16886 Selenicereus undatus HOM05D000098 ORTHO05D000523 1.9e-06 56.2 114 36.0
GSVIVG01009090001 Vitis vinifera HOM05D000098 ORTHO05D000523 1.9e-06 56.2 89 38.2
Haze_18254 Corylus avellana HOM05D000098 ORTHO05D000523 2.5e-06 55.8 84 40.5
MD08G1189500 Malus domestica HOM05D000098 ORTHO05D000523 2.5e-06 55.8 132 34.8
Thecc.08G101300 Theobroma cacao HOM05D000098 ORTHO05D000523 2.5e-06 55.8 72 41.7
TAR376G0594 Trochodendron aralioides HOM05D000098 ORTHO05D000523 2.5e-06 55.8 83 37.3
Dinv44810 Davidia involucrata HOM05D000098 ORTHO05D000523 3.3e-06 55.5 72 38.9
Atru.chr13.1113 Acer truncatum HOM05D000098 ORTHO05D000523 4.2e-06 55.1 68 42.6
ECA232G0829 Erigeron canadensis HOM05D000098 ORTHO05D000523 4.2e-06 55.1 86 37.2
Lsat_1_v5_gn_9_73760 Lactuca sativa HOM05D000098 ORTHO05D000523 4.2e-06 55.1 125 31.2
Nitab4.5_0009374g0010 Nicotiana tabacum HOM05D000098 ORTHO05D000523 4.2e-06 55.1 66 43.9
Actinidia33120 Actinidia chinensis HOM05D003707 ORTHO05D004309 5.5e-06 54.7 66 40.9
MELO3C011049.2 Cucumis melo HOM05D000098 ORTHO05D000523 5.5e-06 54.7 91 37.4
QL02p002286 Quercus lobata HOM05D000098 ORTHO05D000523 5.5e-06 54.7 72 40.3
Cc00_g22250 Coffea canephora HOM05D000098 ORTHO05D000523 7.2e-06 54.3 72 40.3
ATR0684G124 Amborella trichopoda HOM05D000098 ORTHO05D000523 9.5e-06 53.9 70 38.6
CsaV3_2G029900 Cucumis sativus L. HOM05D000098 ORTHO05D000523 9.5e-06 53.9 107 34.6
Dinv07078 Davidia involucrata HOM05D000098 ORTHO05D000523 9.5e-06 53.9 131 30.5


User provided reference genes

Program Settings