Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p16560 Brassica napus HOM05D004641 ORTHO05D005871 9.6e-29 129.4 63 100.0
Carub.0001s2410 Capsella rubella HOM05D004641 ORTHO05D005871 3.6e-15 84.3 92 51.1
A09p40260 Brassica napus HOM05D004641 ORTHO05D005871 4.6e-15 84.0 90 53.3
BraA09t39524Z Brassica rapa HOM05D004641 ORTHO05D005871 4.6e-15 84.0 90 53.3
CARHR025060 Cardamine hirsuta HOM05D004641 ORTHO05D005871 6.1e-15 83.6 90 52.2
AL1G38720 Arabidopsis lyrata HOM05D004641 ORTHO05D005871 7.9e-15 83.2 92 50.0
AT1G26840 Arabidopsis thaliana HOM05D004641 ORTHO05D005871 7.9e-15 83.2 92 50.0
BcaC07g39267 Brassica carinata HOM05D004641 ORTHO05D005871 1.0e-14 82.8 90 52.2
A08p27580 Brassica napus HOM05D004641 ORTHO05D005871 1.0e-14 82.8 90 52.2
C08p22760 Brassica napus HOM05D004641 ORTHO05D005871 1.0e-14 82.8 90 52.2
BolC8t49912H Brassica oleracea HOM05D004641 ORTHO05D005871 1.0e-14 82.8 90 52.2
BraA08t34696Z Brassica rapa HOM05D004641 ORTHO05D005871 1.0e-14 82.8 90 52.2
BcaC05g26381 Brassica carinata HOM05D004641 ORTHO05D005871 1.8e-14 82.0 90 52.2
C05p24110 Brassica napus HOM05D004641 ORTHO05D005871 1.8e-14 82.0 90 52.2
BolC5t31146H Brassica oleracea HOM05D004641 ORTHO05D005871 1.8e-14 82.0 90 52.2
Sp1g21940 Schrenkiella parvula HOM05D004641 ORTHO05D005871 8.7e-14 79.7 90 50.0
Aa31LG7G8260 Aethionema arabicum HOM05D004641 ORTHO05D005871 2.5e-13 78.2 92 47.8
BcaB03g12011 Brassica carinata HOM05D004641 ORTHO05D005871 3.3e-13 77.8 90 50.0
THA.LOC104822117 Tarenaya hassleriana HOM05D004641 ORTHO05D005871 7.4e-13 76.6 90 48.9
Thhalv10008398m.g Eutrema salsugineum HOM05D004641 ORTHO05D005871 8.2e-12 73.2 92 46.7
Sp5g24800 Schrenkiella parvula HOM05D004641 ORTHO05D005871 1.8e-11 72.0 98 41.8
SGA_v2.0_scaffold53G19380 Striga asiatica HOM05D004641 ORTHO05D005871 1.8e-11 72.0 71 52.1
Manes.01G186500 Manihot esculenta HOM05D004641 ORTHO05D005871 5.3e-11 70.5 92 44.6
Peaxi162Scf00541g00527 Petunia axillaris HOM05D004641 ORTHO05D005871 6.9e-11 70.1 90 45.6
CANSAT64G1560 Cannabis sativa HOM05D004641 ORTHO05D005871 1.2e-10 69.3 90 43.3
CiPaw.06G083900 Carya illinoinensis HOM05D004641 ORTHO05D005871 1.2e-10 69.3 90 46.7
GSVIVG01020002001 Vitis vinifera HOM05D004641 ORTHO05D005871 1.2e-10 69.3 98 43.9
Dinv16637 Davidia involucrata HOM05D004641 ORTHO05D005871 1.5e-10 68.9 90 44.4
Potri.011G083700 Populus trichocarpa HOM05D004641 ORTHO05D005871 1.5e-10 68.9 90 44.4
Thecc.02G351000 Theobroma cacao HOM05D004641 ORTHO05D005871 1.5e-10 68.9 90 45.6
TAR629G2466 Trochodendron aralioides HOM05D004641 ORTHO05D005871 1.5e-10 68.9 98 43.9
CDE04G3358 Ceratophyllum demersum HOM05D004641 ORTHO05D005871 2.0e-10 68.6 74 47.3
Actinidia04038 Actinidia chinensis HOM05D004641 ORTHO05D005871 2.6e-10 68.2 92 42.4
