Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p15930 Brassica napus HOM05D024281 ORTHO05D018754 2.4e-81 305.4 154 100.0
C02p26450 Brassica napus HOM05D001837 ORTHO05D018754 1.2e-48 196.8 138 76.8
C02p26410 Brassica napus HOM05D001837 ORTHO05D040916 3.7e-34 148.7 80 88.8
BolC2t08714H Brassica oleracea HOM05D001837 ORTHO05D040916 3.7e-34 148.7 80 88.8
BolC2t08720H Brassica oleracea HOM05D001837 ORTHO05D018754 1.3e-31 140.2 96 78.1
BcaC03g15087 Brassica carinata HOM05D001837 ORTHO05D018754 1.5e-27 126.7 90 76.7
BcaB03g14723 Brassica carinata HOM05D001837 ORTHO05D003156 4.4e-27 125.2 174 43.7
A07p35880 Brassica napus HOM05D001837 ORTHO05D003156 5.8e-27 124.8 102 62.7
BcaC08g46394 Brassica carinata HOM05D001837 ORTHO05D003156 7.6e-27 124.4 102 62.7
C06p40290 Brassica napus HOM05D001837 ORTHO05D003156 7.6e-27 124.4 102 62.7
BolC6t39401H Brassica oleracea HOM05D001837 ORTHO05D003156 7.6e-27 124.4 102 62.7
BraA07t31173Z Brassica rapa HOM05D001837 ORTHO05D003156 7.6e-27 124.4 102 62.7
Thhalv10018691m.g Eutrema salsugineum HOM05D001837 ORTHO05D003156 7.1e-25 117.9 100 57.0
Sp5g24670 Schrenkiella parvula HOM05D001837 ORTHO05D003156 7.1e-25 117.9 173 44.5
AL2G28680 Arabidopsis lyrata HOM05D001837 ORTHO05D003156 3.3e-22 109.0 102 54.9
AT1G69540 Arabidopsis thaliana HOM05D001837 ORTHO05D003156 8.1e-21 104.4 175 37.7
Carub.0002s1619 Capsella rubella HOM05D001837 ORTHO05D003156 1.7e-18 96.7 97 51.5
CARHR062500 Cardamine hirsuta HOM05D001837 ORTHO05D003156 2.9e-18 95.9 175 34.9
THA.LOC104822049 Tarenaya hassleriana HOM05D001837 ORTHO05D003156 2.7e-16 89.4 91 52.7
A02p15950 Brassica napus HOM05D024281 ORTHO05D018754 7.3e-14 81.3 48 79.2
BraA02t06654Z Brassica rapa HOM05D024281 ORTHO05D018754 7.3e-14 81.3 48 79.2
C02p26530 Brassica napus HOM05D024281 ORTHO05D018754 1.8e-12 76.6 48 77.1
Cpa.g.sc1.45 Carica papaya HOM05D001837 ORTHO05D003156 3.2e-09 65.9 89 39.3
TWI31G0386 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 4.6e-08 62.0 89 38.2
Glyma.07G228900 Glycine max HOM05D001837 ORTHO05D003156 6.0e-08 61.6 93 39.8
TWI75G0812 Tripterygium wilfordii HOM05D001837 ORTHO05D003156 7.9e-08 61.2 89 38.2
TAR374G0034 Trochodendron aralioides HOM05D001837 ORTHO05D003156 7.9e-08 61.2 89 34.8
Ca_12065_v3 Cicer arietinum L. HOM05D001837 ORTHO05D003156 1.8e-07 60.1 104 32.7
CiPaw.05G133000 Carya illinoinensis HOM05D001837 ORTHO05D003156 2.3e-07 59.7 86 36.0
CANSAT64G2867 Cannabis sativa HOM05D001837 ORTHO05D003156 8.7e-07 57.8 89 34.8
Atru.chr11.1764 Acer truncatum HOM05D001837 ORTHO05D003156 1.1e-06 57.4 89 36.0
Glyma.20G034000 Glycine max HOM05D001837 ORTHO05D003156 1.9e-06 56.6 93 38.7
MBI15_g02239_MAGBIO Magnolia biondii HOM05D001378 ORTHO05D001249 1.9e-06 56.6 74 33.8
Ciclev10031963m.g Citrus clementina HOM05D001837 ORTHO05D003156 3.3e-06 55.8 88 35.2
Dinv16662 Davidia involucrata HOM05D001837 ORTHO05D003156 3.3e-06 55.8 88 36.4
ClCG05G024160 Citrullus lanatus HOM05D001837 ORTHO05D003156 4.3e-06 55.5 89 37.1
Haze_11995 Corylus avellana HOM05D001837 ORTHO05D003156 5.6e-06 55.1 89 33.7
FAN17G3096 Fragaria x ananassa HOM05D001837 ORTHO05D003156 5.6e-06 55.1 89 34.8
MD16G1070700 Malus domestica HOM05D001837 ORTHO05D003156 5.6e-06 55.1 85 32.9
Potri.008G088200 Populus trichocarpa HOM05D001837 ORTHO05D003156 5.6e-06 55.1 89 37.1
RcHm_v2.0_Chr4g0439551 Rosa chinensis HOM05D001837 ORTHO05D003156 5.6e-06 55.1 89 33.7
Ca_18825_v3 Cicer arietinum L. HOM05D001837 ORTHO05D003156 7.4e-06 54.7 92 35.9
Duzib268G0595 Durio zibethinus HOM05D001837 ORTHO05D003156 7.4e-06 54.7 89 33.7
Psat2g117920 Pisum sativum HOM05D001837 ORTHO05D003156 7.4e-06 54.7 87 31.0
BcaC04g21508 Brassica carinata HOM05D001837 ORTHO05D003156 9.6e-06 54.3 94 36.2
C09p30950 Brassica napus HOM05D001837 ORTHO05D003156 9.6e-06 54.3 94 36.2
FvH4_4g31160 Fragaria vesca HOM05D001837 ORTHO05D003156 9.6e-06 54.3 89 32.6


User provided reference genes

Program Settings