Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p15210 Brassica napus HOM05D006290 ORTHO05D007734 7.3e-57 223.8 123 100.0
BraA02t06584Z Brassica rapa HOM05D006290 ORTHO05D007734 1.4e-55 219.5 123 97.6
C02p25020 Brassica napus HOM05D006290 ORTHO05D007734 3.4e-54 214.9 123 95.9
BolC2t08586H Brassica oleracea HOM05D006290 ORTHO05D007734 1.7e-53 212.6 123 95.1
BcaC03g14971 Brassica carinata HOM05D006290 ORTHO05D007734 1.2e-51 206.5 123 94.3
BcaB05g24400 Brassica carinata HOM05D006290 ORTHO05D007734 6.6e-50 200.7 124 90.3
C06p37490 Brassica napus HOM05D006290 ORTHO05D007734 3.6e-48 194.9 117 90.6
BolC6t38851H Brassica oleracea HOM05D006290 ORTHO05D007734 3.6e-48 194.9 117 90.6
BraA07t30820Z Brassica rapa HOM05D006290 ORTHO05D007734 3.6e-48 194.9 117 90.6
A07p31920 Brassica napus HOM05D006290 ORTHO05D007734 1.1e-47 193.4 117 89.7
Sp5g23690 Schrenkiella parvula HOM05D006290 ORTHO05D007734 6.9e-47 190.7 121 90.1
BcaC08g45955 Brassica carinata HOM05D006290 ORTHO05D007734 5.8e-46 187.6 117 88.9
BcaB03g15431 Brassica carinata HOM05D006290 ORTHO05D007734 8.4e-45 183.7 118 88.1
Thhalv10019326m.g Eutrema salsugineum HOM05D006290 ORTHO05D007734 2.7e-43 178.7 117 87.2
AL2G27490 Arabidopsis lyrata HOM05D006290 ORTHO05D007734 6.7e-42 174.1 121 81.0
AT1G68585 Arabidopsis thaliana HOM05D006290 ORTHO05D007734 6.2e-40 167.5 118 81.4
Carub.0002s1512 Capsella rubella HOM05D006290 ORTHO05D007734 1.5e-38 162.9 116 80.2
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 7.9e-35 150.6 120 72.5
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 3.4e-30 135.2 119 67.2
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 1.3e-29 133.3 101 76.2
C06p41250 Brassica napus HOM05D006290 ORTHO05D007734 1.2e-19 100.1 61 86.9
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 5.7e-17 91.3 97 55.7
BcaC08g45952 Brassica carinata HOM05D006290 ORTHO05D007734 7.4e-17 90.9 60 90.0
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 1.1e-15 87.0 105 50.5
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 1.2e-14 83.6 105 50.5
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.2e-14 83.6 97 53.6
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 1.5e-14 83.2 80 52.5
Hma1.2p1_3293F.1_g334960 Hydrangea macrophylla HOM05D006290 ORTHO05D007734 2.0e-14 82.8 106 46.2
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 2.6e-14 82.4 62 71.0
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 2.6e-14 82.4 103 49.5
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 3.4e-14 82.0 96 51.0
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 3.4e-14 82.0 82 54.9
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 4.5e-14 81.6 105 49.5
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 5.9e-14 81.3 104 52.9
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 5.9e-14 81.3 66 63.6
Oeu033294.1 Olea europaea HOM05D006290 ORTHO05D007734 7.7e-14 80.9 68 52.9
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.3e-13 80.1 93 53.8
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 1.7e-13 79.7 99 48.5
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.9e-13 79.0 83 56.6
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.9e-13 79.0 83 56.6
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 2.9e-13 79.0 83 56.6
Nitab4.5_0001914g0020 Nicotiana tabacum HOM05D006290 ORTHO05D007734 2.9e-13 79.0 61 60.7
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 3.8e-13 78.6 72 58.3
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 3.8e-13 78.6 65 58.5
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 6.5e-13 77.8 96 47.9
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 6.5e-13 77.8 105 47.6
GSVIVG01011914001 Vitis vinifera HOM05D006290 ORTHO05D007734 6.5e-13 77.8 76 56.6
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 1.4e-12 76.6 61 60.7
vmacro10549 Vaccinium macrocarpon HOM05D006290 ORTHO05D007734 1.4e-12 76.6 58 65.5
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 1.9e-12 76.3 83 50.6
SGA_v2.0_scaffold124G33547 Striga asiatica HOM05D006290 ORTHO05D007734 1.9e-12 76.3 84 48.8
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 1.9e-12 76.3 95 50.5
MSTRG.13517 Avicennia marina HOM05D006290 ORTHO05D007734 2.5e-12 75.9 64 54.7
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.5e-12 75.9 66 62.1
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.5e-12 75.9 66 62.1
Lj5g0001389 Lotus japonicus HOM05D006290 ORTHO05D007734 2.5e-12 75.9 66 57.6
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 3.2e-12 75.5 70 62.9
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 3.2e-12 75.5 68 55.9
Medtr1g111150 Medicago truncatula HOM05D006290 ORTHO05D007734 3.2e-12 75.5 68 58.8