Gohir.A13G074000 Gossypium hirsutum HOM05D004641 ORTHO05D005871 2.6e-10 68.2 90 44.4
Sabra11G0066400 Salix brachista HOM05D004641 ORTHO05D005871 2.6e-10 68.2 95 41.1
MD16G1074100 Malus domestica HOM05D004641 ORTHO05D005871 3.4e-10 67.8 89 44.9
Prupe.1G273100 Prunus persica HOM05D004641 ORTHO05D005871 3.4e-10 67.8 90 44.4
Rhsim07G0243500 Rhododendron simsii HOM05D004641 ORTHO05D005871 3.4e-10 67.8 92 41.3
vmacro04307 Vaccinium macrocarpon HOM05D004641 ORTHO05D005871 3.4e-10 67.8 92 41.3
arahy.Tifrunner.gnm1.ann1.K7EFN7 Arachis hypogaea HOM05D004641 ORTHO05D005871 4.5e-10 67.4 93 43.0
PSO017G4882 Papaver somniferum HOM05D004641 ORTHO05D005871 5.9e-10 67.0 90 44.4
PSO478G0089 Papaver somniferum HOM05D004641 ORTHO05D005871 5.9e-10 67.0 90 44.4
Ah.03g135170 Amaranthus hybridus HOM05D004641 ORTHO05D005871 7.7e-10 66.6 88 45.5
CSS0000565 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 7.7e-10 66.6 92 41.3
CSS0029182 Camellia sinensis var. sinensis HOM05D004641 ORTHO05D005871 7.7e-10 66.6 92 41.3
TWI12G0809 Tripterygium wilfordii HOM05D004641 ORTHO05D005871 7.7e-10 66.6 87 46.0
CiPaw.05G136500 Carya illinoinensis HOM05D004641 ORTHO05D005871 1.0e-09 66.2 95 41.1
Gohir.A01G134350 Gossypium hirsutum HOM05D004641 ORTHO05D005871 1.0e-09 66.2 90 43.3
Nitab4.5_0012364g0020 Nicotiana tabacum HOM05D004641 ORTHO05D005871 1.0e-09 66.2 90 43.3
Haze_12020 Corylus avellana HOM05D004641 ORTHO05D005871 1.3e-09 65.9 87 43.7
Lj3A1038G72 Lonicera japonica HOM05D004641 ORTHO05D005871 1.3e-09 65.9 92 42.4
C05p19510 Brassica napus HOM05D004641 ORTHO05D005871 1.7e-09 65.5 78 51.3
BolC5t30653H Brassica oleracea HOM05D004641 ORTHO05D005871 1.7e-09 65.5 78 51.3
Cpa.g.sc128.14 Carica papaya HOM05D004641 ORTHO05D005871 1.7e-09 65.5 90 43.3
Nitab4.5_0000703g0120 Nicotiana tabacum HOM05D004641 ORTHO05D005871 1.7e-09 65.5 90 43.3
Oeu001572.1 Olea europaea HOM05D004641 ORTHO05D005871 1.7e-09 65.5 98 40.8
PGR102G3009 Punica granatum HOM05D004641 ORTHO05D005871 1.7e-09 65.5 92 42.4
Atru.chr11.1801 Acer truncatum HOM05D004641 ORTHO05D005871 2.2e-09 65.1 90 43.3
Duzib268G0036 Durio zibethinus HOM05D004641 ORTHO05D005871 2.2e-09 65.1 90 43.3
HanXRQChr12g0362561 Helianthus annuus HOM05D004641 ORTHO05D005871 2.2e-09 65.1 92 43.5
MD13G1073100 Malus domestica HOM05D004641 ORTHO05D005871 2.2e-09 65.1 90 43.3
Gohir.D13G074100 Gossypium hirsutum HOM05D004641 ORTHO05D005871 2.9e-09 64.7 90 42.2
Gorai.013G084700 Gossypium raimondii HOM05D004641 ORTHO05D005871 2.9e-09 64.7 90 42.2
CsaV3_2G010800 Cucumis sativus L. HOM05D004641 ORTHO05D005871 5.0e-09 63.9 92 39.1
DCAR_007149 Daucus carota HOM05D004641 ORTHO05D005871 5.0e-09 63.9 92 41.3
