Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 3.5e-83 311.6 159 100.0
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 3.5e-83 311.6 159 100.0
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 4.1e-44 181.8 95 97.9
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 1.5e-30 136.7 73 94.5
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 6.0e-27 124.8 342 32.7
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 8.6e-26 120.9 365 31.5
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 1.1e-25 120.6 367 31.1
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 3.3e-25 119.0 365 31.2
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 9.6e-25 117.5 365 31.2
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 1.6e-24 116.7 365 31.2
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 6.2e-24 114.8 364 30.8
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 4.4e-22 108.6 87 69.0
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 9.9e-22 107.5 364 29.9
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 9.9e-22 107.5 87 67.8
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 1.7e-21 106.7 87 66.7
BolC2t08947H Brassica oleracea HOM05D005625 ORTHO05D022022 2.1e-19 99.8 106 59.4
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 4.6e-19 98.6 87 62.1
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 1.7e-18 96.7 82 62.2
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 1.3e-16 90.5 87 58.6
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.3e-16 90.5 87 58.6
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 4.8e-16 88.6 155 37.4
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 8.1e-16 87.8 71 63.4
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 2.4e-15 86.3 154 36.4
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 2.4e-15 86.3 155 36.1
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 3.1e-15 85.9 71 64.8
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 3.1e-15 85.9 87 55.2
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 4.0e-15 85.5 71 59.2
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 5.3e-15 85.1 71 63.4
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 6.9e-15 84.7 71 62.0
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 6.9e-15 84.7 87 54.0
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.2e-14 84.0 73 60.3
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.2e-14 84.0 73 60.3
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 1.2e-14 84.0 71 62.0
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 1.2e-14 84.0 71 62.0
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 1.2e-14 84.0 71 62.0
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 2.0e-14 83.2 71 62.0
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 2.0e-14 83.2 71 62.0
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.0e-14 83.2 71 62.0
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.0e-14 83.2 71 62.0
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 2.6e-14 82.8 115 44.3
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 3.4e-14 82.4 87 52.9
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 3.4e-14 82.4 87 51.7
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 3.4e-14 82.4 71 59.2
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 3.4e-14 82.4 71 59.2
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 4.4e-14 82.0 71 60.6
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 4.4e-14 82.0 71 60.6
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 4.4e-14 82.0 71 59.2
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 5.8e-14 81.6 71 54.9
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 5.8e-14 81.6 87 51.7
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 7.6e-14 81.3 72 62.5
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 7.6e-14 81.3 87 51.7
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 7.6e-14 81.3 87 51.7
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 7.6e-14 81.3 71 62.0
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 9.9e-14 80.9 70 61.4
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 9.9e-14 80.9 115 43.5
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 9.9e-14 80.9 71 60.6
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 9.9e-14 80.9 71 56.3
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 9.9e-14 80.9 105 42.9
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 1.3e-13 80.5 71 57.7
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.3e-13 80.5 71 59.2
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.3e-13 80.5 71 59.2
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 1.3e-13 80.5 71 57.7
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.3e-13 80.5 71 57.7
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 1.7e-13 80.1 70 61.4
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 2.2e-13 79.7 71 56.3
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 2.2e-13 79.7 71 59.2
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 2.2e-13 79.7 70 58.6
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 2.9e-13 79.3 71 54.9
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 2.9e-13 79.3 71 54.9
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 3.8e-13 79.0 71 53.5
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 3.8e-13 79.0 72 52.8
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 4.9e-13 78.6 87 51.7
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 4.9e-13 78.6 71 54.9
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 6.4e-13 78.2 70 55.7
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 6.4e-13 78.2 78 51.3
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 8.4e-13 77.8 71 53.5
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 8.4e-13 77.8 153 35.3
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 8.4e-13 77.8 71 56.3
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.1e-12 77.4 71 56.3
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 1.1e-12 77.4 87 48.3
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 1.1e-12 77.4 71 53.5
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 1.4e-12 77.0 71 57.7
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 1.4e-12 77.0 71 53.5
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 1.4e-12 77.0 72 59.7
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 1.9e-12 76.6 71 60.6
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 1.9e-12 76.6 71 57.7
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 1.9e-12 76.6 87 47.1
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 2.4e-12 76.3 71 52.1
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 2.4e-12 76.3 87 49.4
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 2.4e-12 76.3 71 54.9
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 4.2e-12 75.5 71 50.7
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 4.2e-12 75.5 71 50.7
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 7.1e-12 74.7 72 59.7
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 7.1e-12 74.7 71 53.5
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 7.1e-12 74.7 87 48.3
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 7.1e-12 74.7 71 50.7
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 7.1e-12 74.7 71 56.3
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 1.2e-11 73.9 70 55.7
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 2.1e-11 73.2 72 55.6
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 2.1e-11 73.2 70 51.4
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 3.5e-11 72.4 78 46.2
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 6.0e-11 71.6 71 50.7
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 3.9e-10 68.9 72 54.2
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 3.9e-10 68.9 71 46.5
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 1.9e-09 66.6 45 75.6
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.9e-09 66.6 69 58.0
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 2.5e-09 66.2 69 53.6
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 2.5e-09 66.2 71 45.1
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 4.3e-09 65.5 71 45.1
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 9.6e-09 64.3 87 39.1
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 9.6e-09 64.3 76 40.8
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 3.6e-08 62.4 71 50.7
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 2.4e-07 59.7 55 58.2
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 9.0e-07 57.8 55 54.5
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 7.6e-06 54.7 106 33.0


User provided reference genes

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