DCAR_007237 Daucus carota HOM05D006290 ORTHO05D007734 7.2e-12 74.3 60 65.0
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 9.4e-12 73.9 57 63.2
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 9.4e-12 73.9 83 51.8
MSTRG.826 Avicennia marina HOM05D006290 ORTHO05D007734 1.2e-11 73.6 91 44.0
Oeu020586.1 Olea europaea HOM05D006290 ORTHO05D007734 1.2e-11 73.6 72 52.8
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 1.6e-11 73.2 92 51.1
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 2.7e-11 72.4 93 52.7
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 2.7e-11 72.4 57 61.4
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 2.7e-11 72.4 71 54.9
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 4.7e-11 71.6 67 59.7
TPR.G38332 Trifolium pratense HOM05D006290 ORTHO05D007734 6.1e-11 71.2 57 61.4
arahy.Tifrunner.gnm1.ann1.89WS3K Arachis hypogaea HOM05D006290 ORTHO05D007734 7.9e-11 70.9 69 59.4
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 1.0e-10 70.5 105 46.7
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 1.0e-10 70.5 60 56.7
arahy.Tifrunner.gnm1.ann1.N6V5UD Arachis hypogaea HOM05D006290 ORTHO05D007734 1.4e-10 70.1 69 59.4
Manes.06G069950 Manihot esculenta HOM05D006290 ORTHO05D007734 2.3e-10 69.3 75 54.7
Nitab4.5_0003285g0030 Nicotiana tabacum HOM05D006290 ORTHO05D007734 2.3e-10 69.3 106 38.7
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 3.0e-10 68.9 57 57.9
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 3.9e-10 68.6 67 55.2
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 5.1e-10 68.2 68 50.0
TPR.G26319 Trifolium pratense HOM05D006290 ORTHO05D007734 5.1e-10 68.2 81 50.6
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 6.7e-10 67.8 62 54.8
Lalb_Chr17g0342051 Lupinus albus HOM05D006290 ORTHO05D007734 6.7e-10 67.8 57 59.6
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 6.7e-10 67.8 74 50.0
Medtr5g055200 Medicago truncatula HOM05D006290 ORTHO05D007734 6.7e-10 67.8 57 59.6
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 8.8e-10 67.4 62 51.6
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 1.1e-09 67.0 51 64.7
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 2.0e-09 66.2 65 49.2
HanXRQChr17g0567961 Helianthus annuus HOM05D006290 ORTHO05D007734 2.0e-09 66.2 116 37.1
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 2.0e-09 66.2 57 57.9
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 2.6e-09 65.9 77 49.4
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 2.6e-09 65.9 114 43.9
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 3.3e-09 65.5 98 39.8
Sc14g0007550 Simmondsia chinensis HOM05D006290 ORTHO05D007734 3.3e-09 65.5 67 52.2
Glyma.08G263700 Glycine max HOM05D006290 ORTHO05D007734 4.4e-09 65.1 57 56.1
unitig_26.g10264 Utricularia gibba HOM05D000483 ORTHO05D000158 4.4e-09 65.1 60 51.7
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 5.7e-09 64.7 79 50.6
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 9.7e-09 63.9 70 50.0
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 1.3e-08 63.5 74 47.3
ECA234G1725 Erigeron canadensis HOM05D006290 ORTHO05D007734 1.3e-08 63.5 65 47.7
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 1.3e-08 63.5 79 48.1
HanXRQChr16g0529651 Helianthus annuus HOM05D006290 ORTHO05D007734 2.2e-08 62.8 112 36.6
Lsat_1_v5_gn_4_18480 Lactuca sativa HOM05D006290 ORTHO05D007734 3.7e-08 62.0 86 39.5
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 4.8e-08 61.6 69 52.2
CiPaw.16G064000 Carya illinoinensis HOM05D006290 ORTHO05D007734 4.8e-08 61.6 45 64.4
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 4.8e-08 61.6 78 48.7
Solyc05g150121.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 4.8e-08 61.6 61 54.1
FAN12G1280 Fragaria x ananassa HOM05D006290 ORTHO05D007734 1.8e-07 59.7 129 38.0
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 3.1e-07 58.9 141 35.5
MBI12_g30235_MAGBIO Magnolia biondii HOM05D006290 ORTHO05D007734 3.1e-07 58.9 64 50.0
MELO3C012234.2 Cucumis melo HOM05D006290 ORTHO05D007734 9.1e-07 57.4 41 65.9
MD16G1044400 Malus domestica HOM05D006290 ORTHO05D007734 1.2e-06 57.0 44 61.4
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 1.5e-06 56.6 139 36.0
HanXRQChr15g0477181 Helianthus annuus HOM05D006290 ORTHO05D007734 2.6e-06 55.8 87 36.8
HanXRQChr17g0552191 Helianthus annuus HOM05D006290 ORTHO05D007734 2.6e-06 55.8 69 44.9
ECA246G4651 Erigeron canadensis HOM05D006290 ORTHO05D007734 3.4e-06 55.5 57 43.9
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 4.5e-06 55.1 58 50.0


User provided reference genes

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