HanXRQChr08g0210501 Helianthus annuus HOM05D004641 ORTHO05D005871 5.0e-09 63.9 92 42.4
Lalb_Chr10g0098211 Lupinus albus HOM05D004641 ORTHO05D005871 5.0e-09 63.9 89 41.6
Medtr5g040250 Medicago truncatula HOM05D004641 ORTHO05D005871 5.0e-09 63.9 89 42.7
Medtr7g039370 Medicago truncatula HOM05D004641 ORTHO05D005871 5.0e-09 63.9 89 42.7
TAR622G0412 Trochodendron aralioides HOM05D004641 ORTHO05D005871 5.0e-09 63.9 90 41.1
COL.COLO4_22996 Corchorus olitorius HOM05D004641 ORTHO05D005871 6.5e-09 63.5 90 42.2
Psat2g121160 Pisum sativum HOM05D004641 ORTHO05D005871 6.5e-09 63.5 89 42.7
SalBow2G2171 Salvia bowleyana HOM05D004641 ORTHO05D005871 6.5e-09 63.5 90 38.9
MSTRG.7808 Avicennia marina HOM05D004641 ORTHO05D005871 1.1e-08 62.8 90 37.8
A10p02040 Brassica napus HOM05D000207 ORTHO05D013918 1.1e-08 62.8 30 93.3
Ca_24263_v3 Cicer arietinum L. HOM05D004641 ORTHO05D005871 1.1e-08 62.8 89 41.6
Cc11_g13100 Coffea canephora HOM05D004641 ORTHO05D005871 1.1e-08 62.8 92 40.2
ClCG11G009310 Citrullus lanatus HOM05D004641 ORTHO05D005871 1.4e-08 62.4 92 39.1
Eucgr.B03435 Eucalyptus grandis HOM05D004641 ORTHO05D005871 1.4e-08 62.4 92 40.2
Lj2g0007835 Lotus japonicus HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 41.1
Os07g0628600 Oryza sativa ssp. japonica HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 40.0
Psat0s2466g0040 Pisum sativum HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 40.0
Sed0021592 Sechium edule HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 38.9
Sopen05g003330 Solanum pennellii HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 42.2
Zm00001eb328260 Zea mays HOM05D004641 ORTHO05D005871 1.4e-08 62.4 90 40.0
EL10Ac6g13193 Beta vulgaris HOM05D004641 ORTHO05D005871 1.9e-08 62.0 88 42.0
Gohir.A07G052500 Gossypium hirsutum HOM05D004641 ORTHO05D005871 1.9e-08 62.0 90 41.1
MD16G1073900 Malus domestica HOM05D004641 ORTHO05D005871 2.5e-08 61.6 92 41.3
Nn3g17219 Nelumbo nucifera HOM05D004641 ORTHO05D005871 2.5e-08 61.6 90 40.0
QL03p064370 Quercus lobata HOM05D004641 ORTHO05D005871 3.2e-08 61.2 89 43.8
PGSC0003DMG400003384 Solanum tuberosum HOM05D004641 ORTHO05D005871 3.2e-08 61.2 90 41.1
Aqoxy3G03361 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 4.2e-08 60.8 87 40.2
Aqoxy5G03781 Aquilegia oxysepala HOM05D004641 ORTHO05D005871 4.2e-08 60.8 87 41.4
VMungo1215G3365 Vigna mungo HOM05D004641 ORTHO05D005871 4.2e-08 60.8 89 39.3
Migut.L01304 Erythranthe guttata HOM05D004641 ORTHO05D005871 5.5e-08 60.5 90 36.7
Lalb_Chr17g0340601 Lupinus albus HOM05D004641 ORTHO05D005871 5.5e-08 60.5 89 40.4
Phvul.002G086150 Phaseolus vulgaris HOM05D004641 ORTHO05D005871 5.5e-08 60.5 89 38.2
Solyc05g007450.3 Solanum lycopersicum HOM05D004641 ORTHO05D005871 5.5e-08 60.5 90 41.1
Glyma.02G106600 Glycine max HOM05D004641 ORTHO05D005871 7.2e-08 60.1 89 39.3
ATR0800G170 Amborella trichopoda HOM05D004641 ORTHO05D005871 9.4e-08 59.7 98 40.8
CAN.G58.35 Capsicum annuum HOM05D004641 ORTHO05D005871 9.4e-08 59.7 90 40.0
CARHR062650 Cardamine hirsuta HOM05D004641 ORTHO05D005871 9.4e-08 59.7 98 39.8
ECA233G1872 Erigeron canadensis HOM05D004641 ORTHO05D005871 9.4e-08 59.7 92 40.2
Gohir.A08G223448 Gossypium hirsutum HOM05D004641 ORTHO05D005871 9.4e-08 59.7 85 41.2
RcHm_v2.0_Chr4g0439951 Rosa chinensis HOM05D004641 ORTHO05D005871 1.2e-07 59.3 90 42.2
AUR62005767 Chenopodium quinoa HOM05D004641 ORTHO05D005871 1.6e-07 58.9 90 40.0
FvH4_4g31460 Fragaria vesca HOM05D004641 ORTHO05D005871 1.6e-07 58.9 90 41.1
FAN22G2174 Fragaria x ananassa HOM05D004641 ORTHO05D005871 1.6e-07 58.9 90 41.1
Glyma.01G046400 Glycine max HOM05D004641 ORTHO05D005871 1.6e-07 58.9 89 38.2
HPP92_016908 Vanilla planifolia HOM05D004641 ORTHO05D005871 1.6e-07 58.9 90 38.9
SEGI_09090 Sequoiadendron giganteum HOM05D004641 ORTHO05D005871 2.1e-07 58.5 90 37.8
MELO3C008530.2 Cucumis melo HOM05D004641 ORTHO05D005871 2.7e-07 58.2 92 35.9
Hund25250 Selenicereus undatus HOM05D004641 ORTHO05D005871 2.7e-07 58.2 87 41.4
MBI05_g35443_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 3.6e-07 57.8 96 37.5
AUR62028790 Chenopodium quinoa HOM05D004641 ORTHO05D005871 4.6e-07 57.4 90 38.9
FAN07G1510 Fragaria x ananassa HOM05D004641 ORTHO05D005871 4.6e-07 57.4 87 41.4
FAN12G2116 Fragaria x ananassa HOM05D001668 ORTHO05D005871 4.6e-07 57.4 87 41.4
FAN17G1817 Fragaria x ananassa HOM05D004641 ORTHO05D005871 4.6e-07 57.4 87 41.4
Pp3c13_2030 Physcomitrium patens HOM05D004641 ORTHO05D005871 4.6e-07 57.4 96 33.3
AagrBONN_evm.TU.Sc2ySwM_228.4149 Anthoceros agrestis HOM05D004641 ORTHO05D005871 7.9e-07 56.6 92 33.7
Sc11g0001860 Simmondsia chinensis HOM05D004641 ORTHO05D005871 1.0e-06 56.2 90 38.9
Ciclev10032310m.g Citrus clementina HOM05D004641 ORTHO05D005871 2.3e-06 55.1 90 34.4
arahy.Tifrunner.gnm1.ann1.ITG5Q4 Arachis hypogaea HOM05D004641 ORTHO05D005871 3.9e-06 54.3 82 40.2
CBR_g31088 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-06 54.3 89 36.0
SGA_v2.0_scaffold302G47825 Striga asiatica HOM05D004641 ORTHO05D005871 3.9e-06 54.3 82 39.0
Sed0002473 Sechium edule HOM05D004641 ORTHO05D005871 5.1e-06 53.9 98 35.7
MBI09_g01021_MAGBIO Magnolia biondii HOM05D004641 ORTHO05D005871 8.8e-06 53.1 86 37.2
Mapoly0064s0110 Marchantia polymorpha HOM05D004641 ORTHO05D005871 8.8e-06 53.1 89 32.6
SMO254G0019 Selaginella moellendorffii HOM05D004641 ORTHO05D005871 8.8e-06 53.1 57 45.6


User provided reference genes

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